RNA–Protein interactions for RNA: ENST00000429490.5

SGMS1-203, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-203ENST00000429490 FGFR2P21802 821 aa15.13■□□□□ 0.01
SGMS1-203ENST00000429490 PPP1R2P41236 205 aa15.13■□□□□ 0.01
SGMS1-203ENST00000429490 CYP4A11Q02928 519 aa15.13■□□□□ 0.01
SGMS1-203ENST00000429490 IFI16Q16666 785 aaKnown RBP15.13■□□□□ 0.01
SGMS1-203ENST00000429490 SH3RF1Q7Z6J0 888 aa15.13■□□□□ 0.01
SGMS1-203ENST00000429490 SH3RF3Q8TEJ3 882 aaPredicted RBP15.13■□□□□ 0.01
SGMS1-203ENST00000429490 RPGRQ92834 1020 aaKnown RBP15.13■□□□□ 0.01
SGMS1-203ENST00000429490 PCDHA6Q9UN73 950 aa15.13■□□□□ 0.01
SGMS1-203ENST00000429490 PCDHA8Q9Y5H6 950 aa15.13■□□□□ 0.01
SGMS1-203ENST00000429490 SYF2O95926 243 aaKnown RBP15.13■□□□□ 0.01
SGMS1-203ENST00000429490 IL17AQ16552 155 aa15.13■□□□□ 0.01
SGMS1-203ENST00000429490 MMS22LQ6ZRQ5 1243 aa15.13■□□□□ 0.01
SGMS1-203ENST00000429490 UBR1Q8IWV7 1749 aa15.13■□□□□ 0.01
SGMS1-203ENST00000429490 FRMD3A2A2Y4 597 aa15.12■□□□□ 0.01
SGMS1-203ENST00000429490 MEIS1O00470 390 aa15.12■□□□□ 0.01
SGMS1-203ENST00000429490 GNPATO15228 680 aa15.12■□□□□ 0.01
SGMS1-203ENST00000429490 CHMP2AO43633 222 aa15.12■□□□□ 0.01
SGMS1-203ENST00000429490 BUB1BO60566 1050 aaPredicted RBP15.12■□□□□ 0.01
SGMS1-203ENST00000429490 GBP2P32456 591 aaPredicted RBP15.12■□□□□ 0.01
SGMS1-203ENST00000429490 EMBQ6PCB8 327 aa15.12■□□□□ 0.01
SGMS1-203ENST00000429490 WDR59Q6PJI9 974 aa15.12■□□□□ 0.01
SGMS1-203ENST00000429490 APTXQ7Z2E3 356 aaKnown RBP15.12■□□□□ 0.01
SGMS1-203ENST00000429490 GIMAP8Q8ND71 665 aaPredicted RBP15.12■□□□□ 0.01
SGMS1-203ENST00000429490 ZIM3Q96PE6 472 aa15.12■□□□□ 0.01
SGMS1-203ENST00000429490 ADAMTS3O15072 1205 aa15.12■□□□□ 0.01
SGMS1-203ENST00000429490 TDP2O95551 362 aa15.12■□□□□ 0.01
SGMS1-203ENST00000429490 MSL1Q68DK7 614 aa15.12■□□□□ 0.01
SGMS1-203ENST00000429490 TTI2Q6NXR4 508 aa15.12■□□□□ 0.01
SGMS1-203ENST00000429490 MAEAQ7L5Y9 396 aa15.12■□□□□ 0.01
SGMS1-203ENST00000429490 DDX42Q86XP3 938 aaKnown RBP eCLIP15.12■□□□□ 0.01
SGMS1-203ENST00000429490 ZNF219Q9P2Y4 722 aaPredicted RBP15.12■□□□□ 0.01
SGMS1-203ENST00000429490 BAIAP2L1Q9UHR4 511 aa15.12■□□□□ 0.01
SGMS1-203ENST00000429490 PLAAQ9Y263 795 aa15.12■□□□□ 0.01
SGMS1-203ENST00000429490 PBX1P40424 430 aa15.12■□□□□ 0.01
SGMS1-203ENST00000429490 IFNAR2P48551 515 aa15.12■□□□□ 0.01
SGMS1-203ENST00000429490 GSTO1P78417 241 aa15.12■□□□□ 0.01
SGMS1-203ENST00000429490 FKBP3Q00688 224 aaKnown RBP15.12■□□□□ 0.01
SGMS1-203ENST00000429490 ARHGAP44Q17R89 818 aa15.12■□□□□ 0.01
SGMS1-203ENST00000429490 SYCP3Q8IZU3 236 aa15.12■□□□□ 0.01
SGMS1-203ENST00000429490 SPATA20Q8TB22 786 aa15.12■□□□□ 0.01
SGMS1-203ENST00000429490 DDX47Q9H0S4 455 aaKnown RBP15.12■□□□□ 0.01
SGMS1-203ENST00000429490 VIPAS39Q9H9C1 493 aa15.12■□□□□ 0.01
SGMS1-203ENST00000429490 PDS5AQ29RF7 1337 aaKnown RBP15.12■□□□□ 0.01
SGMS1-203ENST00000429490 RHOBTB3O94955 611 aa15.11■□□□□ 0.01
SGMS1-203ENST00000429490 RCAN1P53805 252 aa15.11■□□□□ 0.01
SGMS1-203ENST00000429490 CLEC10AQ8IUN9 316 aa15.11■□□□□ 0.01
SGMS1-203ENST00000429490 MARCH10Q8NA82 808 aaPredicted RBP15.11■□□□□ 0.01
SGMS1-203ENST00000429490 MGARPQ8TDB4 240 aa15.11■□□□□ 0.01
SGMS1-203ENST00000429490 LRRC45Q96CN5 670 aa15.11■□□□□ 0.01
SGMS1-203ENST00000429490 DNAJC7Q99615 494 aa15.11■□□□□ 0.01
SGMS1-203ENST00000429490 NOVA2Q9UNW9 492 aaKnown RBP15.11■□□□□ 0.01
SGMS1-203ENST00000429490 ATP8A1Q9Y2Q0 1164 aa15.11■□□□□ 0.01
SGMS1-203ENST00000429490 ZNF804BA4D1E1 1349 aa15.11■□□□□ 0.01
SGMS1-203ENST00000429490 GSTTP1A0A1W2PQM5 241 aa15.11■□□□□ 0.01
SGMS1-203ENST00000429490 TARSL2A2RTX5 802 aaKnown RBP15.11■□□□□ 0.01
SGMS1-203ENST00000429490 MYO1FO00160 1098 aa15.11■□□□□ 0.01
SGMS1-203ENST00000429490 ACTN3Q08043 901 aaPredicted RBP15.11■□□□□ 0.01
SGMS1-203ENST00000429490 SF3B2Q13435 895 aaKnown RBP15.11■□□□□ 0.01
SGMS1-203ENST00000429490 NSUN4Q96CB9 384 aaKnown RBP15.11■□□□□ 0.01
SGMS1-203ENST00000429490 SH2D4AQ9H788 454 aa15.11■□□□□ 0.01
SGMS1-203ENST00000429490 ARHGAP20Q9P2F6 1191 aa15.11■□□□□ 0.01
SGMS1-203ENST00000429490 RIC1Q4ADV7 1423 aa15.11■□□□□ 0.01
SGMS1-203ENST00000429490 LOC102724159A0A0B4J2E5 919 aa15.11■□□□□ 0.01
SGMS1-203ENST00000429490 NR2F2P24468 414 aa15.11■□□□□ 0.01
SGMS1-203ENST00000429490 PABPC4Q13310 644 aaKnown RBP eCLIP15.11■□□□□ 0.01
SGMS1-203ENST00000429490 PWP2Q15269 919 aaKnown RBP15.11■□□□□ 0.01
SGMS1-203ENST00000429490 FAM83BQ5T0W9 1011 aa15.11■□□□□ 0.01
SGMS1-203ENST00000429490 IRF2BP1Q8IU81 584 aa15.11■□□□□ 0.01
SGMS1-203ENST00000429490 PAIP2Q9BPZ3 127 aaKnown RBP15.11■□□□□ 0.01
SGMS1-203ENST00000429490 RIOK1Q9BRS2 568 aaKnown RBP15.11■□□□□ 0.01
SGMS1-203ENST00000429490 ANKRD2Q9GZV1 360 aa15.11■□□□□ 0.01
SGMS1-203ENST00000429490 COL4A3BPQ9Y5P4 624 aa15.11■□□□□ 0.01
SGMS1-203ENST00000429490 LTN1O94822 1766 aa15.11■□□□□ 0.01
SGMS1-203ENST00000429490 GOLGA6L10A0A0M3HER8 536 aa15.1■□□□□ 0.01
SGMS1-203ENST00000429490 EIF3HO15372 352 aaKnown RBP eCLIP15.1■□□□□ 0.01
SGMS1-203ENST00000429490 UFL1O94874 794 aa15.1■□□□□ 0.01
SGMS1-203ENST00000429490 AMPD2Q01433 879 aa15.1■□□□□ 0.01
SGMS1-203ENST00000429490 PAPD7Q5XG87 772 aaKnown RBP15.1■□□□□ 0.01
SGMS1-203ENST00000429490 ZNF34Q8IZ26 560 aa15.1■□□□□ 0.01
SGMS1-203ENST00000429490 SRP68Q9UHB9 627 aaKnown RBP15.1■□□□□ 0.01
SGMS1-203ENST00000429490 CLIC2O15247 247 aa15.1■□□□□ 0.01
SGMS1-203ENST00000429490 USH1GQ495M9 461 aa15.1■□□□□ 0.01
SGMS1-203ENST00000429490 AK8Q96MA6 479 aa15.1■□□□□ 0.01
SGMS1-203ENST00000429490 TSKSQ9UJT2 592 aa15.1■□□□□ 0.01
SGMS1-203ENST00000429490 NFAT5O94916 1531 aa15.1■□□□□ 0.01
SGMS1-203ENST00000429490 MYMKA6NI61 221 aa15.1■□□□□ 0.01
SGMS1-203ENST00000429490 GCNT3O95395 438 aa15.1■□□□□ 0.01
SGMS1-203ENST00000429490 PCP11498 1178 aaKnown RBP15.1■□□□□ 0.01
SGMS1-203ENST00000429490 BTDP43251 543 aa15.1■□□□□ 0.01
SGMS1-203ENST00000429490 MRPL12P52815 198 aaKnown RBP15.1■□□□□ 0.01
SGMS1-203ENST00000429490 KCNB1Q14721 858 aa15.1■□□□□ 0.01
SGMS1-203ENST00000429490 CCDC26Q8TAB7 109 aa15.1■□□□□ 0.01
SGMS1-203ENST00000429490 TBC1D31Q96DN5 1066 aa15.1■□□□□ 0.01
SGMS1-203ENST00000429490 MTA3Q9BTC8 594 aa15.1■□□□□ 0.01
SGMS1-203ENST00000429490 ARMCX3Q9UH62 379 aaPredicted RBP15.1■□□□□ 0.01
SGMS1-203ENST00000429490 UTP11Q9Y3A2 253 aaKnown RBP15.1■□□□□ 0.01
SGMS1-203ENST00000429490 LRRC10BA6NIK2 292 aa15.09■□□□□ 0.01
SGMS1-203ENST00000429490 EPHB6O15197 1021 aa15.09■□□□□ 0.01
SGMS1-203ENST00000429490 RPSAP08865 295 aaKnown RBP15.09■□□□□ 0.01
SGMS1-203ENST00000429490 RFC4P35249 363 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms