RNA–Protein interactions for RNA: ENST00000428494.6

GHDC-203, Transcript of GH3 domain containing, humanhuman

TSL 5 BASIC

Gene GHDC, Length 2,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-203ENST00000428494 COL22A1Q8NFW1 1626 aaPredicted RBP17.44■□□□□ 0.38
GHDC-203ENST00000428494 RREB1Q92766 1687 aa17.44■□□□□ 0.38
GHDC-203ENST00000428494 ESYT3A0FGR9 886 aa17.44■□□□□ 0.38
GHDC-203ENST00000428494 SLC37A4O43826 429 aa17.44■□□□□ 0.38
GHDC-203ENST00000428494 MAN2A1Q16706 1144 aa17.44■□□□□ 0.38
GHDC-203ENST00000428494 CAPS2Q9BXY5 557 aa17.44■□□□□ 0.38
GHDC-203ENST00000428494 STIM2Q9P246 746 aa17.44■□□□□ 0.38
GHDC-203ENST00000428494 HYOU1Q9Y4L1 999 aa17.44■□□□□ 0.38
GHDC-203ENST00000428494 CASZ1Q86V15 1759 aa17.44■□□□□ 0.38
GHDC-203ENST00000428494 LCA5LO95447 670 aa17.43■□□□□ 0.38
GHDC-203ENST00000428494 TTC31Q49AM3 519 aaPredicted RBP17.43■□□□□ 0.38
GHDC-203ENST00000428494 TTMPQ5BVD1 217 aa17.43■□□□□ 0.38
GHDC-203ENST00000428494 KLHDC7AQ5VTJ3 777 aa17.43■□□□□ 0.38
GHDC-203ENST00000428494 KCTD16Q68DU8 428 aa17.43■□□□□ 0.38
GHDC-203ENST00000428494 TDP2O95551 362 aa17.43■□□□□ 0.38
GHDC-203ENST00000428494 PRLRP16471 622 aa17.43■□□□□ 0.38
GHDC-203ENST00000428494 RNASE9P60153 205 aaKnown RBP17.43■□□□□ 0.38
GHDC-203ENST00000428494 KCNMA1Q12791 1236 aa17.43■□□□□ 0.38
GHDC-203ENST00000428494 ZNF572Q7Z3I7 529 aaPredicted RBP17.43■□□□□ 0.38
GHDC-203ENST00000428494 CACNA2D4Q7Z3S7 1137 aa17.43■□□□□ 0.38
GHDC-203ENST00000428494 SH2D3CQ8N5H7 860 aa17.43■□□□□ 0.38
GHDC-203ENST00000428494 BCAS4Q8TDM0 211 aa17.43■□□□□ 0.38
GHDC-203ENST00000428494 LARP4BQ92615 738 aaKnown RBP17.43■□□□□ 0.38
GHDC-203ENST00000428494 ALS2CR12Q96Q35 445 aa17.43■□□□□ 0.38
GHDC-203ENST00000428494 EDIL3O43854 480 aa17.42■□□□□ 0.38
GHDC-203ENST00000428494 GLI1P08151 1106 aa17.42■□□□□ 0.38
GHDC-203ENST00000428494 FAM153BP0C7A2 387 aa17.42■□□□□ 0.38
GHDC-203ENST00000428494 TCP1P17987 556 aaKnown RBP17.42■□□□□ 0.38
GHDC-203ENST00000428494 GNGT1P63211 74 aa17.42■□□□□ 0.38
GHDC-203ENST00000428494 ENOX2Q16206 610 aaKnown RBP17.42■□□□□ 0.38
GHDC-203ENST00000428494 KCTD19Q17RG1 926 aaPredicted RBP17.42■□□□□ 0.38
GHDC-203ENST00000428494 ASTE1Q2TB18 679 aaPredicted RBP17.42■□□□□ 0.38
GHDC-203ENST00000428494 FAM153CQ494X1 144 aa17.42■□□□□ 0.38
GHDC-203ENST00000428494 TDRD12Q587J7 1177 aaKnown RBP17.42■□□□□ 0.38
GHDC-203ENST00000428494 SLC10A5Q5PT55 438 aa17.42■□□□□ 0.38
GHDC-203ENST00000428494 SOGA3Q5TF21 947 aa17.42■□□□□ 0.38
GHDC-203ENST00000428494 HGSNATQ68CP4 663 aa17.42■□□□□ 0.38
GHDC-203ENST00000428494 UNC13DQ70J99 1090 aa17.42■□□□□ 0.38
GHDC-203ENST00000428494 COA7Q96BR5 231 aa17.42■□□□□ 0.38
GHDC-203ENST00000428494 ANKRD2Q9GZV1 360 aa17.42■□□□□ 0.38
GHDC-203ENST00000428494 FAM153AQ9UHL3 310 aa17.42■□□□□ 0.38
GHDC-203ENST00000428494 KRT14P02533 472 aa17.42■□□□□ 0.38
GHDC-203ENST00000428494 GNA11P29992 359 aa17.42■□□□□ 0.38
GHDC-203ENST00000428494 CARSP49589 748 aaKnown RBP17.42■□□□□ 0.38
GHDC-203ENST00000428494 PPFIA1Q13136 1202 aa17.42■□□□□ 0.38
GHDC-203ENST00000428494 CALCRLQ16602 461 aa17.42■□□□□ 0.38
GHDC-203ENST00000428494 C8orf74Q6P047 294 aa17.42■□□□□ 0.38
GHDC-203ENST00000428494 LRRC55Q6ZSA7 311 aa17.42■□□□□ 0.38
GHDC-203ENST00000428494 CCDC84Q86UT8 332 aaPredicted RBP17.42■□□□□ 0.38
GHDC-203ENST00000428494 NBPF5PQ86XG9 351 aaPredicted RBP17.42■□□□□ 0.38
GHDC-203ENST00000428494 CERS3Q8IU89 383 aa17.42■□□□□ 0.38
GHDC-203ENST00000428494 REXO1Q8N1G1 1221 aaKnown RBP17.42■□□□□ 0.38
GHDC-203ENST00000428494 MTMR9Q96QG7 549 aa17.42■□□□□ 0.38
GHDC-203ENST00000428494 EYA3Q99504 573 aa17.42■□□□□ 0.38
GHDC-203ENST00000428494 SH3GL2Q99962 352 aa17.42■□□□□ 0.38
GHDC-203ENST00000428494 SPZ1Q9BXG8 430 aa17.42■□□□□ 0.38
GHDC-203ENST00000428494 YY1AP1Q9H869 796 aa17.42■□□□□ 0.38
GHDC-203ENST00000428494 PACSIN2Q9UNF0 486 aaPredicted RBP17.42■□□□□ 0.38
GHDC-203ENST00000428494 SAMM50Q9Y512 469 aa17.42■□□□□ 0.38
GHDC-203ENST00000428494 CCDC88AQ3V6T2 1871 aa17.42■□□□□ 0.38
GHDC-203ENST00000428494 GRIN2DO15399 1336 aa17.41■□□□□ 0.38
GHDC-203ENST00000428494 USP17L5A8MUK1 530 aa17.41■□□□□ 0.38
GHDC-203ENST00000428494 CDK8P49336 464 aa17.41■□□□□ 0.38
GHDC-203ENST00000428494 MMP14P50281 582 aa17.41■□□□□ 0.38
GHDC-203ENST00000428494 TRADDQ15628 312 aa17.41■□□□□ 0.38
GHDC-203ENST00000428494 ECM1Q16610 540 aa17.41■□□□□ 0.38
GHDC-203ENST00000428494 SPTY2D1Q68D10 685 aaPredicted RBP17.41■□□□□ 0.38
GHDC-203ENST00000428494 IFT81Q8WYA0 676 aa17.41■□□□□ 0.38
GHDC-203ENST00000428494 DDX12PQ92771 950 aa17.41■□□□□ 0.38
GHDC-203ENST00000428494 CDK5RAP3Q96JB5 506 aa17.41■□□□□ 0.38
GHDC-203ENST00000428494 TBC1D7Q9P0N9 293 aa17.41■□□□□ 0.38
GHDC-203ENST00000428494 ANKIB1Q9P2G1 1089 aa17.41■□□□□ 0.38
GHDC-203ENST00000428494 NFU1Q9UMS0 254 aa17.41■□□□□ 0.38
GHDC-203ENST00000428494 GOLGB1Q14789 3259 aaKnown RBP17.41■□□□□ 0.38
GHDC-203ENST00000428494 TLR2O60603 784 aa17.41■□□□□ 0.38
GHDC-203ENST00000428494 FTCDO95954 541 aa17.41■□□□□ 0.38
GHDC-203ENST00000428494 PAFAH1B1P43034 410 aa17.41■□□□□ 0.38
GHDC-203ENST00000428494 EPHB4P54760 987 aa17.41■□□□□ 0.38
GHDC-203ENST00000428494 ARID5AQ03989 594 aa17.41■□□□□ 0.38
GHDC-203ENST00000428494 ITIH3Q06033 890 aa17.41■□□□□ 0.38
GHDC-203ENST00000428494 PDXDC1Q6P996 788 aa17.41■□□□□ 0.38
GHDC-203ENST00000428494 PPM1EQ8WY54 764 aa17.41■□□□□ 0.38
GHDC-203ENST00000428494 CEP95Q96GE4 821 aa17.41■□□□□ 0.38
GHDC-203ENST00000428494 ZIM3Q96PE6 472 aa17.41■□□□□ 0.38
GHDC-203ENST00000428494 SEC63Q9UGP8 760 aaKnown RBP17.41■□□□□ 0.38
GHDC-203ENST00000428494 FRMPD2Q68DX3 1309 aaPredicted RBP17.4■□□□□ 0.38
GHDC-203ENST00000428494 PPP1R2P41236 205 aa17.4■□□□□ 0.38
GHDC-203ENST00000428494 ATP1A2P50993 1020 aa17.4■□□□□ 0.38
GHDC-203ENST00000428494 COBLL1Q53SF7 1204 aa17.4■□□□□ 0.38
GHDC-203ENST00000428494 MICALL1Q8N3F8 863 aa17.4■□□□□ 0.38
GHDC-203ENST00000428494 GUF1Q8N442 669 aaKnown RBP17.4■□□□□ 0.38
GHDC-203ENST00000428494 FGFBP2Q9BYJ0 223 aa17.4■□□□□ 0.38
GHDC-203ENST00000428494 PJA2O43164 708 aa17.4■□□□□ 0.38
GHDC-203ENST00000428494 TM4SF1P30408 202 aa17.4■□□□□ 0.38
GHDC-203ENST00000428494 LIG3P49916 1009 aa17.4■□□□□ 0.38
GHDC-203ENST00000428494 NOX5Q96PH1 765 aa17.4■□□□□ 0.38
GHDC-203ENST00000428494 SETDB2Q96T68 719 aa17.4■□□□□ 0.38
GHDC-203ENST00000428494 LZTS2Q9BRK4 669 aa17.4■□□□□ 0.38
GHDC-203ENST00000428494 EIF3HO15372 352 aaKnown RBP eCLIP17.39■□□□□ 0.37
GHDC-203ENST00000428494 NOL4O94818 638 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms