RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 PNMA6FA0A0J9YX94 578 aa8.59□□□□□ -1.03
LINC01049-201ENST00000426840 SLC15A5A6NIM6 579 aa8.59□□□□□ -1.03
LINC01049-201ENST00000426840 GOLGA8AA7E2F4 631 aa8.59□□□□□ -1.03
LINC01049-201ENST00000426840 GOLGA8BA8MQT2 603 aa8.59□□□□□ -1.03
LINC01049-201ENST00000426840 ZBTB5O15062 677 aa8.59□□□□□ -1.03
LINC01049-201ENST00000426840 STRNO43815 780 aa8.59□□□□□ -1.03
LINC01049-201ENST00000426840 DHX16O60231 1041 aaKnown RBP8.59□□□□□ -1.03
LINC01049-201ENST00000426840 GDF9O60383 454 aa8.59□□□□□ -1.03
LINC01049-201ENST00000426840 ALAS1P13196 640 aa8.59□□□□□ -1.03
LINC01049-201ENST00000426840 COPB2P35606 906 aa8.59□□□□□ -1.03
LINC01049-201ENST00000426840 FLT3LGP49771 235 aa8.59□□□□□ -1.03
LINC01049-201ENST00000426840 METAP2P50579 478 aaKnown RBP eCLIP8.59□□□□□ -1.03
LINC01049-201ENST00000426840 PRMT2P55345 433 aa8.59□□□□□ -1.03
LINC01049-201ENST00000426840 CCT2P78371 535 aaKnown RBP8.59□□□□□ -1.03
LINC01049-201ENST00000426840 SKOR1P84550 965 aa8.59□□□□□ -1.03
LINC01049-201ENST00000426840 ANKRD1Q15327 319 aa8.59□□□□□ -1.03
LINC01049-201ENST00000426840 NTRK3Q16288 839 aa8.59□□□□□ -1.03
LINC01049-201ENST00000426840 MUM1L1Q5H9M0 696 aa8.59□□□□□ -1.03
LINC01049-201ENST00000426840 COL13A1Q5TAT6 717 aaPredicted RBP8.59□□□□□ -1.03
LINC01049-201ENST00000426840 FBXO11Q86XK2 927 aa8.59□□□□□ -1.03
LINC01049-201ENST00000426840 CCAR1Q8IX12 1150 aaKnown RBP8.59□□□□□ -1.03
LINC01049-201ENST00000426840 ABRAQ8N0Z2 381 aa8.59□□□□□ -1.03
LINC01049-201ENST00000426840 CCDC82Q8N4S0 544 aa8.59□□□□□ -1.03
LINC01049-201ENST00000426840 CHST13Q8NET6 341 aa8.59□□□□□ -1.03
LINC01049-201ENST00000426840 CLEC4DQ8WXI8 215 aa8.59□□□□□ -1.03
LINC01049-201ENST00000426840 BAP1Q92560 729 aa8.59□□□□□ -1.03
LINC01049-201ENST00000426840 COA7Q96BR5 231 aa8.59□□□□□ -1.03
LINC01049-201ENST00000426840 TRERF1Q96PN7 1200 aa8.59□□□□□ -1.03
LINC01049-201ENST00000426840 CCPG1Q9ULG6 757 aa8.59□□□□□ -1.03
LINC01049-201ENST00000426840 NAP1L2Q9ULW6 460 aaPredicted RBP8.59□□□□□ -1.03
LINC01049-201ENST00000426840 PLXNB2O15031 1838 aa8.59□□□□□ -1.03
LINC01049-201ENST00000426840 DNAJC25-GNG10A0A024R161 153 aa8.58□□□□□ -1.04
LINC01049-201ENST00000426840 CCDC196A0A1B0GTZ2 297 aa8.58□□□□□ -1.04
LINC01049-201ENST00000426840 hCG_1642624A0A1W2PR95 340 aa8.58□□□□□ -1.04
LINC01049-201ENST00000426840 NRG2O14511 850 aaPredicted RBP8.58□□□□□ -1.04
LINC01049-201ENST00000426840 PFKFB2O60825 505 aa8.58□□□□□ -1.04
LINC01049-201ENST00000426840 COBLO75128 1261 aa8.58□□□□□ -1.04
LINC01049-201ENST00000426840 LARGE1O95461 756 aa8.58□□□□□ -1.04
LINC01049-201ENST00000426840 FCER1AP12319 257 aa8.58□□□□□ -1.04
LINC01049-201ENST00000426840 PRKCZQ05513 592 aa8.58□□□□□ -1.04
LINC01049-201ENST00000426840 IRF5Q13568 498 aa8.58□□□□□ -1.04
LINC01049-201ENST00000426840 GRB14Q14449 540 aa8.58□□□□□ -1.04
LINC01049-201ENST00000426840 RABEP1Q15276 862 aa8.58□□□□□ -1.04
LINC01049-201ENST00000426840 PKN2Q16513 984 aaKnown RBP8.58□□□□□ -1.04
LINC01049-201ENST00000426840 ME3Q16798 604 aa8.58□□□□□ -1.04
LINC01049-201ENST00000426840 WDR78Q5VTH9 848 aa8.58□□□□□ -1.04
LINC01049-201ENST00000426840 HOMER1Q86YM7 354 aa8.58□□□□□ -1.04
LINC01049-201ENST00000426840 NPLOC4Q8TAT6 608 aa8.58□□□□□ -1.04
LINC01049-201ENST00000426840 PIBF1Q8WXW3 757 aa8.58□□□□□ -1.04
LINC01049-201ENST00000426840 TBC1D5Q92609 795 aa8.58□□□□□ -1.04
LINC01049-201ENST00000426840 AMNQ9BXJ7 453 aa8.58□□□□□ -1.04
LINC01049-201ENST00000426840 NCOA5Q9HCD5 579 aaKnown RBP8.58□□□□□ -1.04
LINC01049-201ENST00000426840 RNF146Q9NTX7 359 aa8.58□□□□□ -1.04
LINC01049-201ENST00000426840 FBXO40Q9UH90 709 aa8.58□□□□□ -1.04
LINC01049-201ENST00000426840 PNMA2Q9UL42 364 aa8.58□□□□□ -1.04
LINC01049-201ENST00000426840 CNTNAP5Q8WYK1 1306 aa8.57□□□□□ -1.04
LINC01049-201ENST00000426840 NFIBO00712 420 aa8.57□□□□□ -1.04
LINC01049-201ENST00000426840 OPLAHO14841 1288 aa8.57□□□□□ -1.04
LINC01049-201ENST00000426840 PRPF3O43395 683 aaKnown RBP8.57□□□□□ -1.04
LINC01049-201ENST00000426840 F12P00748 615 aaPredicted RBP8.57□□□□□ -1.04
LINC01049-201ENST00000426840 IGHA2P01877 340 aa8.57□□□□□ -1.04
LINC01049-201ENST00000426840 HOXC6P09630 235 aa8.57□□□□□ -1.04
LINC01049-201ENST00000426840 XRCC5P13010 732 aaKnown RBP8.57□□□□□ -1.04
LINC01049-201ENST00000426840 IFNAR1P17181 557 aa8.57□□□□□ -1.04
LINC01049-201ENST00000426840 CYP2B6P20813 491 aa8.57□□□□□ -1.04
LINC01049-201ENST00000426840 ADORA2AP29274 412 aa8.57□□□□□ -1.04
LINC01049-201ENST00000426840 SCRN1Q12765 414 aa8.57□□□□□ -1.04
LINC01049-201ENST00000426840 STK3Q13188 491 aa8.57□□□□□ -1.04
LINC01049-201ENST00000426840 KCTD2Q14681 263 aa8.57□□□□□ -1.04
LINC01049-201ENST00000426840 PKN1Q16512 942 aa8.57□□□□□ -1.04
LINC01049-201ENST00000426840 ZNF792Q3KQV3 632 aa8.57□□□□□ -1.04
LINC01049-201ENST00000426840 USH1GQ495M9 461 aa8.57□□□□□ -1.04
LINC01049-201ENST00000426840 FBXO46Q6PJ61 603 aaPredicted RBP8.57□□□□□ -1.04
LINC01049-201ENST00000426840 NECAB1Q8N987 351 aa8.57□□□□□ -1.04
LINC01049-201ENST00000426840 RGS22Q8NE09 1264 aa8.57□□□□□ -1.04
LINC01049-201ENST00000426840 LRRN4Q8WUT4 740 aa8.57□□□□□ -1.04
LINC01049-201ENST00000426840 RRP36Q96EU6 259 aaKnown RBP8.57□□□□□ -1.04
LINC01049-201ENST00000426840 MMP19Q99542 508 aa8.57□□□□□ -1.04
LINC01049-201ENST00000426840 MCOLN1Q9GZU1 580 aa8.57□□□□□ -1.04
LINC01049-201ENST00000426840 SLKQ9H2G2 1235 aaPredicted RBP8.57□□□□□ -1.04
LINC01049-201ENST00000426840 ACAD9Q9H845 621 aa8.57□□□□□ -1.04
LINC01049-201ENST00000426840 A1CFQ9NQ94 594 aaKnown RBP8.57□□□□□ -1.04
LINC01049-201ENST00000426840 HOMER2Q9NSB8 354 aa8.57□□□□□ -1.04
LINC01049-201ENST00000426840 LIMCH1Q9UPQ0 1083 aa8.57□□□□□ -1.04
LINC01049-201ENST00000426840 PCDHA1Q9Y5I3 950 aa8.57□□□□□ -1.04
LINC01049-201ENST00000426840 PTCH2Q9Y6C5 1203 aa8.57□□□□□ -1.04
LINC01049-201ENST00000426840 IVNS1ABPQ9Y6Y0 642 aa8.57□□□□□ -1.04
LINC01049-201ENST00000426840 ABCB11O95342 1321 aa8.56□□□□□ -1.04
LINC01049-201ENST00000426840 MYH6P13533 1939 aa8.56□□□□□ -1.04
LINC01049-201ENST00000426840 ADCY3O60266 1144 aa8.56□□□□□ -1.04
LINC01049-201ENST00000426840 DTNBO60941 627 aa8.56□□□□□ -1.04
LINC01049-201ENST00000426840 CTDNEP1O95476 244 aa8.56□□□□□ -1.04
LINC01049-201ENST00000426840 PGK2P07205 417 aa8.56□□□□□ -1.04
LINC01049-201ENST00000426840 RFC5P40937 340 aa8.56□□□□□ -1.04
LINC01049-201ENST00000426840 RGS2P41220 211 aa8.56□□□□□ -1.04
LINC01049-201ENST00000426840 GHRHRQ02643 423 aa8.56□□□□□ -1.04
LINC01049-201ENST00000426840 ST3GAL1Q11201 340 aa8.56□□□□□ -1.04
LINC01049-201ENST00000426840 BAATQ14032 418 aaPredicted RBP8.56□□□□□ -1.04
LINC01049-201ENST00000426840 LAPTM4AQ15012 233 aa8.56□□□□□ -1.04
LINC01049-201ENST00000426840 CCL14Q16627 93 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms