RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 CDC45O75419 566 aa21.3■■□□□ 1
PSPC1-202ENST00000427943 EIF3JO75822 258 aaKnown RBP21.3■■□□□ 1
PSPC1-202ENST00000427943 MMP3P08254 477 aa21.3■■□□□ 1
PSPC1-202ENST00000427943 POLR2MP0CAP2 368 aa21.3■■□□□ 1
PSPC1-202ENST00000427943 CYP2C9P11712 490 aa21.3■■□□□ 1
PSPC1-202ENST00000427943 SMAD3P84022 425 aaKnown RBP21.3■■□□□ 1
PSPC1-202ENST00000427943 PGM5Q15124 567 aa21.3■■□□□ 1
PSPC1-202ENST00000427943 TMEM240Q5SV17 173 aa21.3■■□□□ 1
PSPC1-202ENST00000427943 FAM109BQ6ICB4 259 aaPredicted RBP21.3■■□□□ 1
PSPC1-202ENST00000427943 CCDC136Q96JN2 1154 aa21.3■■□□□ 1
PSPC1-202ENST00000427943 ZFP91Q96JP5 570 aaPredicted RBP21.3■■□□□ 1
PSPC1-202ENST00000427943 MAP3K14Q99558 947 aa21.3■■□□□ 1
PSPC1-202ENST00000427943 SPZ1Q9BXG8 430 aa21.3■■□□□ 1
PSPC1-202ENST00000427943 WNT8AQ9H1J5 351 aa21.3■■□□□ 1
PSPC1-202ENST00000427943 MRVI1Q9Y6F6 885 aa21.3■■□□□ 1
PSPC1-202ENST00000427943 KPNA6O60684 536 aa21.29■■□□□ 1
PSPC1-202ENST00000427943 CMTR1Q8N1G2 835 aaKnown RBP21.29■■□□□ 1
PSPC1-202ENST00000427943 SAMD3Q8N6K7 520 aa21.29■■□□□ 1
PSPC1-202ENST00000427943 RRP36Q96EU6 259 aaKnown RBP21.29■■□□□ 1
PSPC1-202ENST00000427943 GUCD1Q96NT3 240 aa21.29■■□□□ 1
PSPC1-202ENST00000427943 DDX41Q9UJV9 622 aaKnown RBP21.29■■□□□ 1
PSPC1-202ENST00000427943 SORBS3O60504 671 aa21.28■■□□□ 1
PSPC1-202ENST00000427943 RGS20O76081 388 aa21.28■■□□□ 1
PSPC1-202ENST00000427943 LIFRP42702 1097 aa21.28■■□□□ 1
PSPC1-202ENST00000427943 RNF20Q5VTR2 975 aa21.28■■□□□ 1
PSPC1-202ENST00000427943 PSRC1Q6PGN9 363 aaPredicted RBP21.28■■□□□ 1
PSPC1-202ENST00000427943 ZNF365Q70YC5 407 aa21.28■■□□□ 1
PSPC1-202ENST00000427943 TMTC2Q8N394 836 aa21.28■■□□□ 1
PSPC1-202ENST00000427943 SRBD1Q8N5C6 995 aaKnown RBP21.28■■□□□ 1
PSPC1-202ENST00000427943 IL23AQ9NPF7 189 aa21.28■■□□□ 1
PSPC1-202ENST00000427943 STXBP5LQ9Y2K9 1186 aa21.28■■□□□ 1
PSPC1-202ENST00000427943 SCLYQ96I15 445 aa21.27■■□□□ 1
PSPC1-202ENST00000427943 TCEANC2Q96MN5 208 aa21.27■■□□□ 1
PSPC1-202ENST00000427943 SEC63Q9UGP8 760 aaKnown RBP21.27■■□□□ 1
PSPC1-202ENST00000427943 SUPT20HL2P0C7V6 817 aa21.26■□□□□ 0.99
PSPC1-202ENST00000427943 CCND2P30279 289 aa21.26■□□□□ 0.99
PSPC1-202ENST00000427943 NFRKBQ6P4R8 1299 aa21.26■□□□□ 0.99
PSPC1-202ENST00000427943 VSIG10LQ86VR7 867 aa21.26■□□□□ 0.99
PSPC1-202ENST00000427943 MICU3Q86XE3 530 aa21.26■□□□□ 0.99
PSPC1-202ENST00000427943 GPKOWQ92917 476 aaPredicted RBP eCLIP21.26■□□□□ 0.99
PSPC1-202ENST00000427943 TTYH1Q9H313 450 aaPredicted RBP21.26■□□□□ 0.99
PSPC1-202ENST00000427943 SLC12A7Q9Y666 1083 aa21.26■□□□□ 0.99
PSPC1-202ENST00000427943 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.25■□□□□ 0.99
PSPC1-202ENST00000427943 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.25■□□□□ 0.99
PSPC1-202ENST00000427943 hCG_1642624A0A1W2PR95 340 aa21.25■□□□□ 0.99
PSPC1-202ENST00000427943 CALM1P0DP23 149 aa21.25■□□□□ 0.99
PSPC1-202ENST00000427943 CALM2P0DP24 149 aa21.25■□□□□ 0.99
PSPC1-202ENST00000427943 CALM3P0DP25 149 aa21.25■□□□□ 0.99
PSPC1-202ENST00000427943 GNAQP50148 359 aa21.25■□□□□ 0.99
PSPC1-202ENST00000427943 ADCK5Q3MIX3 580 aa21.25■□□□□ 0.99
PSPC1-202ENST00000427943 DHX37Q8IY37 1157 aaKnown RBP21.25■□□□□ 0.99
PSPC1-202ENST00000427943 RASEFQ8IZ41 740 aa21.25■□□□□ 0.99
PSPC1-202ENST00000427943 CCDC82Q8N4S0 544 aa21.25■□□□□ 0.99
PSPC1-202ENST00000427943 NEK1Q96PY6 1258 aa21.25■□□□□ 0.99
PSPC1-202ENST00000427943 LZTS2Q9BRK4 669 aa21.25■□□□□ 0.99
PSPC1-202ENST00000427943 FRMPD4Q14CM0 1322 aa21.25■□□□□ 0.99
PSPC1-202ENST00000427943 GGPS1O95749 300 aa21.24■□□□□ 0.99
PSPC1-202ENST00000427943 ZNF286BP0CG31 522 aa21.24■□□□□ 0.99
PSPC1-202ENST00000427943 CASTP20810 708 aaKnown RBP21.24■□□□□ 0.99
PSPC1-202ENST00000427943 UBA1P22314 1058 aaKnown RBP21.24■□□□□ 0.99
PSPC1-202ENST00000427943 DNAJB2P25686 324 aa21.24■□□□□ 0.99
PSPC1-202ENST00000427943 SMARCA1P28370 1054 aa21.24■□□□□ 0.99
PSPC1-202ENST00000427943 DGKDQ16760 1214 aa21.24■□□□□ 0.99
PSPC1-202ENST00000427943 RASIP1Q5U651 963 aa21.24■□□□□ 0.99
PSPC1-202ENST00000427943 USP17L6PQ6QN14 398 aa21.24■□□□□ 0.99
PSPC1-202ENST00000427943 SMARCC2Q8TAQ2 1214 aa21.24■□□□□ 0.99
PSPC1-202ENST00000427943 KAT2BQ92831 832 aa21.24■□□□□ 0.99
PSPC1-202ENST00000427943 EMID1Q96A84 441 aaPredicted RBP21.24■□□□□ 0.99
PSPC1-202ENST00000427943 SEMA6BQ9H3T3 888 aa21.24■□□□□ 0.99
PSPC1-202ENST00000427943 TET1Q8NFU7 2136 aa21.23■□□□□ 0.99
PSPC1-202ENST00000427943 GRXCR1A8MXD5 290 aa21.23■□□□□ 0.99
PSPC1-202ENST00000427943 FGBP02675 491 aa21.23■□□□□ 0.99
PSPC1-202ENST00000427943 SP2Q02086 613 aa21.23■□□□□ 0.99
PSPC1-202ENST00000427943 PTPN11Q06124 597 aaPredicted RBP21.23■□□□□ 0.99
PSPC1-202ENST00000427943 LAMC2Q13753 1193 aa21.23■□□□□ 0.99
PSPC1-202ENST00000427943 TMTC3Q6ZXV5 915 aa21.23■□□□□ 0.99
PSPC1-202ENST00000427943 OTOP2Q7RTS6 562 aa21.23■□□□□ 0.99
PSPC1-202ENST00000427943 SGMS1Q86VZ5 419 aa21.23■□□□□ 0.99
PSPC1-202ENST00000427943 PPTC7Q8NI37 304 aa21.23■□□□□ 0.99
PSPC1-202ENST00000427943 ALG1Q9BT22 464 aa21.23■□□□□ 0.99
PSPC1-202ENST00000427943 CXXC1Q9P0U4 656 aaPredicted RBP21.23■□□□□ 0.99
PSPC1-202ENST00000427943 NOD1Q9Y239 953 aa21.23■□□□□ 0.99
PSPC1-202ENST00000427943 MRPS9P82933 396 aaKnown RBP21.22■□□□□ 0.99
PSPC1-202ENST00000427943 HSDL1Q3SXM5 330 aa21.22■□□□□ 0.99
PSPC1-202ENST00000427943 CELF3Q5SZQ8 465 aaKnown RBP21.22■□□□□ 0.99
PSPC1-202ENST00000427943 GDF6Q6KF10 455 aaPredicted RBP21.22■□□□□ 0.99
PSPC1-202ENST00000427943 KCNV1Q6PIU1 500 aa21.22■□□□□ 0.99
PSPC1-202ENST00000427943 APOA5Q6Q788 366 aa21.22■□□□□ 0.99
PSPC1-202ENST00000427943 FANCBQ8NB91 859 aa21.22■□□□□ 0.99
PSPC1-202ENST00000427943 HERVK_113Q902F9 699 aa21.22■□□□□ 0.99
PSPC1-202ENST00000427943 CUL5Q93034 780 aa21.22■□□□□ 0.99
PSPC1-202ENST00000427943 SPATA33Q96N06 139 aa21.22■□□□□ 0.99
PSPC1-202ENST00000427943 CDX2Q99626 313 aaPredicted RBP21.22■□□□□ 0.99
PSPC1-202ENST00000427943 PTPRSQ13332 1948 aa21.21■□□□□ 0.99
PSPC1-202ENST00000427943 MEIS2O14770 477 aa21.21■□□□□ 0.99
PSPC1-202ENST00000427943 PSEN2P49810 448 aa21.21■□□□□ 0.99
PSPC1-202ENST00000427943 EXOSC10Q01780 885 aaKnown RBP21.21■□□□□ 0.99
PSPC1-202ENST00000427943 PTGISQ16647 500 aa21.21■□□□□ 0.99
PSPC1-202ENST00000427943 MYSM1Q5VVJ2 828 aa21.21■□□□□ 0.99
PSPC1-202ENST00000427943 SYNE3Q6ZMZ3 975 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms