RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 TCTN1Q2MV58 587 aa15.11■□□□□ 0.01
VRK3-203ENST00000424804 GDF6Q6KF10 455 aaPredicted RBP15.11■□□□□ 0.01
VRK3-203ENST00000424804 SEPT14Q6ZU15 432 aa15.11■□□□□ 0.01
VRK3-203ENST00000424804 DEFB128Q7Z7B8 93 aa15.11■□□□□ 0.01
VRK3-203ENST00000424804 SESTD1Q86VW0 696 aa15.11■□□□□ 0.01
VRK3-203ENST00000424804 KRT23Q9C075 422 aa15.11■□□□□ 0.01
VRK3-203ENST00000424804 GPHNQ9NQX3 736 aaPredicted RBP15.11■□□□□ 0.01
VRK3-203ENST00000424804 PXMP2Q9NR77 195 aa15.11■□□□□ 0.01
VRK3-203ENST00000424804 MRPL11Q9Y3B7 192 aaKnown RBP15.11■□□□□ 0.01
VRK3-203ENST00000424804 HAS3O00219 553 aa15.1■□□□□ 0.01
VRK3-203ENST00000424804 SGSM2O43147 1006 aa15.1■□□□□ 0.01
VRK3-203ENST00000424804 GH1P01241 217 aa15.1■□□□□ 0.01
VRK3-203ENST00000424804 NR3C2P08235 984 aa15.1■□□□□ 0.01
VRK3-203ENST00000424804 CYP21A2P08686 494 aa15.1■□□□□ 0.01
VRK3-203ENST00000424804 HOXD8P13378 290 aaPredicted RBP15.1■□□□□ 0.01
VRK3-203ENST00000424804 ATP2A2P16615 1042 aaKnown RBP15.1■□□□□ 0.01
VRK3-203ENST00000424804 HIC1Q14526 733 aa15.1■□□□□ 0.01
VRK3-203ENST00000424804 STXBP2Q15833 593 aa15.1■□□□□ 0.01
VRK3-203ENST00000424804 FAM47CQ5HY64 1035 aa15.1■□□□□ 0.01
VRK3-203ENST00000424804 TRAF7Q6Q0C0 670 aa15.1■□□□□ 0.01
VRK3-203ENST00000424804 STOX1Q6ZVD7 989 aa15.1■□□□□ 0.01
VRK3-203ENST00000424804 MCF2L2Q86YR7 1114 aa15.1■□□□□ 0.01
VRK3-203ENST00000424804 EMID1Q96A84 441 aaPredicted RBP15.1■□□□□ 0.01
VRK3-203ENST00000424804 GAS2L1Q99501 681 aaPredicted RBP15.1■□□□□ 0.01
VRK3-203ENST00000424804 MPHOSPH6Q99547 160 aaKnown RBP15.1■□□□□ 0.01
VRK3-203ENST00000424804 MTIF3Q9H2K0 278 aaKnown RBP15.1■□□□□ 0.01
VRK3-203ENST00000424804 SLC28A3Q9HAS3 691 aa15.1■□□□□ 0.01
VRK3-203ENST00000424804 EPOPA6NHQ4 379 aa15.09■□□□□ 0.01
VRK3-203ENST00000424804 B4DLN1 442 aa15.09■□□□□ 0.01
VRK3-203ENST00000424804 KLRF2D3W0D1 207 aa15.09■□□□□ 0.01
VRK3-203ENST00000424804 CYTH3O43739 400 aa15.09■□□□□ 0.01
VRK3-203ENST00000424804 EIF3JO75822 258 aaKnown RBP15.09■□□□□ 0.01
VRK3-203ENST00000424804 EIF2AK2P19525 551 aaKnown RBP15.09■□□□□ 0.01
VRK3-203ENST00000424804 RFC2P35250 354 aa15.09■□□□□ 0.01
VRK3-203ENST00000424804 MRPL12P52815 198 aaKnown RBP15.09■□□□□ 0.01
VRK3-203ENST00000424804 RBL2Q08999 1139 aa15.09■□□□□ 0.01
VRK3-203ENST00000424804 BRDTQ58F21 947 aaPredicted RBP15.09■□□□□ 0.01
VRK3-203ENST00000424804 TJAP1Q5JTD0 557 aa15.09■□□□□ 0.01
VRK3-203ENST00000424804 IFIT1BQ5T764 474 aaKnown RBP15.09■□□□□ 0.01
VRK3-203ENST00000424804 PPM1EQ8WY54 764 aa15.09■□□□□ 0.01
VRK3-203ENST00000424804 PDCD2LQ9BRP1 358 aa15.09■□□□□ 0.01
VRK3-203ENST00000424804 RIOX1Q9H6W3 641 aa15.09■□□□□ 0.01
VRK3-203ENST00000424804 CNNM2Q9H8M5 875 aa15.09■□□□□ 0.01
VRK3-203ENST00000424804 ZBBXA8MT70 800 aa15.08■□□□□ 0
VRK3-203ENST00000424804 RFXAPO00287 272 aa15.08■□□□□ 0
VRK3-203ENST00000424804 CFBP00751 764 aa15.08■□□□□ 0
VRK3-203ENST00000424804 POU3F3P20264 500 aaPredicted RBP15.08■□□□□ 0
VRK3-203ENST00000424804 SP2Q02086 613 aa15.08■□□□□ 0
VRK3-203ENST00000424804 CCDC85BQ15834 202 aaPredicted RBP15.08■□□□□ 0
VRK3-203ENST00000424804 PTGISQ16647 500 aa15.08■□□□□ 0
VRK3-203ENST00000424804 TRIM71Q2Q1W2 868 aaKnown RBP15.08■□□□□ 0
VRK3-203ENST00000424804 BMP2KLQ5H9B9 411 aa15.08■□□□□ 0
VRK3-203ENST00000424804 ARHGEF16Q5VV41 709 aa15.08■□□□□ 0
VRK3-203ENST00000424804 SPRED2Q7Z698 418 aa15.08■□□□□ 0
VRK3-203ENST00000424804 VSIG10LQ86VR7 867 aa15.08■□□□□ 0
VRK3-203ENST00000424804 IL31RAQ8NI17 732 aa15.08■□□□□ 0
VRK3-203ENST00000424804 WNT8BQ93098 351 aa15.08■□□□□ 0
VRK3-203ENST00000424804 AMNQ9BXJ7 453 aa15.08■□□□□ 0
VRK3-203ENST00000424804 BCAS3Q9H6U6 928 aa15.08■□□□□ 0
VRK3-203ENST00000424804 HDAC6Q9UBN7 1215 aa15.08■□□□□ 0
VRK3-203ENST00000424804 U3KPZ7 1027 aaPredicted RBP15.08■□□□□ 0
VRK3-203ENST00000424804 BDP1A6H8Y1 2624 aa15.07■□□□□ 0
VRK3-203ENST00000424804 ZBTB5O15062 677 aa15.07■□□□□ 0
VRK3-203ENST00000424804 ANTXR2P58335 489 aa15.07■□□□□ 0
VRK3-203ENST00000424804 TROAPQ12815 778 aa15.07■□□□□ 0
VRK3-203ENST00000424804 TRDNQ13061 729 aa15.07■□□□□ 0
VRK3-203ENST00000424804 COL9A3Q14050 684 aaPredicted RBP15.07■□□□□ 0
VRK3-203ENST00000424804 GRM4Q14833 912 aa15.07■□□□□ 0
VRK3-203ENST00000424804 MYSM1Q5VVJ2 828 aa15.07■□□□□ 0
VRK3-203ENST00000424804 CASC1Q6TDU7 716 aa15.07■□□□□ 0
VRK3-203ENST00000424804 CHST3Q7LGC8 479 aa15.07■□□□□ 0
VRK3-203ENST00000424804 PHOSPHO2Q8TCD6 241 aa15.07■□□□□ 0
VRK3-203ENST00000424804 GPKOWQ92917 476 aaPredicted RBP eCLIP15.07■□□□□ 0
VRK3-203ENST00000424804 ESYT1Q9BSJ8 1104 aa15.07■□□□□ 0
VRK3-203ENST00000424804 UBAC1Q9BSL1 405 aa15.07■□□□□ 0
VRK3-203ENST00000424804 ANO2Q9NQ90 1003 aa15.07■□□□□ 0
VRK3-203ENST00000424804 PPP4R2Q9NY27 417 aa15.07■□□□□ 0
VRK3-203ENST00000424804 GTF2IRD1Q9UHL9 959 aa15.07■□□□□ 0
VRK3-203ENST00000424804 NBNO60934 754 aa15.06■□□□□ 0
VRK3-203ENST00000424804 F2P00734 622 aa15.06■□□□□ 0
VRK3-203ENST00000424804 CXCL10P02778 98 aa15.06■□□□□ 0
VRK3-203ENST00000424804 CA3P07451 260 aa15.06■□□□□ 0
VRK3-203ENST00000424804 CASTP20810 708 aaKnown RBP15.06■□□□□ 0
VRK3-203ENST00000424804 IGFBP4P22692 258 aa15.06■□□□□ 0
VRK3-203ENST00000424804 HOXA13P31271 388 aaPredicted RBP15.06■□□□□ 0
VRK3-203ENST00000424804 PSEN2P49810 448 aa15.06■□□□□ 0
VRK3-203ENST00000424804 ZNF200P98182 395 aaPredicted RBP15.06■□□□□ 0
VRK3-203ENST00000424804 TAP1Q03518 808 aa15.06■□□□□ 0
VRK3-203ENST00000424804 BFSP2Q13515 415 aa15.06■□□□□ 0
VRK3-203ENST00000424804 MBTPS1Q14703 1052 aa15.06■□□□□ 0
VRK3-203ENST00000424804 PGM5Q15124 567 aa15.06■□□□□ 0
VRK3-203ENST00000424804 PPP2R2DQ66LE6 453 aa15.06■□□□□ 0
VRK3-203ENST00000424804 RALYLQ86SE5 291 aaKnown RBP15.06■□□□□ 0
VRK3-203ENST00000424804 RETREG2Q8NC44 543 aa15.06■□□□□ 0
VRK3-203ENST00000424804 PPTC7Q8NI37 304 aa15.06■□□□□ 0
VRK3-203ENST00000424804 IGDCC4Q8TDY8 1250 aa15.06■□□□□ 0
VRK3-203ENST00000424804 AFAP1L1Q8TED9 768 aa15.06■□□□□ 0
VRK3-203ENST00000424804 ATXN2LQ8WWM7 1075 aaKnown RBP15.06■□□□□ 0
VRK3-203ENST00000424804 SYMPKQ92797 1274 aaKnown RBP15.06■□□□□ 0
VRK3-203ENST00000424804 ZFP91Q96JP5 570 aaPredicted RBP15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms