RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 STRBPQ96SI9 672 aaKnown RBP5.67□□□□□ -1.5
RIF1-203ENST00000428287 CCDC188H7C350 402 aa5.67□□□□□ -1.5
RIF1-203ENST00000428287 SART1O43290 800 aaKnown RBP5.67□□□□□ -1.5
RIF1-203ENST00000428287 MYO1EQ12965 1108 aa5.67□□□□□ -1.5
RIF1-203ENST00000428287 PTGDRQ13258 359 aa5.67□□□□□ -1.5
RIF1-203ENST00000428287 DIXDC1Q155Q3 683 aa5.67□□□□□ -1.5
RIF1-203ENST00000428287 PPP2R5EQ16537 467 aa5.67□□□□□ -1.5
RIF1-203ENST00000428287 HIBCHQ6NVY1 386 aaPredicted RBP5.67□□□□□ -1.5
RIF1-203ENST00000428287 C8orf74Q6P047 294 aa5.67□□□□□ -1.5
RIF1-203ENST00000428287 MICU3Q86XE3 530 aa5.67□□□□□ -1.5
RIF1-203ENST00000428287 SH3TC2Q8TF17 1288 aa5.67□□□□□ -1.5
RIF1-203ENST00000428287 IFIH1Q9BYX4 1025 aaKnown RBP5.67□□□□□ -1.5
RIF1-203ENST00000428287 PAPOLBQ9NRJ5 636 aaKnown RBP5.67□□□□□ -1.5
RIF1-203ENST00000428287 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.67□□□□□ -1.5
RIF1-203ENST00000428287 A0A087WZG4 1122 aa5.67□□□□□ -1.5
RIF1-203ENST00000428287 PRPF3O43395 683 aaKnown RBP5.67□□□□□ -1.5
RIF1-203ENST00000428287 PCCAP05165 728 aaPredicted RBP5.67□□□□□ -1.5
RIF1-203ENST00000428287 IFIT1P09914 478 aaKnown RBP5.67□□□□□ -1.5
RIF1-203ENST00000428287 TRIM21P19474 475 aaKnown RBP5.67□□□□□ -1.5
RIF1-203ENST00000428287 ADD2P35612 726 aa5.67□□□□□ -1.5
RIF1-203ENST00000428287 ABL2P42684 1182 aa5.67□□□□□ -1.5
RIF1-203ENST00000428287 KCTD16Q68DU8 428 aa5.67□□□□□ -1.5
RIF1-203ENST00000428287 MFSD5Q6N075 450 aa5.67□□□□□ -1.5
RIF1-203ENST00000428287 GSPT2Q8IYD1 628 aaKnown RBP5.67□□□□□ -1.5
RIF1-203ENST00000428287 ANKS1AQ92625 1134 aa5.67□□□□□ -1.5
RIF1-203ENST00000428287 RSRC1Q96IZ7 334 aaKnown RBP5.67□□□□□ -1.5
RIF1-203ENST00000428287 EPB41L4BQ9H329 900 aa5.67□□□□□ -1.5
RIF1-203ENST00000428287 THAP9Q9H5L6 903 aa5.67□□□□□ -1.5
RIF1-203ENST00000428287 CTNNAL1Q9UBT7 734 aa5.67□□□□□ -1.5
RIF1-203ENST00000428287 TRPC6Q9Y210 931 aa5.67□□□□□ -1.5
RIF1-203ENST00000428287 ZSCAN5CA6NGD5 496 aaPredicted RBP5.67□□□□□ -1.5
RIF1-203ENST00000428287 NEBLO76041 1014 aa5.67□□□□□ -1.5
RIF1-203ENST00000428287 CCND1P24385 295 aa5.67□□□□□ -1.5
RIF1-203ENST00000428287 CNGA1P29973 690 aa5.67□□□□□ -1.5
RIF1-203ENST00000428287 NT5C2P49902 561 aa5.67□□□□□ -1.5
RIF1-203ENST00000428287 PPARAQ07869 468 aa5.67□□□□□ -1.5
RIF1-203ENST00000428287 BIRC2Q13490 618 aa5.67□□□□□ -1.5
RIF1-203ENST00000428287 PLS1Q14651 629 aa5.67□□□□□ -1.5
RIF1-203ENST00000428287 SEC23AQ15436 765 aa5.67□□□□□ -1.5
RIF1-203ENST00000428287 QPCTQ16769 361 aa5.67□□□□□ -1.5
RIF1-203ENST00000428287 ZNF530Q6P9A1 599 aaPredicted RBP5.67□□□□□ -1.5
RIF1-203ENST00000428287 LMBR1LQ6UX01 489 aa5.67□□□□□ -1.5
RIF1-203ENST00000428287 CEP57Q86XR8 500 aa5.67□□□□□ -1.5
RIF1-203ENST00000428287 MFN1Q8IWA4 741 aa5.67□□□□□ -1.5
RIF1-203ENST00000428287 STAMBPL1Q96FJ0 436 aa5.67□□□□□ -1.5
RIF1-203ENST00000428287 CCDC42Q96M95 316 aa5.67□□□□□ -1.5
RIF1-203ENST00000428287 JADE2Q9NQC1 790 aa5.67□□□□□ -1.5
RIF1-203ENST00000428287 AIPL1Q9NZN9 384 aa5.67□□□□□ -1.5
RIF1-203ENST00000428287 COL24A1Q17RW2 1714 aa5.67□□□□□ -1.5
RIF1-203ENST00000428287 CACNA1IQ9P0X4 2223 aa5.67□□□□□ -1.5
RIF1-203ENST00000428287 BTNL10A8MVZ5 291 aa5.67□□□□□ -1.5
RIF1-203ENST00000428287 USO1O60763 962 aaKnown RBP5.67□□□□□ -1.5
RIF1-203ENST00000428287 OAS1P00973 400 aaKnown RBP5.67□□□□□ -1.5
RIF1-203ENST00000428287 HSD17B3P37058 310 aa5.67□□□□□ -1.5
RIF1-203ENST00000428287 PDE6CP51160 858 aa5.67□□□□□ -1.5
RIF1-203ENST00000428287 CYP27A1Q02318 531 aa5.67□□□□□ -1.5
RIF1-203ENST00000428287 PABPC1LQ4VXU2 614 aaKnown RBP5.67□□□□□ -1.5
RIF1-203ENST00000428287 TRIM22Q8IYM9 498 aa5.67□□□□□ -1.5
RIF1-203ENST00000428287 SMYD4Q8IYR2 804 aaPredicted RBP5.67□□□□□ -1.5
RIF1-203ENST00000428287 ATXN2LQ8WWM7 1075 aaKnown RBP5.67□□□□□ -1.5
RIF1-203ENST00000428287 LRRC45Q96CN5 670 aa5.67□□□□□ -1.5
RIF1-203ENST00000428287 NHEJ1Q9H9Q4 299 aaPredicted RBP5.67□□□□□ -1.5
RIF1-203ENST00000428287 NOP53Q9NZM5 478 aaKnown RBP5.67□□□□□ -1.5
RIF1-203ENST00000428287 TRAFD1O14545 582 aaPredicted RBP5.66□□□□□ -1.5
RIF1-203ENST00000428287 ORC4O43929 436 aa5.66□□□□□ -1.5
RIF1-203ENST00000428287 A1BGP04217 495 aa5.66□□□□□ -1.5
RIF1-203ENST00000428287 SCARF1Q14162 830 aa5.66□□□□□ -1.5
RIF1-203ENST00000428287 VGLL2Q8N8G2 317 aa5.66□□□□□ -1.5
RIF1-203ENST00000428287 ACTRT1Q8TDG2 376 aa5.66□□□□□ -1.5
RIF1-203ENST00000428287 XAGE3Q8WTP9 111 aa5.66□□□□□ -1.5
RIF1-203ENST00000428287 LPIN2Q92539 896 aa5.66□□□□□ -1.5
RIF1-203ENST00000428287 RUFY1Q96T51 708 aa5.66□□□□□ -1.5
RIF1-203ENST00000428287 RMND1Q9NWS8 449 aa5.66□□□□□ -1.5
RIF1-203ENST00000428287 SWAP70Q9UH65 585 aa5.66□□□□□ -1.5
RIF1-203ENST00000428287 DENND2AQ9ULE3 1009 aa5.66□□□□□ -1.5
RIF1-203ENST00000428287 PPP2R2AP63151 447 aa5.66□□□□□ -1.5
RIF1-203ENST00000428287 SLC30A9Q6PML9 568 aa5.66□□□□□ -1.5
RIF1-203ENST00000428287 CCDC121Q6ZUS5 278 aa5.66□□□□□ -1.5
RIF1-203ENST00000428287 CYB5R4Q7L1T6 521 aa5.66□□□□□ -1.5
RIF1-203ENST00000428287 SDCCAG8Q86SQ7 713 aaPredicted RBP5.66□□□□□ -1.5
RIF1-203ENST00000428287 CPLX3Q8WVH0 158 aa5.66□□□□□ -1.5
RIF1-203ENST00000428287 RAPGEF5Q92565 580 aa5.66□□□□□ -1.5
RIF1-203ENST00000428287 FAM136AQ96C01 138 aa5.66□□□□□ -1.5
RIF1-203ENST00000428287 HAPLN3Q96S86 360 aa5.66□□□□□ -1.5
RIF1-203ENST00000428287 CUEDC2Q9H467 287 aa5.66□□□□□ -1.5
RIF1-203ENST00000428287 MAGEF1Q9HAY2 307 aa5.66□□□□□ -1.5
RIF1-203ENST00000428287 PANK4Q9NVE7 773 aa5.66□□□□□ -1.5
RIF1-203ENST00000428287 NFU1Q9UMS0 254 aa5.66□□□□□ -1.5
RIF1-203ENST00000428287 WNT7AO00755 349 aa5.66□□□□□ -1.5
RIF1-203ENST00000428287 SNX3O60493 162 aa5.66□□□□□ -1.5
RIF1-203ENST00000428287 TRIM29Q14134 588 aa5.66□□□□□ -1.5
RIF1-203ENST00000428287 TTC19Q6DKK2 380 aaPredicted RBP5.66□□□□□ -1.5
RIF1-203ENST00000428287 NOC3LQ8WTT2 800 aaKnown RBP5.66□□□□□ -1.5
RIF1-203ENST00000428287 ZNF496Q96IT1 587 aaPredicted RBP5.66□□□□□ -1.5
RIF1-203ENST00000428287 PUS7LQ9H0K6 701 aaKnown RBP5.66□□□□□ -1.5
RIF1-203ENST00000428287 SLC39A2Q9NP94 309 aa5.66□□□□□ -1.5
RIF1-203ENST00000428287 SH3BP1Q9Y3L3 701 aa5.66□□□□□ -1.5
RIF1-203ENST00000428287 TTC36A6NLP5 189 aa5.66□□□□□ -1.5
RIF1-203ENST00000428287 M0R2C6 588 aa5.66□□□□□ -1.5
RIF1-203ENST00000428287 PSMA7O14818 248 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms