RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 PRAMEF19Q5SWL8 479 aa17.78■□□□□ 0.44
SHOX2-202ENST00000425436 SLAIN1Q8ND83 568 aa17.78■□□□□ 0.44
SHOX2-202ENST00000425436 CUL5Q93034 780 aa17.78■□□□□ 0.44
SHOX2-202ENST00000425436 FOXP1Q9H334 677 aaPredicted RBP17.78■□□□□ 0.44
SHOX2-202ENST00000425436 RIC8AQ9NPQ8 531 aa17.78■□□□□ 0.44
SHOX2-202ENST00000425436 KCNJ14Q9UNX9 436 aa17.78■□□□□ 0.44
SHOX2-202ENST00000425436 MRPL12P52815 198 aaKnown RBP17.77■□□□□ 0.44
SHOX2-202ENST00000425436 NLRP5P59047 1200 aa17.77■□□□□ 0.44
SHOX2-202ENST00000425436 GHRHRQ02643 423 aa17.77■□□□□ 0.44
SHOX2-202ENST00000425436 STK38Q15208 465 aa17.77■□□□□ 0.44
SHOX2-202ENST00000425436 ADALQ6DHV7 355 aa17.77■□□□□ 0.44
SHOX2-202ENST00000425436 PPP1R18Q6NYC8 613 aa17.77■□□□□ 0.44
SHOX2-202ENST00000425436 LINC00301Q8NCQ3 95 aa17.77■□□□□ 0.44
SHOX2-202ENST00000425436 PGBD1Q96JS3 809 aa17.77■□□□□ 0.44
SHOX2-202ENST00000425436 RMDN3Q96TC7 470 aa17.77■□□□□ 0.44
SHOX2-202ENST00000425436 TINF2Q9BSI4 451 aa17.77■□□□□ 0.44
SHOX2-202ENST00000425436 RBSNQ9H1K0 784 aa17.77■□□□□ 0.44
SHOX2-202ENST00000425436 TMEM260Q9NX78 707 aa17.77■□□□□ 0.44
SHOX2-202ENST00000425436 MAP3K20Q9NYL2 800 aaKnown RBP17.77■□□□□ 0.44
SHOX2-202ENST00000425436 PIK3CDO00329 1044 aa17.77■□□□□ 0.43
SHOX2-202ENST00000425436 CCDC192P0DO97 292 aa17.77■□□□□ 0.43
SHOX2-202ENST00000425436 ME1P48163 572 aa17.77■□□□□ 0.43
SHOX2-202ENST00000425436 ALDH5A1P51649 535 aaPredicted RBP17.77■□□□□ 0.43
SHOX2-202ENST00000425436 UBXN2AP68543 259 aa17.77■□□□□ 0.43
SHOX2-202ENST00000425436 CCDC173Q0VFZ6 552 aa17.77■□□□□ 0.43
SHOX2-202ENST00000425436 ARHGEF16Q5VV41 709 aa17.77■□□□□ 0.43
SHOX2-202ENST00000425436 OLFML2BQ68BL8 750 aa17.77■□□□□ 0.43
SHOX2-202ENST00000425436 CCDC73Q6ZRK6 1079 aa17.77■□□□□ 0.43
SHOX2-202ENST00000425436 CCDC12Q8WUD4 166 aaPredicted RBP17.77■□□□□ 0.43
SHOX2-202ENST00000425436 ZMYND12Q9H0C1 365 aa17.77■□□□□ 0.43
SHOX2-202ENST00000425436 C6orf50Q9HD87 102 aa17.77■□□□□ 0.43
SHOX2-202ENST00000425436 SH3GLB2Q9NR46 395 aa17.77■□□□□ 0.43
SHOX2-202ENST00000425436 ADD3Q9UEY8 706 aaKnown RBP17.77■□□□□ 0.43
SHOX2-202ENST00000425436 IGHA2P01877 340 aa17.76■□□□□ 0.43
SHOX2-202ENST00000425436 MMP1P03956 469 aa17.76■□□□□ 0.43
SHOX2-202ENST00000425436 HMGCRP04035 888 aa17.76■□□□□ 0.43
SHOX2-202ENST00000425436 INHAP05111 366 aa17.76■□□□□ 0.43
SHOX2-202ENST00000425436 EIF2AK2P19525 551 aaKnown RBP17.76■□□□□ 0.43
SHOX2-202ENST00000425436 MFSD14CQ5VZR4 134 aa17.76■□□□□ 0.43
SHOX2-202ENST00000425436 ANO1Q5XXA6 986 aa17.76■□□□□ 0.43
SHOX2-202ENST00000425436 ARMCX2Q7L311 632 aa17.76■□□□□ 0.43
SHOX2-202ENST00000425436 ZNF467Q7Z7K2 595 aaPredicted RBP17.76■□□□□ 0.43
SHOX2-202ENST00000425436 TRMT44Q8IYL2 757 aaKnown RBP17.76■□□□□ 0.43
SHOX2-202ENST00000425436 SAMD3Q8N6K7 520 aa17.76■□□□□ 0.43
SHOX2-202ENST00000425436 ZFP91Q96JP5 570 aaPredicted RBP17.76■□□□□ 0.43
SHOX2-202ENST00000425436 MAF1Q9H063 256 aa17.76■□□□□ 0.43
SHOX2-202ENST00000425436 TNMDQ9H2S6 317 aa17.76■□□□□ 0.43
SHOX2-202ENST00000425436 CLSTN2Q9H4D0 955 aa17.76■□□□□ 0.43
SHOX2-202ENST00000425436 DACT1Q9NYF0 836 aa17.76■□□□□ 0.43
SHOX2-202ENST00000425436 SPTLC2O15270 562 aa17.75■□□□□ 0.43
SHOX2-202ENST00000425436 SNAI1O95863 264 aaPredicted RBP17.75■□□□□ 0.43
SHOX2-202ENST00000425436 LIG1P18858 919 aa17.75■□□□□ 0.43
SHOX2-202ENST00000425436 CEBPZQ03701 1054 aaKnown RBP17.75■□□□□ 0.43
SHOX2-202ENST00000425436 CACNB2Q08289 660 aaPredicted RBP17.75■□□□□ 0.43
SHOX2-202ENST00000425436 JAKMIP3Q5VZ66 844 aa17.75■□□□□ 0.43
SHOX2-202ENST00000425436 MAMDC4Q6UXC1 1216 aa17.75■□□□□ 0.43
SHOX2-202ENST00000425436 EEPD1Q7L9B9 569 aa17.75■□□□□ 0.43
SHOX2-202ENST00000425436 FAM177A1Q8N128 213 aaPredicted RBP17.75■□□□□ 0.43
SHOX2-202ENST00000425436 CCDC148Q8NFR7 591 aa17.75■□□□□ 0.43
SHOX2-202ENST00000425436 DNERQ8NFT8 737 aa17.75■□□□□ 0.43
SHOX2-202ENST00000425436 RASGRP4Q8TDF6 673 aa17.75■□□□□ 0.43
SHOX2-202ENST00000425436 NSUN6Q8TEA1 469 aaKnown RBP17.75■□□□□ 0.43
SHOX2-202ENST00000425436 PXMP2Q9NR77 195 aa17.75■□□□□ 0.43
SHOX2-202ENST00000425436 TCHHQ07283 1943 aa17.74■□□□□ 0.43
SHOX2-202ENST00000425436 ESYT2A0FGR8 921 aa17.74■□□□□ 0.43
SHOX2-202ENST00000425436 ASB14A6NK59 587 aa17.74■□□□□ 0.43
SHOX2-202ENST00000425436 PPP6R2O75170 966 aa17.74■□□□□ 0.43
SHOX2-202ENST00000425436 CAVIN2O95810 425 aa17.74■□□□□ 0.43
SHOX2-202ENST00000425436 PRKAR2AP13861 404 aaKnown RBP17.74■□□□□ 0.43
SHOX2-202ENST00000425436 GNA11P29992 359 aa17.74■□□□□ 0.43
SHOX2-202ENST00000425436 SLC39A14Q15043 492 aa17.74■□□□□ 0.43
SHOX2-202ENST00000425436 NOSTRINQ8IVI9 506 aa17.74■□□□□ 0.43
SHOX2-202ENST00000425436 PHF20Q9BVI0 1012 aa17.74■□□□□ 0.43
SHOX2-202ENST00000425436 BRMS1Q9HCU9 246 aa17.74■□□□□ 0.43
SHOX2-202ENST00000425436 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.74■□□□□ 0.43
SHOX2-202ENST00000425436 PCDHA6Q9UN73 950 aa17.74■□□□□ 0.43
SHOX2-202ENST00000425436 PCDHA8Q9Y5H6 950 aa17.74■□□□□ 0.43
SHOX2-202ENST00000425436 BRCA2P51587 3418 aa17.73■□□□□ 0.43
SHOX2-202ENST00000425436 SPDYE3A6NKU9 549 aa17.73■□□□□ 0.43
SHOX2-202ENST00000425436 MYCLP12524 364 aaPredicted RBP17.73■□□□□ 0.43
SHOX2-202ENST00000425436 CLK2P49760 499 aaKnown RBP17.73■□□□□ 0.43
SHOX2-202ENST00000425436 FAM160A1Q05DH4 1040 aa17.73■□□□□ 0.43
SHOX2-202ENST00000425436 MTFR1Q15390 333 aa17.73■□□□□ 0.43
SHOX2-202ENST00000425436 RILPL1Q5EBL4 403 aa17.73■□□□□ 0.43
SHOX2-202ENST00000425436 RBM43Q6ZSC3 357 aaKnown RBP17.73■□□□□ 0.43
SHOX2-202ENST00000425436 TRPV1Q8NER1 839 aa17.73■□□□□ 0.43
SHOX2-202ENST00000425436 IL31RAQ8NI17 732 aa17.73■□□□□ 0.43
SHOX2-202ENST00000425436 PANK2Q9BZ23 570 aa17.73■□□□□ 0.43
SHOX2-202ENST00000425436 PCDHA4Q9UN74 947 aa17.73■□□□□ 0.43
SHOX2-202ENST00000425436 KIF28PB7ZC32 967 aa17.72■□□□□ 0.43
SHOX2-202ENST00000425436 NR3C2P08235 984 aa17.72■□□□□ 0.43
SHOX2-202ENST00000425436 CCND3P30281 292 aaPredicted RBP17.72■□□□□ 0.43
SHOX2-202ENST00000425436 PDE4DQ08499 809 aa17.72■□□□□ 0.43
SHOX2-202ENST00000425436 PGM5Q15124 567 aa17.72■□□□□ 0.43
SHOX2-202ENST00000425436 NPY5RQ15761 445 aa17.72■□□□□ 0.43
SHOX2-202ENST00000425436 TPRNQ4KMQ1 711 aa17.72■□□□□ 0.43
SHOX2-202ENST00000425436 BLIDQ8IZY5 108 aa17.72■□□□□ 0.43
SHOX2-202ENST00000425436 REXO1Q8N1G1 1221 aaKnown RBP17.72■□□□□ 0.43
SHOX2-202ENST00000425436 MSL3Q8N5Y2 521 aaKnown RBP17.72■□□□□ 0.43
SHOX2-202ENST00000425436 MRPS27Q92552 414 aaKnown RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms