RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 XRRA1Q6P2D8 792 aa27.99■■■□□ 2.07
VEGFA-209ENST00000425836 C8orf76Q96K31 380 aa27.99■■■□□ 2.07
VEGFA-209ENST00000425836 SMC3Q9UQE7 1217 aa27.99■■■□□ 2.07
VEGFA-209ENST00000425836 C11orf97A0A1B0GVM6 126 aaPredicted RBP27.99■■■□□ 2.07
VEGFA-209ENST00000425836 RBM47A0AV96 593 aaKnown RBP27.99■■■□□ 2.07
VEGFA-209ENST00000425836 MSCO60682 206 aa27.99■■■□□ 2.07
VEGFA-209ENST00000425836 RGS20O76081 388 aa27.99■■■□□ 2.07
VEGFA-209ENST00000425836 GJB2P29033 226 aa27.99■■■□□ 2.07
VEGFA-209ENST00000425836 SREBF1P36956 1147 aa27.99■■■□□ 2.07
VEGFA-209ENST00000425836 IQSEC1Q6DN90 963 aa27.99■■■□□ 2.07
VEGFA-209ENST00000425836 U2AF1L4Q8WU68 220 aaKnown RBP27.99■■■□□ 2.07
VEGFA-209ENST00000425836 ADCY6O43306 1168 aa27.98■■■□□ 2.07
VEGFA-209ENST00000425836 SGPL1O95470 568 aa27.98■■■□□ 2.07
VEGFA-209ENST00000425836 SEPT14Q6ZU15 432 aa27.98■■■□□ 2.07
VEGFA-209ENST00000425836 OXER1Q8TDS5 423 aa27.98■■■□□ 2.07
VEGFA-209ENST00000425836 RTEL1Q9NZ71 1219 aa27.98■■■□□ 2.07
VEGFA-209ENST00000425836 POTEFA5A3E0 1075 aa27.97■■■□□ 2.07
VEGFA-209ENST00000425836 MMP1P03956 469 aa27.97■■■□□ 2.07
VEGFA-209ENST00000425836 GJA8P48165 433 aa27.97■■■□□ 2.07
VEGFA-209ENST00000425836 GUCY1B3Q02153 619 aa27.97■■■□□ 2.07
VEGFA-209ENST00000425836 TMEM63BQ5T3F8 832 aa27.97■■■□□ 2.07
VEGFA-209ENST00000425836 LENG1Q96BZ8 264 aaPredicted RBP27.97■■■□□ 2.07
VEGFA-209ENST00000425836 WDR11Q9BZH6 1224 aa27.97■■■□□ 2.07
VEGFA-209ENST00000425836 STAM2O75886 525 aa27.96■■■□□ 2.07
VEGFA-209ENST00000425836 SMPD1P17405 629 aa27.96■■■□□ 2.07
VEGFA-209ENST00000425836 TNFAIP2Q03169 654 aa27.96■■■□□ 2.07
VEGFA-209ENST00000425836 SCFD2Q8WU76 684 aa27.96■■■□□ 2.07
VEGFA-209ENST00000425836 CRYGNQ8WXF5 182 aa27.96■■■□□ 2.07
VEGFA-209ENST00000425836 CRISPLD2Q9H0B8 497 aa27.96■■■□□ 2.07
VEGFA-209ENST00000425836 KIF3AQ9Y496 699 aa27.96■■■□□ 2.07
VEGFA-209ENST00000425836 RARBP10826 455 aa27.95■■■□□ 2.07
VEGFA-209ENST00000425836 ARHGAP4P98171 946 aa27.95■■■□□ 2.07
VEGFA-209ENST00000425836 FBXO18Q8NFZ0 1043 aa27.95■■■□□ 2.07
VEGFA-209ENST00000425836 INTS4Q96HW7 963 aaKnown RBP27.95■■■□□ 2.07
VEGFA-209ENST00000425836 INPP4AQ96PE3 977 aaPredicted RBP27.95■■■□□ 2.07
VEGFA-209ENST00000425836 KRT2P35908 639 aa27.94■■■□□ 2.06
VEGFA-209ENST00000425836 CCDC62Q6P9F0 684 aa27.94■■■□□ 2.06
VEGFA-209ENST00000425836 BRMS1Q9HCU9 246 aa27.94■■■□□ 2.06
VEGFA-209ENST00000425836 OGDHLQ9ULD0 1010 aa27.94■■■□□ 2.06
VEGFA-209ENST00000425836 GNEQ9Y223 722 aaKnown RBP27.94■■■□□ 2.06
VEGFA-209ENST00000425836 MCM3APO60318 1980 aa27.94■■■□□ 2.06
VEGFA-209ENST00000425836 DUSP11O75319 330 aaKnown RBP27.94■■■□□ 2.06
VEGFA-209ENST00000425836 ARIH2O95376 493 aa27.94■■■□□ 2.06
VEGFA-209ENST00000425836 TFRCP02786 760 aaKnown RBP27.94■■■□□ 2.06
VEGFA-209ENST00000425836 ITGB5P18084 799 aa27.94■■■□□ 2.06
VEGFA-209ENST00000425836 TTLL4Q14679 1199 aa27.94■■■□□ 2.06
VEGFA-209ENST00000425836 DUSP28Q4G0W2 176 aa27.94■■■□□ 2.06
VEGFA-209ENST00000425836 DIS3L2Q8IYB7 885 aaKnown RBP27.94■■■□□ 2.06
VEGFA-209ENST00000425836 UBIAD1Q9Y5Z9 338 aa27.94■■■□□ 2.06
VEGFA-209ENST00000425836 BRCA2P51587 3418 aa27.93■■■□□ 2.06
VEGFA-209ENST00000425836 BTBD18B2RXH4 712 aa27.93■■■□□ 2.06
VEGFA-209ENST00000425836 CYP3A4P08684 503 aa27.93■■■□□ 2.06
VEGFA-209ENST00000425836 TXNP10599 105 aaKnown RBP27.93■■■□□ 2.06
VEGFA-209ENST00000425836 PTGS1P23219 599 aa27.93■■■□□ 2.06
VEGFA-209ENST00000425836 SOX10P56693 466 aa27.93■■■□□ 2.06
VEGFA-209ENST00000425836 NR5A1Q13285 461 aa27.93■■■□□ 2.06
VEGFA-209ENST00000425836 KRT25Q7Z3Z0 450 aa27.93■■■□□ 2.06
VEGFA-209ENST00000425836 LRRC37A2A6NM11 1700 aa27.92■■■□□ 2.06
VEGFA-209ENST00000425836 EN2P19622 333 aaPredicted RBP27.92■■■□□ 2.06
VEGFA-209ENST00000425836 GJC2Q5T442 439 aaPredicted RBP27.92■■■□□ 2.06
VEGFA-209ENST00000425836 TBCKQ8TEA7 893 aa27.92■■■□□ 2.06
VEGFA-209ENST00000425836 TNFRSF25Q93038 417 aa27.92■■■□□ 2.06
VEGFA-209ENST00000425836 XPNPEP3Q9NQH7 507 aa27.92■■■□□ 2.06
VEGFA-209ENST00000425836 FOXD4L1Q9NU39 408 aa27.92■■■□□ 2.06
VEGFA-209ENST00000425836 DDX41Q9UJV9 622 aaKnown RBP27.92■■■□□ 2.06
VEGFA-209ENST00000425836 MRVI1Q9Y6F6 885 aa27.92■■■□□ 2.06
VEGFA-209ENST00000425836 EDIL3O43854 480 aa27.91■■■□□ 2.06
VEGFA-209ENST00000425836 NONOQ15233 471 aaKnown RBP eCLIP27.91■■■□□ 2.063e-6■■■□□ 16.3
VEGFA-209ENST00000425836 LY6KQ17RY6 165 aa27.91■■■□□ 2.06
VEGFA-209ENST00000425836 GNPTABQ3T906 1256 aa27.91■■■□□ 2.06
VEGFA-209ENST00000425836 EARS2Q5JPH6 523 aaKnown RBP27.91■■■□□ 2.06
VEGFA-209ENST00000425836 NLRX1Q86UT6 975 aa27.91■■■□□ 2.06
VEGFA-209ENST00000425836 CYP2W1Q8TAV3 490 aa27.91■■■□□ 2.06
VEGFA-209ENST00000425836 MXRA8Q9BRK3 442 aa27.91■■■□□ 2.06
VEGFA-209ENST00000425836 JADE2Q9NQC1 790 aa27.91■■■□□ 2.06
VEGFA-209ENST00000425836 CCDC194A0A1B0GVG4 234 aa27.9■■■□□ 2.06
VEGFA-209ENST00000425836 ICAM3P32942 547 aa27.9■■■□□ 2.06
VEGFA-209ENST00000425836 SEMA3FQ13275 785 aa27.9■■■□□ 2.06
VEGFA-209ENST00000425836 SAFBQ15424 915 aaKnown RBP eCLIP27.9■■■□□ 2.06
VEGFA-209ENST00000425836 KCNV1Q6PIU1 500 aa27.9■■■□□ 2.06
VEGFA-209ENST00000425836 COPS5Q92905 334 aa27.9■■■□□ 2.06
VEGFA-209ENST00000425836 Q9Y3F1 56 aa27.9■■■□□ 2.06
VEGFA-209ENST00000425836 SPATA31C2B4DYI2 1134 aa27.9■■■□□ 2.06
VEGFA-209ENST00000425836 PGK1P00558 417 aa27.9■■■□□ 2.06
VEGFA-209ENST00000425836 TGFB3P10600 412 aa27.9■■■□□ 2.06
VEGFA-209ENST00000425836 CEP55Q53EZ4 464 aa27.9■■■□□ 2.06
VEGFA-209ENST00000425836 PIK3AP1Q6ZUJ8 805 aa27.9■■■□□ 2.06
VEGFA-209ENST00000425836 GPRASP2Q96D09 838 aa27.9■■■□□ 2.06
VEGFA-209ENST00000425836 NKRFO15226 690 aaKnown RBP eCLIP27.89■■■□□ 2.054e-7■□□□□ 10.1
VEGFA-209ENST00000425836 DYNC1LI2O43237 492 aaPredicted RBP27.89■■■□□ 2.05
VEGFA-209ENST00000425836 FIBPO43427 364 aa27.89■■■□□ 2.05
VEGFA-209ENST00000425836 ADAMTS4O75173 837 aa27.89■■■□□ 2.05
VEGFA-209ENST00000425836 CAPN2P17655 700 aa27.89■■■□□ 2.05
VEGFA-209ENST00000425836 ZNF76P36508 570 aa27.89■■■□□ 2.05
VEGFA-209ENST00000425836 USP11P51784 963 aa27.89■■■□□ 2.05
VEGFA-209ENST00000425836 SP2Q02086 613 aa27.89■■■□□ 2.05
VEGFA-209ENST00000425836 TLK2Q86UE8 772 aa27.89■■■□□ 2.05
VEGFA-209ENST00000425836 SYNRGQ9UMZ2 1314 aa27.89■■■□□ 2.05
VEGFA-209ENST00000425836 FAM86B1E9PN63 330 aa27.88■■■□□ 2.05
VEGFA-209ENST00000425836 MEIS1O00470 390 aa27.88■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms