RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 TAL1P17542 331 aaPredicted RBP12.82□□□□□ -0.36
CECR3-201ENST00000428828 GPAT2Q6NUI2 795 aa12.82□□□□□ -0.36
CECR3-201ENST00000428828 RSRC2Q7L4I2 434 aaKnown RBP12.82□□□□□ -0.36
CECR3-201ENST00000428828 LRRN4CLQ8ND94 238 aa12.82□□□□□ -0.36
CECR3-201ENST00000428828 HHIPL1Q96JK4 782 aa12.82□□□□□ -0.36
CECR3-201ENST00000428828 CAPNS2Q96L46 248 aa12.82□□□□□ -0.36
CECR3-201ENST00000428828 RIOX1Q9H6W3 641 aa12.82□□□□□ -0.36
CECR3-201ENST00000428828 STK36Q9NRP7 1315 aa12.81□□□□□ -0.36
CECR3-201ENST00000428828 RASSF10A6NK89 507 aa12.81□□□□□ -0.36
CECR3-201ENST00000428828 PDHXO00330 501 aa12.81□□□□□ -0.36
CECR3-201ENST00000428828 PPP1R12AO14974 1030 aaPredicted RBP12.81□□□□□ -0.36
CECR3-201ENST00000428828 PRPF3O43395 683 aaKnown RBP12.81□□□□□ -0.36
CECR3-201ENST00000428828 AOC2O75106 756 aa12.81□□□□□ -0.36
CECR3-201ENST00000428828 EIF3JO75822 258 aaKnown RBP12.81□□□□□ -0.36
CECR3-201ENST00000428828 SMC2O95347 1197 aa12.81□□□□□ -0.36
CECR3-201ENST00000428828 ARID5BQ14865 1188 aa12.81□□□□□ -0.36
CECR3-201ENST00000428828 QRICH1Q2TAL8 776 aa12.81□□□□□ -0.36
CECR3-201ENST00000428828 BTNL9Q6UXG8 535 aa12.81□□□□□ -0.36
CECR3-201ENST00000428828 HEATR3Q7Z4Q2 680 aa12.81□□□□□ -0.36
CECR3-201ENST00000428828 CKAP2LQ8IYA6 745 aa12.81□□□□□ -0.36
CECR3-201ENST00000428828 PRPF38AQ8NAV1 312 aaKnown RBP12.81□□□□□ -0.36
CECR3-201ENST00000428828 ASCC2Q9H1I8 757 aaPredicted RBP12.81□□□□□ -0.36
CECR3-201ENST00000428828 PPP1R9AQ9ULJ8 1098 aa12.81□□□□□ -0.36
CECR3-201ENST00000428828 CTDP1Q9Y5B0 961 aaPredicted RBP12.81□□□□□ -0.36
CECR3-201ENST00000428828 MYH15Q9Y2K3 1946 aa12.81□□□□□ -0.36
CECR3-201ENST00000428828 GOLGA6L4A6NEF3 574 aa12.8□□□□□ -0.36
CECR3-201ENST00000428828 MANSC4A6NHS7 340 aaPredicted RBP12.8□□□□□ -0.36
CECR3-201ENST00000428828 POTEB2H3BUK9 544 aa12.8□□□□□ -0.36
CECR3-201ENST00000428828 PEX10O60683 326 aa12.8□□□□□ -0.36
CECR3-201ENST00000428828 DEXIO95424 95 aa12.8□□□□□ -0.36
CECR3-201ENST00000428828 CYP2C8P10632 490 aa12.8□□□□□ -0.36
CECR3-201ENST00000428828 COG2Q14746 738 aa12.8□□□□□ -0.36
CECR3-201ENST00000428828 USH1GQ495M9 461 aa12.8□□□□□ -0.36
CECR3-201ENST00000428828 PTPN18Q99952 460 aa12.8□□□□□ -0.36
CECR3-201ENST00000428828 ALG1Q9BT22 464 aa12.8□□□□□ -0.36
CECR3-201ENST00000428828 GJB4Q9NTQ9 266 aa12.8□□□□□ -0.36
CECR3-201ENST00000428828 SPDYE16A6NNV3 312 aaPredicted RBP12.8□□□□□ -0.36
CECR3-201ENST00000428828 ZBTB5O15062 677 aa12.8□□□□□ -0.36
CECR3-201ENST00000428828 PPFIA4O75335 1185 aa12.8□□□□□ -0.36
CECR3-201ENST00000428828 SEC31AO94979 1220 aaKnown RBP12.8□□□□□ -0.36
CECR3-201ENST00000428828 SCG2P13521 617 aa12.8□□□□□ -0.36
CECR3-201ENST00000428828 OSBPP22059 807 aa12.8□□□□□ -0.36
CECR3-201ENST00000428828 DSG3P32926 999 aa12.8□□□□□ -0.36
CECR3-201ENST00000428828 GUCY1B3Q02153 619 aa12.8□□□□□ -0.36
CECR3-201ENST00000428828 PABPC4Q13310 644 aaKnown RBP eCLIP12.8□□□□□ -0.36
CECR3-201ENST00000428828 PKN1Q16512 942 aa12.8□□□□□ -0.36
CECR3-201ENST00000428828 CAMK4Q16566 473 aa12.8□□□□□ -0.36
CECR3-201ENST00000428828 CPXCR1Q8N123 301 aa12.8□□□□□ -0.36
CECR3-201ENST00000428828 P2RX7Q99572 595 aaKnown RBP12.8□□□□□ -0.36
CECR3-201ENST00000428828 PAGR1Q9BTK6 254 aa12.8□□□□□ -0.36
CECR3-201ENST00000428828 VPS54Q9P1Q0 977 aa12.8□□□□□ -0.36
CECR3-201ENST00000428828 PNMA6FA0A0J9YX94 578 aa12.79□□□□□ -0.36
CECR3-201ENST00000428828 GOLGA6L9A6NEM1 432 aa12.79□□□□□ -0.36
CECR3-201ENST00000428828 IGF2BP3O00425 579 aaKnown RBP eCLIP12.79□□□□□ -0.36
CECR3-201ENST00000428828 PLA2G6O60733 806 aa12.79□□□□□ -0.36
CECR3-201ENST00000428828 PPP1R11O60927 126 aaPredicted RBP12.79□□□□□ -0.36
CECR3-201ENST00000428828 TUBBP07437 444 aa12.79□□□□□ -0.36
CECR3-201ENST00000428828 SMARCA1P28370 1054 aa12.79□□□□□ -0.36
CECR3-201ENST00000428828 HOXA7P31268 230 aaPredicted RBP12.79□□□□□ -0.36
CECR3-201ENST00000428828 KIF23Q02241 960 aaPredicted RBP12.79□□□□□ -0.36
CECR3-201ENST00000428828 PLS1Q14651 629 aa12.79□□□□□ -0.36
CECR3-201ENST00000428828 PFKFB3Q16875 520 aaPredicted RBP12.79□□□□□ -0.36
CECR3-201ENST00000428828 WWC2Q6AWC2 1192 aa12.79□□□□□ -0.36
CECR3-201ENST00000428828 OTUD7BQ6GQQ9 843 aa12.79□□□□□ -0.36
CECR3-201ENST00000428828 TRIM65Q6PJ69 517 aa12.79□□□□□ -0.36
CECR3-201ENST00000428828 ANKRD23Q86SG2 305 aa12.79□□□□□ -0.36
CECR3-201ENST00000428828 COA7Q96BR5 231 aa12.79□□□□□ -0.36
CECR3-201ENST00000428828 RANBP17Q9H2T7 1088 aaKnown RBP12.79□□□□□ -0.36
CECR3-201ENST00000428828 RAVER2Q9HCJ3 691 aaKnown RBP12.79□□□□□ -0.36
CECR3-201ENST00000428828 ANO10Q9NW15 660 aa12.79□□□□□ -0.36
CECR3-201ENST00000428828 PCNTO95613 3336 aa12.79□□□□□ -0.36
CECR3-201ENST00000428828 H3BQF6 201 aa12.78□□□□□ -0.36
CECR3-201ENST00000428828 VWA5AO00534 786 aa12.78□□□□□ -0.36
CECR3-201ENST00000428828 ZBED4O75132 1171 aa12.78□□□□□ -0.36
CECR3-201ENST00000428828 HERVK_113P62684 666 aa12.78□□□□□ -0.36
CECR3-201ENST00000428828 SREBF2Q12772 1141 aa12.78□□□□□ -0.36
CECR3-201ENST00000428828 LONRF2Q1L5Z9 754 aa12.78□□□□□ -0.36
CECR3-201ENST00000428828 DNAJC21Q5F1R6 531 aaKnown RBP12.78□□□□□ -0.36
CECR3-201ENST00000428828 LARP1BQ659C4 914 aaKnown RBP12.78□□□□□ -0.36
CECR3-201ENST00000428828 SMCR8Q8TEV9 937 aaPredicted RBP12.78□□□□□ -0.36
CECR3-201ENST00000428828 LEO1Q8WVC0 666 aaPredicted RBP12.78□□□□□ -0.36
CECR3-201ENST00000428828 WASF1Q92558 559 aa12.78□□□□□ -0.36
CECR3-201ENST00000428828 BPIFA3Q9BQP9 254 aa12.78□□□□□ -0.36
CECR3-201ENST00000428828 NAT10Q9H0A0 1025 aaKnown RBP12.78□□□□□ -0.36
CECR3-201ENST00000428828 PNMA3Q9UL41 463 aa12.78□□□□□ -0.36
CECR3-201ENST00000428828 TCHHQ07283 1943 aa12.78□□□□□ -0.36
CECR3-201ENST00000428828 VPS37CA5D8V6 355 aaPredicted RBP12.78□□□□□ -0.36
CECR3-201ENST00000428828 BECN2A8MW95 431 aa12.78□□□□□ -0.36
CECR3-201ENST00000428828 SFPQP23246 707 aaKnown RBP eCLIP12.78□□□□□ -0.36
CECR3-201ENST00000428828 NAPAP54920 295 aa12.78□□□□□ -0.36
CECR3-201ENST00000428828 NOGQ13253 232 aa12.78□□□□□ -0.36
CECR3-201ENST00000428828 HDXQ7Z353 690 aa12.78□□□□□ -0.36
CECR3-201ENST00000428828 FBXO11Q86XK2 927 aa12.78□□□□□ -0.36
CECR3-201ENST00000428828 MTMR8Q96EF0 704 aa12.78□□□□□ -0.36
CECR3-201ENST00000428828 C8orf76Q96K31 380 aa12.78□□□□□ -0.36
CECR3-201ENST00000428828 SPATA32Q96LK8 384 aa12.78□□□□□ -0.36
CECR3-201ENST00000428828 AGBL1Q96MI9 1066 aa12.78□□□□□ -0.36
CECR3-201ENST00000428828 SLC38A10Q9HBR0 1119 aa12.78□□□□□ -0.36
CECR3-201ENST00000428828 HOMER2Q9NSB8 354 aa12.78□□□□□ -0.36
CECR3-201ENST00000428828 HOXC10Q9NYD6 342 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms