RNA–Protein interactions for RNA: ENST00000425071.5

HDAC9-209, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-209ENST00000425071 KRTAP19-1Q8IUB9 90 aa5.75□□□□□ -1.49
HDAC9-209ENST00000425071 SEC14L1Q92503 715 aa5.75□□□□□ -1.49
HDAC9-209ENST00000425071 TSPAN17Q96FV3 270 aa5.75□□□□□ -1.49
HDAC9-209ENST00000425071 CHAMP1Q96JM3 812 aa5.75□□□□□ -1.49
HDAC9-209ENST00000425071 EXOC2Q96KP1 924 aa5.75□□□□□ -1.49
HDAC9-209ENST00000425071 MRPL4Q9BYD3 311 aaKnown RBP5.75□□□□□ -1.49
HDAC9-209ENST00000425071 MCOLN1Q9GZU1 580 aa5.75□□□□□ -1.49
HDAC9-209ENST00000425071 AP5M1Q9H0R1 490 aa5.75□□□□□ -1.49
HDAC9-209ENST00000425071 MYOCOSA0A1B0GUC4 107 aa5.74□□□□□ -1.49
HDAC9-209ENST00000425071 NFIBO00712 420 aa5.74□□□□□ -1.49
HDAC9-209ENST00000425071 KCNQ2O43526 872 aa5.74□□□□□ -1.49
HDAC9-209ENST00000425071 DGKIO75912 1065 aa5.74□□□□□ -1.49
HDAC9-209ENST00000425071 TSPAN15O95858 294 aa5.74□□□□□ -1.49
HDAC9-209ENST00000425071 NTRK1P04629 796 aa5.74□□□□□ -1.49
HDAC9-209ENST00000425071 LCP1P13796 627 aa5.74□□□□□ -1.49
HDAC9-209ENST00000425071 TARBP2Q15633 366 aaKnown RBP5.74□□□□□ -1.49
HDAC9-209ENST00000425071 PLEKHN1Q494U1 663 aaPredicted RBP5.74□□□□□ -1.49
HDAC9-209ENST00000425071 TRIM61Q5EBN2 209 aa5.74□□□□□ -1.49
HDAC9-209ENST00000425071 TEX2Q8IWB9 1127 aa5.74□□□□□ -1.49
HDAC9-209ENST00000425071 ALG1Q9BT22 464 aa5.74□□□□□ -1.49
HDAC9-209ENST00000425071 RNF38Q9H0F5 515 aa5.74□□□□□ -1.49
HDAC9-209ENST00000425071 EPB41L1Q9H4G0 881 aa5.74□□□□□ -1.49
HDAC9-209ENST00000425071 BTG4Q9NY30 223 aa5.74□□□□□ -1.49
HDAC9-209ENST00000425071 CLDND1Q9NY35 253 aa5.74□□□□□ -1.49
HDAC9-209ENST00000425071 NUB1Q9Y5A7 615 aa5.74□□□□□ -1.49
HDAC9-209ENST00000425071 PTCH2Q9Y6C5 1203 aa5.74□□□□□ -1.49
HDAC9-209ENST00000425071 C6orf222P0C671 652 aaPredicted RBP5.73□□□□□ -1.49
HDAC9-209ENST00000425071 SDHBP21912 280 aa5.73□□□□□ -1.49
HDAC9-209ENST00000425071 CYP4F22Q6NT55 531 aa5.73□□□□□ -1.49
HDAC9-209ENST00000425071 SH3TC2Q8TF17 1288 aa5.73□□□□□ -1.49
HDAC9-209ENST00000425071 PIF1Q9H611 641 aa5.73□□□□□ -1.49
HDAC9-209ENST00000425071 TMEM260Q9NX78 707 aa5.73□□□□□ -1.49
HDAC9-209ENST00000425071 MBD1Q9UIS9 605 aaPredicted RBP5.73□□□□□ -1.49
HDAC9-209ENST00000425071 IRS2Q9Y4H2 1338 aa5.73□□□□□ -1.49
HDAC9-209ENST00000425071 NCAPD3P42695 1498 aa5.72□□□□□ -1.49
HDAC9-209ENST00000425071 ZC3H12DA2A288 527 aaKnown RBP5.72□□□□□ -1.49
HDAC9-209ENST00000425071 FAM47E-STBD1D6RA91 191 aa5.72□□□□□ -1.49
HDAC9-209ENST00000425071 KRIT1O00522 736 aa5.72□□□□□ -1.49
HDAC9-209ENST00000425071 WNT9AO14904 365 aa5.72□□□□□ -1.49
HDAC9-209ENST00000425071 PLD2O14939 933 aa5.72□□□□□ -1.49
HDAC9-209ENST00000425071 HGSO14964 777 aaPredicted RBP5.72□□□□□ -1.49
HDAC9-209ENST00000425071 N4BP3O15049 544 aa5.72□□□□□ -1.49
HDAC9-209ENST00000425071 GSTA4O15217 222 aa5.72□□□□□ -1.49
HDAC9-209ENST00000425071 PFKLP17858 780 aa5.72□□□□□ -1.49
HDAC9-209ENST00000425071 RAP1GAPP47736 663 aa5.72□□□□□ -1.49
HDAC9-209ENST00000425071 DLG4P78352 724 aa5.72□□□□□ -1.49
HDAC9-209ENST00000425071 PRR5P85299 388 aa5.72□□□□□ -1.49
HDAC9-209ENST00000425071 EMC4Q5J8M3 183 aa5.72□□□□□ -1.49
HDAC9-209ENST00000425071 KCNT2Q6UVM3 1135 aa5.72□□□□□ -1.49
HDAC9-209ENST00000425071 TMC6Q7Z403 805 aa5.72□□□□□ -1.49
HDAC9-209ENST00000425071 NLRP10Q86W26 655 aa5.72□□□□□ -1.49
HDAC9-209ENST00000425071 PHOSPHO1Q8TCT1 267 aa5.72□□□□□ -1.49
HDAC9-209ENST00000425071 PANK1Q8TE04 598 aa5.72□□□□□ -1.49
HDAC9-209ENST00000425071 CDIP1Q9H305 208 aa5.72□□□□□ -1.49
HDAC9-209ENST00000425071 PCDH18Q9HCL0 1135 aa5.72□□□□□ -1.49
HDAC9-209ENST00000425071 FBLN5Q9UBX5 448 aa5.72□□□□□ -1.49
HDAC9-209ENST00000425071 SMARCA2P51531 1590 aa5.72□□□□□ -1.49
HDAC9-209ENST00000425071 CECR2Q9BXF3 1484 aa5.71□□□□□ -1.49
HDAC9-209ENST00000425071 TCAF2A6NFQ2 919 aa5.71□□□□□ -1.5
HDAC9-209ENST00000425071 ETV2O00321 342 aaPredicted RBP5.71□□□□□ -1.5
HDAC9-209ENST00000425071 NCAM1P13591 858 aa5.71□□□□□ -1.5
HDAC9-209ENST00000425071 FPR2P25090 351 aa5.71□□□□□ -1.5
HDAC9-209ENST00000425071 GRK2P25098 689 aa5.71□□□□□ -1.5
HDAC9-209ENST00000425071 GRK3P35626 688 aa5.71□□□□□ -1.5
HDAC9-209ENST00000425071 SPIRE1Q08AE8 756 aa5.71□□□□□ -1.5
HDAC9-209ENST00000425071 PAK1Q13153 545 aa5.71□□□□□ -1.5
HDAC9-209ENST00000425071 FNDC3BQ53EP0 1204 aaKnown RBP5.71□□□□□ -1.5
HDAC9-209ENST00000425071 ZNF648Q5T619 568 aaPredicted RBP5.71□□□□□ -1.5
HDAC9-209ENST00000425071 MTDHQ86UE4 582 aaKnown RBP5.71□□□□□ -1.5
HDAC9-209ENST00000425071 LDHDQ86WU2 507 aa5.71□□□□□ -1.5
HDAC9-209ENST00000425071 HOMER1Q86YM7 354 aa5.71□□□□□ -1.5
HDAC9-209ENST00000425071 GSTCDQ8NEC7 633 aa5.71□□□□□ -1.5
HDAC9-209ENST00000425071 MZB1Q8WU39 189 aa5.71□□□□□ -1.5
HDAC9-209ENST00000425071 CPA5Q8WXQ8 436 aa5.71□□□□□ -1.5
HDAC9-209ENST00000425071 CNTD2Q9H8S5 307 aa5.71□□□□□ -1.5
HDAC9-209ENST00000425071 NGRNQ9NPE2 291 aaKnown RBP5.71□□□□□ -1.5
HDAC9-209ENST00000425071 ZNF652Q9Y2D9 606 aa5.71□□□□□ -1.5
HDAC9-209ENST00000425071 BLACEA4D250 179 aa5.7□□□□□ -1.5
HDAC9-209ENST00000425071 BTBD11A6QL63 1104 aa5.7□□□□□ -1.5
HDAC9-209ENST00000425071 MSCO60682 206 aa5.7□□□□□ -1.5
HDAC9-209ENST00000425071 SOD2P04179 222 aa5.7□□□□□ -1.5
HDAC9-209ENST00000425071 SQSTM1Q13501 440 aa5.7□□□□□ -1.5
HDAC9-209ENST00000425071 ATG14Q6ZNE5 492 aa5.7□□□□□ -1.5
HDAC9-209ENST00000425071 ANKLE2Q86XL3 938 aa5.7□□□□□ -1.5
HDAC9-209ENST00000425071 TRIM48Q8IWZ4 208 aa5.7□□□□□ -1.5
HDAC9-209ENST00000425071 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.7□□□□□ -1.5
HDAC9-209ENST00000425071 APPBP2Q92624 585 aa5.7□□□□□ -1.5
HDAC9-209ENST00000425071 ALG3Q92685 438 aa5.7□□□□□ -1.5
HDAC9-209ENST00000425071 SIGLEC10Q96LC7 697 aa5.7□□□□□ -1.5
HDAC9-209ENST00000425071 RNPC3Q96LT9 517 aaKnown RBP5.7□□□□□ -1.5
HDAC9-209ENST00000425071 MAGEB10Q96LZ2 347 aaPredicted RBP5.7□□□□□ -1.5
HDAC9-209ENST00000425071 SMOC1Q9H4F8 434 aa5.7□□□□□ -1.5
HDAC9-209ENST00000425071 NCOA5Q9HCD5 579 aaKnown RBP5.7□□□□□ -1.5
HDAC9-209ENST00000425071 GCM1Q9NP62 436 aa5.7□□□□□ -1.5
HDAC9-209ENST00000425071 SLC6A20Q9NP91 592 aa5.7□□□□□ -1.5
HDAC9-209ENST00000425071 FBXL7Q9UJT9 491 aa5.7□□□□□ -1.5
HDAC9-209ENST00000425071 PCDHA5Q9Y5H7 936 aa5.7□□□□□ -1.5
HDAC9-209ENST00000425071 ATAD2BQ9ULI0 1458 aa5.7□□□□□ -1.5
HDAC9-209ENST00000425071 CC2D2AQ9P2K1 1620 aa5.7□□□□□ -1.5
HDAC9-209ENST00000425071 ASXL2Q76L83 1435 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms