RNA–Protein interactions for RNA: ENST00000427004.5

PHF1-203, Transcript of PHD finger protein 1, humanhuman

TSL 4

Gene PHF1, Length 609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-203ENST00000427004 MMP1P03956 469 aa17.6■□□□□ 0.41
PHF1-203ENST00000427004 SEMA3FQ13275 785 aa17.6■□□□□ 0.41
PHF1-203ENST00000427004 INF2Q27J81 1249 aa17.6■□□□□ 0.41
PHF1-203ENST00000427004 CCDC144BQ3MJ40 725 aa17.6■□□□□ 0.41
PHF1-203ENST00000427004 PIK3AP1Q6ZUJ8 805 aa17.6■□□□□ 0.41
PHF1-203ENST00000427004 ZNF467Q7Z7K2 595 aaPredicted RBP17.6■□□□□ 0.41
PHF1-203ENST00000427004 DIS3L2Q8IYB7 885 aaKnown RBP17.6■□□□□ 0.41
PHF1-203ENST00000427004 DNERQ8NFT8 737 aa17.6■□□□□ 0.41
PHF1-203ENST00000427004 MORC4Q8TE76 937 aa17.6■□□□□ 0.41
PHF1-203ENST00000427004 PPP1R13LQ8WUF5 828 aa17.6■□□□□ 0.41
PHF1-203ENST00000427004 WDR11Q9BZH6 1224 aa17.6■□□□□ 0.41
PHF1-203ENST00000427004 PCDH10Q9P2E7 1040 aa17.6■□□□□ 0.41
PHF1-203ENST00000427004 FRMPD4Q14CM0 1322 aa17.6■□□□□ 0.41
PHF1-203ENST00000427004 SYNGAP1Q96PV0 1343 aa17.6■□□□□ 0.41
PHF1-203ENST00000427004 TNRC18O15417 2968 aaPredicted RBP17.6■□□□□ 0.41
PHF1-203ENST00000427004 SMPD1P17405 629 aa17.59■□□□□ 0.41
PHF1-203ENST00000427004 ATP2B1P20020 1258 aa17.59■□□□□ 0.41
PHF1-203ENST00000427004 HMGN5P82970 282 aaKnown RBP17.59■□□□□ 0.41
PHF1-203ENST00000427004 TRAF1Q13077 416 aa17.59■□□□□ 0.41
PHF1-203ENST00000427004 NBR1Q14596 966 aa17.59■□□□□ 0.41
PHF1-203ENST00000427004 LY6KQ17RY6 165 aa17.59■□□□□ 0.41
PHF1-203ENST00000427004 TBCKQ8TEA7 893 aa17.59■□□□□ 0.41
PHF1-203ENST00000427004 CCDC12Q8WUD4 166 aaPredicted RBP17.59■□□□□ 0.41
PHF1-203ENST00000427004 TNFRSF25Q93038 417 aa17.59■□□□□ 0.41
PHF1-203ENST00000427004 CNPY2Q9Y2B0 182 aa17.59■□□□□ 0.41
PHF1-203ENST00000427004 TDP2O95551 362 aa17.58■□□□□ 0.4
PHF1-203ENST00000427004 GNA11P29992 359 aa17.58■□□□□ 0.4
PHF1-203ENST00000427004 CCND2P30279 289 aa17.58■□□□□ 0.4
PHF1-203ENST00000427004 KRT2P35908 639 aa17.58■□□□□ 0.4
PHF1-203ENST00000427004 SP2Q02086 613 aa17.58■□□□□ 0.4
PHF1-203ENST00000427004 FERMT3Q86UX7 667 aa17.58■□□□□ 0.4
PHF1-203ENST00000427004 VSIG10LQ86VR7 867 aa17.58■□□□□ 0.4
PHF1-203ENST00000427004 DAGLBQ8NCG7 672 aa17.58■□□□□ 0.4
PHF1-203ENST00000427004 WASF1Q92558 559 aa17.58■□□□□ 0.4
PHF1-203ENST00000427004 HMX1Q9NP08 348 aaPredicted RBP17.58■□□□□ 0.4
PHF1-203ENST00000427004 FAM86B1E9PN63 330 aa17.57■□□□□ 0.4
PHF1-203ENST00000427004 PGK1P00558 417 aa17.57■□□□□ 0.4
PHF1-203ENST00000427004 FAM86B2P0C5J1 330 aa17.57■□□□□ 0.4
PHF1-203ENST00000427004 ARP10275 920 aa17.57■□□□□ 0.4
PHF1-203ENST00000427004 ITGB5P18084 799 aa17.57■□□□□ 0.4
PHF1-203ENST00000427004 EN2P19622 333 aaPredicted RBP17.57■□□□□ 0.4
PHF1-203ENST00000427004 ARHGAP4P98171 946 aa17.57■□□□□ 0.4
PHF1-203ENST00000427004 BEX3Q00994 111 aa17.57■□□□□ 0.4
PHF1-203ENST00000427004 PKP1Q13835 747 aa17.57■□□□□ 0.4
PHF1-203ENST00000427004 STXBP2Q15833 593 aa17.57■□□□□ 0.4
PHF1-203ENST00000427004 LHX8Q68G74 356 aa17.57■□□□□ 0.4
PHF1-203ENST00000427004 FBXO18Q8NFZ0 1043 aa17.57■□□□□ 0.4
PHF1-203ENST00000427004 ABHD16BQ9H3Z7 469 aa17.57■□□□□ 0.4
PHF1-203ENST00000427004 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.57■□□□□ 0.4
PHF1-203ENST00000427004 KIAA0100Q14667 2235 aaKnown RBP17.57■□□□□ 0.4
PHF1-203ENST00000427004 VPS37CA5D8V6 355 aaPredicted RBP17.56■□□□□ 0.4
PHF1-203ENST00000427004 ATP9AO75110 1047 aa17.56■□□□□ 0.4
PHF1-203ENST00000427004 SREBF1P36956 1147 aa17.56■□□□□ 0.4
PHF1-203ENST00000427004 SP4Q02446 784 aa17.56■□□□□ 0.4
PHF1-203ENST00000427004 TRIM29Q14134 588 aa17.56■□□□□ 0.4
PHF1-203ENST00000427004 PCNX4Q63HM2 1172 aa17.56■□□□□ 0.4
PHF1-203ENST00000427004 LARP1BQ659C4 914 aaKnown RBP17.56■□□□□ 0.4
PHF1-203ENST00000427004 MCTP1Q6DN14 999 aa17.56■□□□□ 0.4
PHF1-203ENST00000427004 TRMT44Q8IYL2 757 aaKnown RBP17.56■□□□□ 0.4
PHF1-203ENST00000427004 DIS3LQ8TF46 1054 aaKnown RBP17.56■□□□□ 0.4
PHF1-203ENST00000427004 CRYGNQ8WXF5 182 aa17.56■□□□□ 0.4
PHF1-203ENST00000427004 PAK6Q9NQU5 681 aaPredicted RBP17.56■□□□□ 0.4
PHF1-203ENST00000427004 MAP3K20Q9NYL2 800 aaKnown RBP17.56■□□□□ 0.4
PHF1-203ENST00000427004 DDX20Q9UHI6 824 aaKnown RBP17.56■□□□□ 0.4
PHF1-203ENST00000427004 DDX39AO00148 427 aaKnown RBP17.55■□□□□ 0.4
PHF1-203ENST00000427004 XBP1P17861 261 aa17.55■□□□□ 0.4
PHF1-203ENST00000427004 TNFAIP2Q03169 654 aa17.55■□□□□ 0.4
PHF1-203ENST00000427004 AP3B2Q13367 1082 aa17.55■□□□□ 0.4
PHF1-203ENST00000427004 FAM173BQ6P4H8 233 aa17.55■□□□□ 0.4
PHF1-203ENST00000427004 U2AF1L4Q8WU68 220 aaKnown RBP17.55■□□□□ 0.4
PHF1-203ENST00000427004 CHAMP1Q96JM3 812 aa17.55■□□□□ 0.4
PHF1-203ENST00000427004 IWS1Q96ST2 819 aa17.55■□□□□ 0.4
PHF1-203ENST00000427004 VTA1Q9NP79 307 aa17.55■□□□□ 0.4
PHF1-203ENST00000427004 UBIAD1Q9Y5Z9 338 aa17.55■□□□□ 0.4
PHF1-203ENST00000427004 CCDC194A0A1B0GVG4 234 aa17.54■□□□□ 0.4
PHF1-203ENST00000427004 SEPT4O43236 478 aa17.54■□□□□ 0.4
PHF1-203ENST00000427004 SLC37A4O43826 429 aa17.54■□□□□ 0.4
PHF1-203ENST00000427004 SLC34A2O95436 690 aa17.54■□□□□ 0.4
PHF1-203ENST00000427004 HSP90AA1P07900 732 aaKnown RBP17.54■□□□□ 0.4
PHF1-203ENST00000427004 TXNP10599 105 aaKnown RBP17.54■□□□□ 0.4
PHF1-203ENST00000427004 SYT1P21579 422 aa17.54■□□□□ 0.4
PHF1-203ENST00000427004 NONOQ15233 471 aaKnown RBP eCLIP17.54■□□□□ 0.43e-7■■■■■ 27.4
PHF1-203ENST00000427004 LETM2Q2VYF4 491 aa17.54■□□□□ 0.4
PHF1-203ENST00000427004 BICD2Q8TD16 824 aa17.54■□□□□ 0.4
PHF1-203ENST00000427004 MRVI1Q9Y6F6 885 aa17.54■□□□□ 0.4
PHF1-203ENST00000427004 MYH15Q9Y2K3 1946 aa17.54■□□□□ 0.4
PHF1-203ENST00000427004 SYNRGQ9UMZ2 1314 aa17.53■□□□□ 0.4
PHF1-203ENST00000427004 IGLV3-22A0A075B6J6 115 aa17.53■□□□□ 0.4
PHF1-203ENST00000427004 H3BQV1 296 aa17.53■□□□□ 0.4
PHF1-203ENST00000427004 CTAGE5O15320 804 aa17.53■□□□□ 0.4
PHF1-203ENST00000427004 DYNC1LI2O43237 492 aaPredicted RBP17.53■□□□□ 0.4
PHF1-203ENST00000427004 EIF3JO75822 258 aaKnown RBP17.53■□□□□ 0.4
PHF1-203ENST00000427004 FOSP01100 380 aaPredicted RBP17.53■□□□□ 0.4
PHF1-203ENST00000427004 AKR1A1P14550 325 aa17.53■□□□□ 0.4
PHF1-203ENST00000427004 UBA1P22314 1058 aaKnown RBP17.53■□□□□ 0.4
PHF1-203ENST00000427004 ZNF76P36508 570 aa17.53■□□□□ 0.4
PHF1-203ENST00000427004 FOXD4L6Q3SYB3 417 aaPredicted RBP17.53■□□□□ 0.4
PHF1-203ENST00000427004 CCDC62Q6P9F0 684 aa17.53■□□□□ 0.4
PHF1-203ENST00000427004 FOXD4L3Q6VB84 417 aaPredicted RBP17.53■□□□□ 0.4
PHF1-203ENST00000427004 KRT25Q7Z3Z0 450 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms