RNA–Protein interactions for RNA: ENST00000428704.1

HDAC1-202, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 664 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-202ENST00000428704 GNASQ5JWF2 1037 aa10.11□□□□□ -0.79
HDAC1-202ENST00000428704 ZNF589Q86UQ0 364 aaPredicted RBP10.11□□□□□ -0.79
HDAC1-202ENST00000428704 TTC13Q8NBP0 860 aa10.11□□□□□ -0.79
HDAC1-202ENST00000428704 GDPD5Q8WTR4 605 aa10.11□□□□□ -0.79
HDAC1-202ENST00000428704 SCLYQ96I15 445 aa10.11□□□□□ -0.79
HDAC1-202ENST00000428704 SLC9A7Q96T83 725 aa10.11□□□□□ -0.79
HDAC1-202ENST00000428704 NOC4LQ9BVI4 516 aaKnown RBP10.11□□□□□ -0.79
HDAC1-202ENST00000428704 UPF3BQ9BZI7 483 aaKnown RBP10.11□□□□□ -0.79
HDAC1-202ENST00000428704 WNT8AQ9H1J5 351 aa10.11□□□□□ -0.79
HDAC1-202ENST00000428704 VCPKMTQ9H867 229 aa10.11□□□□□ -0.79
HDAC1-202ENST00000428704 ARHGEF10LQ9HCE6 1279 aa10.11□□□□□ -0.79
HDAC1-202ENST00000428704 FAM86C1Q9NVL1 165 aa10.11□□□□□ -0.79
HDAC1-202ENST00000428704 RABGEF1Q9UJ41 708 aa10.11□□□□□ -0.79
HDAC1-202ENST00000428704 DIS3Q9Y2L1 958 aaKnown RBP10.11□□□□□ -0.79
HDAC1-202ENST00000428704 ZFHX2Q9C0A1 2572 aaPredicted RBP10.11□□□□□ -0.79
HDAC1-202ENST00000428704 TRAK2O60296 914 aa10.1□□□□□ -0.79
HDAC1-202ENST00000428704 SLC25A27O95847 323 aa10.1□□□□□ -0.79
HDAC1-202ENST00000428704 ACTN1P12814 892 aa10.1□□□□□ -0.79
HDAC1-202ENST00000428704 PSMA5P28066 241 aa10.1□□□□□ -0.79
HDAC1-202ENST00000428704 PTH1RQ03431 593 aa10.1□□□□□ -0.79
HDAC1-202ENST00000428704 PPARAQ07869 468 aa10.1□□□□□ -0.79
HDAC1-202ENST00000428704 ZNF792Q3KQV3 632 aa10.1□□□□□ -0.79
HDAC1-202ENST00000428704 RNF20Q5VTR2 975 aa10.1□□□□□ -0.79
HDAC1-202ENST00000428704 PADI6Q6TGC4 694 aa10.1□□□□□ -0.79
HDAC1-202ENST00000428704 SPICE1Q8N0Z3 855 aa10.1□□□□□ -0.79
HDAC1-202ENST00000428704 ZSCAN31Q96LW9 406 aaPredicted RBP10.1□□□□□ -0.79
HDAC1-202ENST00000428704 NAPBQ9H115 298 aa10.1□□□□□ -0.79
HDAC1-202ENST00000428704 KANSL2Q9H9L4 492 aa10.1□□□□□ -0.79
HDAC1-202ENST00000428704 HELLSQ9NRZ9 838 aa10.1□□□□□ -0.79
HDAC1-202ENST00000428704 ISY1Q9ULR0 285 aaKnown RBP10.1□□□□□ -0.79
HDAC1-202ENST00000428704 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.1□□□□□ -0.79
HDAC1-202ENST00000428704 ZMYM6O95789 1325 aa10.09□□□□□ -0.79
HDAC1-202ENST00000428704 GBF1Q92538 1859 aa10.09□□□□□ -0.79
HDAC1-202ENST00000428704 BHMG1C9JSJ3 638 aaPredicted RBP10.09□□□□□ -0.79
HDAC1-202ENST00000428704 GOLGA6L22H0YM25 854 aa10.09□□□□□ -0.79
HDAC1-202ENST00000428704 WDR46O15213 610 aaKnown RBP10.09□□□□□ -0.79
HDAC1-202ENST00000428704 HRO43593 1189 aa10.09□□□□□ -0.79
HDAC1-202ENST00000428704 FLOT1O75955 427 aa10.09□□□□□ -0.79
HDAC1-202ENST00000428704 TCF15Q12870 199 aa10.09□□□□□ -0.79
HDAC1-202ENST00000428704 MCMDC2Q4G0Z9 681 aa10.09□□□□□ -0.79
HDAC1-202ENST00000428704 SPRED2Q7Z698 418 aa10.09□□□□□ -0.79
HDAC1-202ENST00000428704 DEFB128Q7Z7B8 93 aa10.09□□□□□ -0.79
HDAC1-202ENST00000428704 PACS2Q86VP3 889 aa10.09□□□□□ -0.79
HDAC1-202ENST00000428704 HERC6Q8IVU3 1022 aa10.09□□□□□ -0.79
HDAC1-202ENST00000428704 SUGP1Q8IWZ8 645 aaKnown RBP10.09□□□□□ -0.79
HDAC1-202ENST00000428704 PHOSPHO2Q8TCD6 241 aa10.09□□□□□ -0.79
HDAC1-202ENST00000428704 ATG4CQ96DT6 458 aa10.09□□□□□ -0.79
HDAC1-202ENST00000428704 NACAP1Q9BZK3 213 aa10.09□□□□□ -0.79
HDAC1-202ENST00000428704 SH2D4AQ9H788 454 aa10.09□□□□□ -0.79
HDAC1-202ENST00000428704 MKNK2Q9HBH9 465 aa10.09□□□□□ -0.79
HDAC1-202ENST00000428704 FBXO28Q9NVF7 368 aa10.09□□□□□ -0.79
HDAC1-202ENST00000428704 KIAA1468Q9P260 1216 aa10.09□□□□□ -0.79
HDAC1-202ENST00000428704 LIMCH1Q9UPQ0 1083 aa10.09□□□□□ -0.79
HDAC1-202ENST00000428704 FAM50BQ9Y247 325 aa10.09□□□□□ -0.79
HDAC1-202ENST00000428704 RBM8AQ9Y5S9 174 aaKnown RBP10.09□□□□□ -0.79
HDAC1-202ENST00000428704 ZNF318Q5VUA4 2279 aa10.09□□□□□ -0.79
HDAC1-202ENST00000428704 ZNFX1Q9P2E3 1918 aaKnown RBP10.09□□□□□ -0.79
HDAC1-202ENST00000428704 H3BQ06 376 aaPredicted RBP10.08□□□□□ -0.8
HDAC1-202ENST00000428704 BAG4O95429 457 aaKnown RBP10.08□□□□□ -0.8
HDAC1-202ENST00000428704 GJA9P57773 515 aa10.08□□□□□ -0.8
HDAC1-202ENST00000428704 ZP2Q05996 745 aa10.08□□□□□ -0.8
HDAC1-202ENST00000428704 CTDSPL2Q05D32 466 aa10.08□□□□□ -0.8
HDAC1-202ENST00000428704 KRT32Q14532 448 aa10.08□□□□□ -0.8
HDAC1-202ENST00000428704 ALX1Q15699 326 aa10.08□□□□□ -0.8
HDAC1-202ENST00000428704 CREB3L3Q68CJ9 461 aa10.08□□□□□ -0.8
HDAC1-202ENST00000428704 RUFY3Q7L099 469 aa10.08□□□□□ -0.8
HDAC1-202ENST00000428704 CEP95Q96GE4 821 aa10.08□□□□□ -0.8
HDAC1-202ENST00000428704 TRPV6Q9H1D0 765 aa10.08□□□□□ -0.8
HDAC1-202ENST00000428704 INCENPQ9NQS7 918 aa10.08□□□□□ -0.8
HDAC1-202ENST00000428704 SH2B1Q9NRF2 756 aaPredicted RBP10.08□□□□□ -0.8
HDAC1-202ENST00000428704 NYAP2Q9P242 653 aa10.08□□□□□ -0.8
HDAC1-202ENST00000428704 PRKAG3Q9UGI9 489 aa10.08□□□□□ -0.8
HDAC1-202ENST00000428704 ANAPC4Q9UJX5 808 aa10.08□□□□□ -0.8
HDAC1-202ENST00000428704 CYP46A1Q9Y6A2 500 aa10.08□□□□□ -0.8
HDAC1-202ENST00000428704 SPTBN4Q9H254 2564 aa10.08□□□□□ -0.8
HDAC1-202ENST00000428704 SLC27A2O14975 620 aa10.07□□□□□ -0.8
HDAC1-202ENST00000428704 B4GALT4O60513 344 aa10.07□□□□□ -0.8
HDAC1-202ENST00000428704 CABYRO75952 493 aa10.07□□□□□ -0.8
HDAC1-202ENST00000428704 BRD1O95696 1058 aa10.07□□□□□ -0.8
HDAC1-202ENST00000428704 SNAI1O95863 264 aaPredicted RBP10.07□□□□□ -0.8
HDAC1-202ENST00000428704 FGAP02671 866 aa10.07□□□□□ -0.8
HDAC1-202ENST00000428704 FGRP09769 529 aa10.07□□□□□ -0.8
HDAC1-202ENST00000428704 HSPD1P10809 573 aaKnown RBP10.07□□□□□ -0.8
HDAC1-202ENST00000428704 FECHP22830 423 aa10.07□□□□□ -0.8
HDAC1-202ENST00000428704 ID4P47928 161 aa10.07□□□□□ -0.8
HDAC1-202ENST00000428704 AK2P54819 239 aa10.07□□□□□ -0.8
HDAC1-202ENST00000428704 BEX3Q00994 111 aa10.07□□□□□ -0.8
HDAC1-202ENST00000428704 ITGA7Q13683 1181 aa10.07□□□□□ -0.8
HDAC1-202ENST00000428704 TMEM132BQ14DG7 1078 aa10.07□□□□□ -0.8
HDAC1-202ENST00000428704 ANKRD1Q15327 319 aa10.07□□□□□ -0.8
HDAC1-202ENST00000428704 PKN1Q16512 942 aa10.07□□□□□ -0.8
HDAC1-202ENST00000428704 CXCL17Q6UXB2 119 aa10.07□□□□□ -0.8
HDAC1-202ENST00000428704 MSL3Q8N5Y2 521 aaKnown RBP10.07□□□□□ -0.8
HDAC1-202ENST00000428704 SLC43A3Q8NBI5 491 aa10.07□□□□□ -0.8
HDAC1-202ENST00000428704 NEDD1Q8NHV4 660 aa10.07□□□□□ -0.8
HDAC1-202ENST00000428704 ATOH1Q92858 354 aaPredicted RBP10.07□□□□□ -0.8
HDAC1-202ENST00000428704 VWCEQ96DN2 955 aa10.07□□□□□ -0.8
HDAC1-202ENST00000428704 AGBL1Q96MI9 1066 aa10.07□□□□□ -0.8
HDAC1-202ENST00000428704 NUP88Q99567 741 aaPredicted RBP10.07□□□□□ -0.8
HDAC1-202ENST00000428704 UPF3AQ9H1J1 476 aaKnown RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms