RNA–Protein interactions for RNA: ENST00000428017.5

VARS2-203, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 1,103 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-203ENST00000428017 FOXP1Q9H334 677 aaPredicted RBP17.27■□□□□ 0.36
VARS2-203ENST00000428017 FAM184BQ9ULE4 1060 aa17.27■□□□□ 0.36
VARS2-203ENST00000428017 SMCHD1A6NHR9 2005 aa17.26■□□□□ 0.35
VARS2-203ENST00000428017 M0R2N6 131 aa17.26■□□□□ 0.35
VARS2-203ENST00000428017 CYBAP13498 195 aa17.26■□□□□ 0.35
VARS2-203ENST00000428017 PDIA4P13667 645 aaKnown RBP17.26■□□□□ 0.35
VARS2-203ENST00000428017 MAP3K21Q5TCX8 1036 aa17.26■□□□□ 0.35
VARS2-203ENST00000428017 NLRX1Q86UT6 975 aa17.26■□□□□ 0.35
VARS2-203ENST00000428017 TBCKQ8TEA7 893 aa17.26■□□□□ 0.35
VARS2-203ENST00000428017 SCFD2Q8WU76 684 aa17.26■□□□□ 0.35
VARS2-203ENST00000428017 ZNF333Q96JL9 665 aa17.26■□□□□ 0.35
VARS2-203ENST00000428017 RTEL1Q9NZ71 1219 aa17.26■□□□□ 0.35
VARS2-203ENST00000428017 ZNF865P0CJ78 1059 aaPredicted RBP17.25■□□□□ 0.35
VARS2-203ENST00000428017 CCL5P13501 91 aa17.25■□□□□ 0.35
VARS2-203ENST00000428017 AKR1A1P14550 325 aa17.25■□□□□ 0.35
VARS2-203ENST00000428017 SYT1P21579 422 aa17.25■□□□□ 0.35
VARS2-203ENST00000428017 CCND3P30281 292 aaPredicted RBP17.25■□□□□ 0.35
VARS2-203ENST00000428017 USP11P51784 963 aa17.25■□□□□ 0.35
VARS2-203ENST00000428017 TTLL4Q14679 1199 aa17.25■□□□□ 0.35
VARS2-203ENST00000428017 INF2Q27J81 1249 aa17.25■□□□□ 0.35
VARS2-203ENST00000428017 ZFP91Q96JP5 570 aaPredicted RBP17.25■□□□□ 0.35
VARS2-203ENST00000428017 NAP1L4Q99733 375 aaKnown RBP17.25■□□□□ 0.35
VARS2-203ENST00000428017 RNF208Q9H0X6 261 aa17.25■□□□□ 0.35
VARS2-203ENST00000428017 TSHZ2Q9NRE2 1034 aa17.25■□□□□ 0.35
VARS2-203ENST00000428017 MRVI1Q9Y6F6 885 aa17.25■□□□□ 0.35
VARS2-203ENST00000428017 SEPT4O43236 478 aa17.24■□□□□ 0.35
VARS2-203ENST00000428017 MSCO60682 206 aa17.24■□□□□ 0.35
VARS2-203ENST00000428017 CYP3A4P08684 503 aa17.24■□□□□ 0.35
VARS2-203ENST00000428017 MRPS9P82933 396 aaKnown RBP17.24■□□□□ 0.35
VARS2-203ENST00000428017 CCDC144BQ3MJ40 725 aa17.24■□□□□ 0.35
VARS2-203ENST00000428017 IQSEC1Q6DN90 963 aa17.24■□□□□ 0.35
VARS2-203ENST00000428017 KCNV1Q6PIU1 500 aa17.24■□□□□ 0.35
VARS2-203ENST00000428017 NEK8Q86SG6 692 aa17.24■□□□□ 0.35
VARS2-203ENST00000428017 NOSTRINQ8IVI9 506 aa17.24■□□□□ 0.35
VARS2-203ENST00000428017 CDHR1Q96JP9 859 aa17.24■□□□□ 0.35
VARS2-203ENST00000428017 TMEM106CQ9BVX2 250 aa17.24■□□□□ 0.35
VARS2-203ENST00000428017 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.24■□□□□ 0.353e-13■■□□□ 12.4
VARS2-203ENST00000428017 UNC93B1Q9H1C4 597 aa17.24■□□□□ 0.35
VARS2-203ENST00000428017 NOL7Q9UMY1 257 aaKnown RBP17.24■□□□□ 0.35
VARS2-203ENST00000428017 DOCK3Q8IZD9 2030 aa17.24■□□□□ 0.35
VARS2-203ENST00000428017 FIBPO43427 364 aa17.23■□□□□ 0.35
VARS2-203ENST00000428017 STX6O43752 255 aa17.23■□□□□ 0.35
VARS2-203ENST00000428017 TXNP10599 105 aaKnown RBP17.23■□□□□ 0.35
VARS2-203ENST00000428017 RARBP10826 455 aa17.23■□□□□ 0.35
VARS2-203ENST00000428017 ADCYAP1R1P41586 468 aa17.23■□□□□ 0.35
VARS2-203ENST00000428017 TNFAIP2Q03169 654 aa17.23■□□□□ 0.35
VARS2-203ENST00000428017 MTMR1Q13613 665 aa17.23■□□□□ 0.35
VARS2-203ENST00000428017 MTFR1Q15390 333 aa17.23■□□□□ 0.35
VARS2-203ENST00000428017 LETM2Q2VYF4 491 aa17.23■□□□□ 0.35
VARS2-203ENST00000428017 CEP55Q53EZ4 464 aa17.23■□□□□ 0.35
VARS2-203ENST00000428017 TAPT1Q6NXT6 567 aa17.23■□□□□ 0.35
VARS2-203ENST00000428017 TNS4Q8IZW8 715 aa17.23■□□□□ 0.35
VARS2-203ENST00000428017 TRPV1Q8NER1 839 aa17.23■□□□□ 0.35
VARS2-203ENST00000428017 TNFRSF25Q93038 417 aa17.23■□□□□ 0.35
VARS2-203ENST00000428017 GPRASP2Q96D09 838 aa17.23■□□□□ 0.35
VARS2-203ENST00000428017 INPP4AQ96PE3 977 aaPredicted RBP17.23■□□□□ 0.35
VARS2-203ENST00000428017 MXRA8Q9BRK3 442 aa17.23■□□□□ 0.35
VARS2-203ENST00000428017 WDR11Q9BZH6 1224 aa17.23■□□□□ 0.35
VARS2-203ENST00000428017 KATNBL1Q9H079 304 aa17.23■□□□□ 0.35
VARS2-203ENST00000428017 PDGFCQ9NRA1 345 aa17.23■□□□□ 0.35
VARS2-203ENST00000428017 DDX20Q9UHI6 824 aaKnown RBP17.23■□□□□ 0.35
VARS2-203ENST00000428017 U2AF2P26368 475 aaKnown RBP eCLIP17.22■□□□□ 0.356e-8■□□□□ 8.3
VARS2-203ENST00000428017 SETQ01105 290 aaPredicted RBP17.22■□□□□ 0.35
VARS2-203ENST00000428017 CRYGNQ8WXF5 182 aa17.22■□□□□ 0.35
VARS2-203ENST00000428017 JADE2Q9NQC1 790 aa17.22■□□□□ 0.35
VARS2-203ENST00000428017 RBM19Q9Y4C8 960 aaKnown RBP17.22■□□□□ 0.35
VARS2-203ENST00000428017 UBIAD1Q9Y5Z9 338 aa17.22■□□□□ 0.35
VARS2-203ENST00000428017 PLXNA1Q9UIW2 1896 aa17.22■□□□□ 0.35
VARS2-203ENST00000428017 ZNFX1Q9P2E3 1918 aaKnown RBP17.21■□□□□ 0.35
VARS2-203ENST00000428017 RBM47A0AV96 593 aaKnown RBP17.21■□□□□ 0.35
VARS2-203ENST00000428017 KIF28PB7ZC32 967 aa17.21■□□□□ 0.35
VARS2-203ENST00000428017 NKRFO15226 690 aaKnown RBP eCLIP17.21■□□□□ 0.35
VARS2-203ENST00000428017 MAFGO15525 162 aa17.21■□□□□ 0.35
VARS2-203ENST00000428017 CCNT1O60563 726 aaKnown RBP17.21■□□□□ 0.35
VARS2-203ENST00000428017 TGFB3P10600 412 aa17.21■□□□□ 0.35
VARS2-203ENST00000428017 GCFC2P16383 781 aaKnown RBP17.21■□□□□ 0.35
VARS2-203ENST00000428017 ITGB5P18084 799 aa17.21■□□□□ 0.35
VARS2-203ENST00000428017 ATP2B1P20020 1258 aa17.21■□□□□ 0.35
VARS2-203ENST00000428017 PRR16Q569H4 304 aa17.21■□□□□ 0.35
VARS2-203ENST00000428017 EARS2Q5JPH6 523 aaKnown RBP17.21■□□□□ 0.35
VARS2-203ENST00000428017 NIPA1Q7RTP0 329 aa17.21■□□□□ 0.35
VARS2-203ENST00000428017 PLA2G4DQ86XP0 818 aa17.21■□□□□ 0.35
VARS2-203ENST00000428017 DEFB118Q96PH6 123 aa17.21■□□□□ 0.35
VARS2-203ENST00000428017 AP5M1Q9H0R1 490 aa17.21■□□□□ 0.35
VARS2-203ENST00000428017 SPC25Q9HBM1 224 aa17.21■□□□□ 0.35
VARS2-203ENST00000428017 FAM205CA6NFA0 338 aa17.2■□□□□ 0.34
VARS2-203ENST00000428017 SPATA31C2B4DYI2 1134 aa17.2■□□□□ 0.34
VARS2-203ENST00000428017 FAM86B1E9PN63 330 aa17.2■□□□□ 0.34
VARS2-203ENST00000428017 RGS20O76081 388 aa17.2■□□□□ 0.34
VARS2-203ENST00000428017 FAM86B2P0C5J1 330 aa17.2■□□□□ 0.34
VARS2-203ENST00000428017 SMPD1P17405 629 aa17.2■□□□□ 0.34
VARS2-203ENST00000428017 ICAM3P32942 547 aa17.2■□□□□ 0.34
VARS2-203ENST00000428017 CIITAP33076 1130 aa17.2■□□□□ 0.34
VARS2-203ENST00000428017 DUSP28Q4G0W2 176 aa17.2■□□□□ 0.34
VARS2-203ENST00000428017 ANO1Q5XXA6 986 aa17.2■□□□□ 0.34
VARS2-203ENST00000428017 MOXD1Q6UVY6 613 aa17.2■□□□□ 0.34
VARS2-203ENST00000428017 BRAPQ7Z569 592 aa17.2■□□□□ 0.34
VARS2-203ENST00000428017 FERMT3Q86UX7 667 aa17.2■□□□□ 0.34
VARS2-203ENST00000428017 GIMAP8Q8ND71 665 aaPredicted RBP17.2■□□□□ 0.34
VARS2-203ENST00000428017 PAK6Q9NQU5 681 aaPredicted RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 134.9 ms