RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 MXD3Q9BW11 206 aa14.44□□□□□ -0.1
COL12A1-205ENST00000425443 TTYH3Q9C0H2 523 aa14.44□□□□□ -0.1
COL12A1-205ENST00000425443 COA1Q9GZY4 146 aa14.44□□□□□ -0.1
COL12A1-205ENST00000425443 CUEDC2Q9H467 287 aa14.44□□□□□ -0.1
COL12A1-205ENST00000425443 LRWD1Q9UFC0 647 aa14.44□□□□□ -0.1
COL12A1-205ENST00000425443 SERPINB13Q9UIV8 391 aa14.44□□□□□ -0.1
COL12A1-205ENST00000425443 TAF1LQ8IZX4 1826 aa14.43□□□□□ -0.1
COL12A1-205ENST00000425443 IDEP14735 1019 aa14.43□□□□□ -0.1
COL12A1-205ENST00000425443 STK4Q13043 487 aa14.43□□□□□ -0.1
COL12A1-205ENST00000425443 POTEDQ86YR6 584 aa14.43□□□□□ -0.1
COL12A1-205ENST00000425443 RAB34Q9BZG1 259 aa14.43□□□□□ -0.1
COL12A1-205ENST00000425443 SNED1Q8TER0 1413 aa14.43□□□□□ -0.1
COL12A1-205ENST00000425443 PSMD14O00487 310 aa14.43□□□□□ -0.1
COL12A1-205ENST00000425443 RHOBTB3O94955 611 aa14.43□□□□□ -0.1
COL12A1-205ENST00000425443 HLA-DOAP06340 250 aa14.43□□□□□ -0.1
COL12A1-205ENST00000425443 PLEKP08567 350 aaPredicted RBP14.43□□□□□ -0.1
COL12A1-205ENST00000425443 TBC1D8BQ0IIM8 1120 aa14.43□□□□□ -0.1
COL12A1-205ENST00000425443 SLC27A3Q5K4L6 730 aa14.43□□□□□ -0.1
COL12A1-205ENST00000425443 SP8Q8IXZ3 490 aa14.43□□□□□ -0.1
COL12A1-205ENST00000425443 SMCR8Q8TEV9 937 aaPredicted RBP14.43□□□□□ -0.1
COL12A1-205ENST00000425443 PLEKHA4Q9H4M7 779 aa14.43□□□□□ -0.1
COL12A1-205ENST00000425443 CAPN11Q9UMQ6 739 aa14.43□□□□□ -0.1
COL12A1-205ENST00000425443 GAKO14976 1311 aa14.42□□□□□ -0.1
COL12A1-205ENST00000425443 ZC3H4Q9UPT8 1303 aaKnown RBP14.42□□□□□ -0.1
COL12A1-205ENST00000425443 POLRMTO00411 1230 aaKnown RBP14.42□□□□□ -0.1
COL12A1-205ENST00000425443 ZNF263O14978 683 aa14.42□□□□□ -0.1
COL12A1-205ENST00000425443 HOXA10P31260 410 aaPredicted RBP14.42□□□□□ -0.1
COL12A1-205ENST00000425443 RBM5P52756 815 aaKnown RBP eCLIP14.42□□□□□ -0.1
COL12A1-205ENST00000425443 ASPRV1Q53RT3 343 aa14.42□□□□□ -0.1
COL12A1-205ENST00000425443 TUBGCP2Q9BSJ2 902 aa14.42□□□□□ -0.1
COL12A1-205ENST00000425443 MAGEF1Q9HAY2 307 aa14.42□□□□□ -0.1
COL12A1-205ENST00000425443 PSD3Q9NYI0 1048 aa14.42□□□□□ -0.1
COL12A1-205ENST00000425443 SBF2Q86WG5 1849 aa14.42□□□□□ -0.1
COL12A1-205ENST00000425443 BICDL2A1A5D9 508 aa14.42□□□□□ -0.1
COL12A1-205ENST00000425443 TTLL1O95922 423 aa14.42□□□□□ -0.1
COL12A1-205ENST00000425443 SYF2O95926 243 aaKnown RBP14.42□□□□□ -0.1
COL12A1-205ENST00000425443 EEF1GP26641 437 aaKnown RBP14.42□□□□□ -0.1
COL12A1-205ENST00000425443 DNA2P51530 1060 aa14.42□□□□□ -0.1
COL12A1-205ENST00000425443 SV2BQ7L1I2 683 aa14.42□□□□□ -0.1
COL12A1-205ENST00000425443 GIMAP8Q8ND71 665 aaPredicted RBP14.42□□□□□ -0.1
COL12A1-205ENST00000425443 CAGE1Q8TC20 777 aa14.42□□□□□ -0.1
COL12A1-205ENST00000425443 TRIM9Q9C026 710 aa14.42□□□□□ -0.1
COL12A1-205ENST00000425443 QTRT2Q9H974 415 aaKnown RBP14.42□□□□□ -0.1
COL12A1-205ENST00000425443 MYO1AQ9UBC5 1043 aa14.42□□□□□ -0.1
COL12A1-205ENST00000425443 POTEB2H3BUK9 544 aa14.41□□□□□ -0.1
COL12A1-205ENST00000425443 SMARCA1P28370 1054 aa14.41□□□□□ -0.1
COL12A1-205ENST00000425443 USP14P54578 494 aa14.41□□□□□ -0.1
COL12A1-205ENST00000425443 GPS2Q13227 327 aa14.41□□□□□ -0.1
COL12A1-205ENST00000425443 FKBP15Q5T1M5 1219 aa14.41□□□□□ -0.1
COL12A1-205ENST00000425443 ANKRD40Q6AI12 368 aa14.41□□□□□ -0.1
COL12A1-205ENST00000425443 KRT26Q7Z3Y9 468 aa14.41□□□□□ -0.1
COL12A1-205ENST00000425443 TMC4Q7Z404 712 aa14.41□□□□□ -0.1
COL12A1-205ENST00000425443 ZSCAN29Q8IWY8 852 aaPredicted RBP14.41□□□□□ -0.1
COL12A1-205ENST00000425443 DHTKD1Q96HY7 919 aaPredicted RBP14.41□□□□□ -0.1
COL12A1-205ENST00000425443 THAP9Q9H5L6 903 aa14.41□□□□□ -0.1
COL12A1-205ENST00000425443 FAM207AQ9NSI2 230 aaPredicted RBP14.41□□□□□ -0.1
COL12A1-205ENST00000425443 MYH1P12882 1939 aa14.41□□□□□ -0.1
COL12A1-205ENST00000425443 ERLIN1O75477 346 aa14.41□□□□□ -0.1
COL12A1-205ENST00000425443 SSBP05455 408 aaKnown RBP eCLIP14.41□□□□□ -0.1
COL12A1-205ENST00000425443 ACTN2P35609 894 aa14.41□□□□□ -0.1
COL12A1-205ENST00000425443 SLC16A2P36021 539 aa14.41□□□□□ -0.1
COL12A1-205ENST00000425443 TUBB2AQ13885 445 aa14.41□□□□□ -0.1
COL12A1-205ENST00000425443 WDR93Q6P2C0 686 aa14.41□□□□□ -0.1
COL12A1-205ENST00000425443 TUBB2BQ9BVA1 445 aa14.41□□□□□ -0.1
COL12A1-205ENST00000425443 ZNHIT6Q9NWK9 470 aaKnown RBP14.41□□□□□ -0.1
COL12A1-205ENST00000425443 EPHB6O15197 1021 aa14.41□□□□□ -0.1
COL12A1-205ENST00000425443 SLURP2P0DP57 97 aa14.41□□□□□ -0.1
COL12A1-205ENST00000425443 MIIPQ5JXC2 388 aa14.41□□□□□ -0.1
COL12A1-205ENST00000425443 CNNM4Q6P4Q7 775 aa14.41□□□□□ -0.1
COL12A1-205ENST00000425443 FAM114A1Q8IWE2 563 aa14.41□□□□□ -0.1
COL12A1-205ENST00000425443 GOLGA5Q8TBA6 731 aa14.41□□□□□ -0.1
COL12A1-205ENST00000425443 P2RX5Q93086 422 aa14.41□□□□□ -0.1
COL12A1-205ENST00000425443 CNOT6LQ96LI5 555 aaKnown RBP14.41□□□□□ -0.1
COL12A1-205ENST00000425443 NOC4LQ9BVI4 516 aaKnown RBP14.41□□□□□ -0.1
COL12A1-205ENST00000425443 RIOX1Q9H6W3 641 aa14.41□□□□□ -0.1
COL12A1-205ENST00000425443 JADE2Q9NQC1 790 aa14.41□□□□□ -0.1
COL12A1-205ENST00000425443 DDX4Q9NQI0 724 aaKnown RBP14.41□□□□□ -0.1
COL12A1-205ENST00000425443 ATP6V0A2Q9Y487 856 aa14.41□□□□□ -0.1
COL12A1-205ENST00000425443 IPO7O95373 1038 aaKnown RBP14.4□□□□□ -0.1
COL12A1-205ENST00000425443 MATR3P43243 847 aaKnown RBP eCLIP14.4□□□□□ -0.1
COL12A1-205ENST00000425443 ENOX2Q16206 610 aaKnown RBP14.4□□□□□ -0.1
COL12A1-205ENST00000425443 MEA1Q16626 185 aa14.4□□□□□ -0.1
COL12A1-205ENST00000425443 KRT79Q5XKE5 535 aa14.4□□□□□ -0.1
COL12A1-205ENST00000425443 NOC3LQ8WTT2 800 aaKnown RBP14.4□□□□□ -0.1
COL12A1-205ENST00000425443 TEKT1Q969V4 418 aa14.4□□□□□ -0.1
COL12A1-205ENST00000425443 NHEJ1Q9H9Q4 299 aaPredicted RBP14.4□□□□□ -0.1
COL12A1-205ENST00000425443 A0A1W2PQC6 194 aa14.4□□□□□ -0.1
COL12A1-205ENST00000425443 hCG_1984214I3L0E3 225 aa14.4□□□□□ -0.1
COL12A1-205ENST00000425443 TDP2O95551 362 aa14.4□□□□□ -0.1
COL12A1-205ENST00000425443 SRGNP10124 158 aa14.4□□□□□ -0.1
COL12A1-205ENST00000425443 DNM2P50570 870 aa14.4□□□□□ -0.1
COL12A1-205ENST00000425443 LRRC41Q15345 812 aa14.4□□□□□ -0.1
COL12A1-205ENST00000425443 EZH2Q15910 746 aaKnown RBP14.4□□□□□ -0.1
COL12A1-205ENST00000425443 UBE2SQ16763 222 aa14.4□□□□□ -0.1
COL12A1-205ENST00000425443 PAPD7Q5XG87 772 aaKnown RBP14.4□□□□□ -0.1
COL12A1-205ENST00000425443 KCTD1Q719H9 257 aa14.4□□□□□ -0.1
COL12A1-205ENST00000425443 ZNF713Q8N859 430 aaPredicted RBP14.4□□□□□ -0.1
COL12A1-205ENST00000425443 JRKLQ9Y4A0 524 aa14.4□□□□□ -0.1
COL12A1-205ENST00000425443 SAR1BQ9Y6B6 198 aa14.4□□□□□ -0.1
COL12A1-205ENST00000425443 POTEMA6NI47 508 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms