RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 FUT2Q10981 343 aa21.19■□□□□ 0.98
SMARCAL1-205ENST00000425815 SHHQ15465 462 aa21.19■□□□□ 0.98
SMARCAL1-205ENST00000425815 HMGB1P09429 215 aaKnown RBP21.18■□□□□ 0.98
SMARCAL1-205ENST00000425815 USP17L6PQ6QN14 398 aa21.18■□□□□ 0.98
SMARCAL1-205ENST00000425815 AFG1LQ8WV93 481 aa21.18■□□□□ 0.98
SMARCAL1-205ENST00000425815 TRPV6Q9H1D0 765 aa21.18■□□□□ 0.98
SMARCAL1-205ENST00000425815 POLR3EQ9NVU0 708 aa21.18■□□□□ 0.98
SMARCAL1-205ENST00000425815 BAZ2BQ9UIF8 2168 aaKnown RBP21.18■□□□□ 0.98
SMARCAL1-205ENST00000425815 PIK3CDO00329 1044 aa21.17■□□□□ 0.98
SMARCAL1-205ENST00000425815 MRPS9P82933 396 aaKnown RBP21.17■□□□□ 0.98
SMARCAL1-205ENST00000425815 SP2Q02086 613 aa21.17■□□□□ 0.98
SMARCAL1-205ENST00000425815 SYNE3Q6ZMZ3 975 aa21.17■□□□□ 0.98
SMARCAL1-205ENST00000425815 PPP1R13LQ8WUF5 828 aa21.17■□□□□ 0.98
SMARCAL1-205ENST00000425815 GPKOWQ92917 476 aaPredicted RBP eCLIP21.17■□□□□ 0.98
SMARCAL1-205ENST00000425815 JAKMIP1Q96N16 626 aaKnown RBP21.17■□□□□ 0.98
SMARCAL1-205ENST00000425815 MTG1Q9BT17 334 aaPredicted RBP21.17■□□□□ 0.98
SMARCAL1-205ENST00000425815 SEC63Q9UGP8 760 aaKnown RBP21.17■□□□□ 0.98
SMARCAL1-205ENST00000425815 FRMPD4Q14CM0 1322 aa21.17■□□□□ 0.98
SMARCAL1-205ENST00000425815 LTBP2Q14767 1821 aa21.16■□□□□ 0.98
SMARCAL1-205ENST00000425815 ZBTB43O43298 467 aa21.16■□□□□ 0.98
SMARCAL1-205ENST00000425815 B4GALT4O60513 344 aa21.16■□□□□ 0.98
SMARCAL1-205ENST00000425815 REC8O95072 547 aa21.16■□□□□ 0.98
SMARCAL1-205ENST00000425815 GH1P01241 217 aa21.16■□□□□ 0.98
SMARCAL1-205ENST00000425815 CDC27P30260 824 aa21.16■□□□□ 0.98
SMARCAL1-205ENST00000425815 USP26Q9BXU7 913 aa21.16■□□□□ 0.98
SMARCAL1-205ENST00000425815 SEZ6LQ9BYH1 1024 aa21.16■□□□□ 0.98
SMARCAL1-205ENST00000425815 ALDH8A1Q9H2A2 487 aaPredicted RBP21.16■□□□□ 0.98
SMARCAL1-205ENST00000425815 KLF18A0A0U1RQI7 1052 aa21.15■□□□□ 0.98
SMARCAL1-205ENST00000425815 KPNA6O60684 536 aa21.15■□□□□ 0.98
SMARCAL1-205ENST00000425815 MMP3P08254 477 aa21.15■□□□□ 0.98
SMARCAL1-205ENST00000425815 CCND2P30279 289 aa21.15■□□□□ 0.98
SMARCAL1-205ENST00000425815 NBPF20Q3BBV1 942 aa21.15■□□□□ 0.98
SMARCAL1-205ENST00000425815 MFSD5Q6N075 450 aa21.15■□□□□ 0.98
SMARCAL1-205ENST00000425815 Q6ZUG5 572 aa21.15■□□□□ 0.98
SMARCAL1-205ENST00000425815 C16orf59Q7L2K0 433 aa21.15■□□□□ 0.98
SMARCAL1-205ENST00000425815 FBXL16Q8N461 479 aa21.15■□□□□ 0.98
SMARCAL1-205ENST00000425815 KAT2BQ92831 832 aa21.15■□□□□ 0.98
SMARCAL1-205ENST00000425815 EMID1Q96A84 441 aaPredicted RBP21.15■□□□□ 0.98
SMARCAL1-205ENST00000425815 BCAS3Q9H6U6 928 aa21.15■□□□□ 0.98
SMARCAL1-205ENST00000425815 RBM28Q9NW13 759 aaKnown RBP21.15■□□□□ 0.98
SMARCAL1-205ENST00000425815 MRVI1Q9Y6F6 885 aa21.15■□□□□ 0.98
SMARCAL1-205ENST00000425815 CNTNAP5Q8WYK1 1306 aa21.14■□□□□ 0.97
SMARCAL1-205ENST00000425815 TLR3O15455 904 aaKnown RBP21.14■□□□□ 0.97
SMARCAL1-205ENST00000425815 EPB41L2O43491 1005 aaKnown RBP21.14■□□□□ 0.97
SMARCAL1-205ENST00000425815 RPS6KB1P23443 525 aa21.14■□□□□ 0.97
SMARCAL1-205ENST00000425815 APOBRQ0VD83 1088 aa21.14■□□□□ 0.97
SMARCAL1-205ENST00000425815 RTN1Q16799 776 aa21.14■□□□□ 0.97
SMARCAL1-205ENST00000425815 BRDTQ58F21 947 aaPredicted RBP21.14■□□□□ 0.97
SMARCAL1-205ENST00000425815 TYW1BQ6NUM6 668 aa21.14■□□□□ 0.97
SMARCAL1-205ENST00000425815 AGXT2Q9BYV1 514 aa21.14■□□□□ 0.97
SMARCAL1-205ENST00000425815 PSTPIP2Q9H939 334 aa21.14■□□□□ 0.97
SMARCAL1-205ENST00000425815 UMODL1Q5DID0 1318 aa21.13■□□□□ 0.97
SMARCAL1-205ENST00000425815 CYP2C18P33260 490 aa21.13■□□□□ 0.97
SMARCAL1-205ENST00000425815 ADD1P35611 737 aaKnown RBP21.13■□□□□ 0.97
SMARCAL1-205ENST00000425815 FPGSQ05932 587 aa21.13■□□□□ 0.97
SMARCAL1-205ENST00000425815 SEMA3FQ13275 785 aa21.13■□□□□ 0.97
SMARCAL1-205ENST00000425815 MYSM1Q5VVJ2 828 aa21.13■□□□□ 0.97
SMARCAL1-205ENST00000425815 BLOC1S2Q6QNY1 142 aa21.13■□□□□ 0.97
SMARCAL1-205ENST00000425815 SMARCC2Q8TAQ2 1214 aa21.13■□□□□ 0.97
SMARCAL1-205ENST00000425815 PPP1R12CQ9BZL4 782 aa21.13■□□□□ 0.97
SMARCAL1-205ENST00000425815 TRMT13Q9NUP7 481 aaKnown RBP21.13■□□□□ 0.97
SMARCAL1-205ENST00000425815 RTEL1Q9NZ71 1219 aa21.13■□□□□ 0.97
SMARCAL1-205ENST00000425815 V9GY48 417 aaPredicted RBP21.13■□□□□ 0.97
SMARCAL1-205ENST00000425815 GOLGA8AA7E2F4 631 aa21.12■□□□□ 0.97
SMARCAL1-205ENST00000425815 GOLGA8BA8MQT2 603 aa21.12■□□□□ 0.97
SMARCAL1-205ENST00000425815 CENPBP07199 599 aaPredicted RBP21.12■□□□□ 0.97
SMARCAL1-205ENST00000425815 TGFB3P10600 412 aa21.12■□□□□ 0.97
SMARCAL1-205ENST00000425815 CSF2RAP15509 400 aa21.12■□□□□ 0.97
SMARCAL1-205ENST00000425815 RCAN1P53805 252 aa21.12■□□□□ 0.97
SMARCAL1-205ENST00000425815 LAMC2Q13753 1193 aa21.12■□□□□ 0.97
SMARCAL1-205ENST00000425815 CELF3Q5SZQ8 465 aaKnown RBP21.12■□□□□ 0.97
SMARCAL1-205ENST00000425815 WWC2Q6AWC2 1192 aa21.12■□□□□ 0.97
SMARCAL1-205ENST00000425815 DHX37Q8IY37 1157 aaKnown RBP21.12■□□□□ 0.97
SMARCAL1-205ENST00000425815 BRF1Q92994 677 aa21.12■□□□□ 0.97
SMARCAL1-205ENST00000425815 INPP4AQ96PE3 977 aaPredicted RBP21.12■□□□□ 0.97
SMARCAL1-205ENST00000425815 NOC4LQ9BVI4 516 aaKnown RBP21.12■□□□□ 0.97
SMARCAL1-205ENST00000425815 LAMA2P24043 3122 aaKnown RBP21.12■□□□□ 0.97
SMARCAL1-205ENST00000425815 SPATA31C2B4DYI2 1134 aa21.11■□□□□ 0.97
SMARCAL1-205ENST00000425815 SORBS3O60504 671 aa21.11■□□□□ 0.97
SMARCAL1-205ENST00000425815 HOXD8P13378 290 aaPredicted RBP21.11■□□□□ 0.97
SMARCAL1-205ENST00000425815 UBA1P22314 1058 aaKnown RBP21.11■□□□□ 0.97
SMARCAL1-205ENST00000425815 ICAM3P32942 547 aa21.11■□□□□ 0.97
SMARCAL1-205ENST00000425815 UBE2SQ16763 222 aa21.11■□□□□ 0.97
SMARCAL1-205ENST00000425815 HSDL1Q3SXM5 330 aa21.11■□□□□ 0.97
SMARCAL1-205ENST00000425815 GPR153Q6NV75 609 aa21.11■□□□□ 0.97
SMARCAL1-205ENST00000425815 NFRKBQ6P4R8 1299 aa21.11■□□□□ 0.97
SMARCAL1-205ENST00000425815 KCNV1Q6PIU1 500 aa21.11■□□□□ 0.97
SMARCAL1-205ENST00000425815 PPTC7Q8NI37 304 aa21.11■□□□□ 0.97
SMARCAL1-205ENST00000425815 CUL5Q93034 780 aa21.11■□□□□ 0.97
SMARCAL1-205ENST00000425815 VWCEQ96DN2 955 aa21.11■□□□□ 0.97
SMARCAL1-205ENST00000425815 HIPK3Q9H422 1215 aa21.11■□□□□ 0.97
SMARCAL1-205ENST00000425815 MYH6P13533 1939 aa21.11■□□□□ 0.97
SMARCAL1-205ENST00000425815 GGPS1O95749 300 aa21.1■□□□□ 0.97
SMARCAL1-205ENST00000425815 CYP2C9P11712 490 aa21.1■□□□□ 0.97
SMARCAL1-205ENST00000425815 CASTP20810 708 aaKnown RBP21.1■□□□□ 0.97
SMARCAL1-205ENST00000425815 DGKDQ16760 1214 aa21.1■□□□□ 0.97
SMARCAL1-205ENST00000425815 PCNX4Q63HM2 1172 aa21.1■□□□□ 0.97
SMARCAL1-205ENST00000425815 HEATR3Q7Z4Q2 680 aa21.1■□□□□ 0.97
SMARCAL1-205ENST00000425815 CTAGE1Q96RT6 745 aa21.1■□□□□ 0.97
SMARCAL1-205ENST00000425815 ZSWIM6Q9HCJ5 1215 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms