RNA–Protein interactions for RNA: ENST00000424766.5

PMS1-211, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 3

Gene PMS1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-211ENST00000424766 AKR1A1P14550 325 aa23.55■■□□□ 1.36
PMS1-211ENST00000424766 CAPN2P17655 700 aa23.55■■□□□ 1.36
PMS1-211ENST00000424766 SREBF1P36956 1147 aa23.55■■□□□ 1.36
PMS1-211ENST00000424766 CCDC144BQ3MJ40 725 aa23.55■■□□□ 1.36
PMS1-211ENST00000424766 FBXO18Q8NFZ0 1043 aa23.55■■□□□ 1.36
PMS1-211ENST00000424766 RASGRP4Q8TDF6 673 aa23.55■■□□□ 1.36
PMS1-211ENST00000424766 KRT2P35908 639 aa23.54■■□□□ 1.36
PMS1-211ENST00000424766 MRPS9P82933 396 aaKnown RBP23.54■■□□□ 1.36
PMS1-211ENST00000424766 KRT25Q7Z3Z0 450 aa23.54■■□□□ 1.36
PMS1-211ENST00000424766 FBXO16Q8IX29 292 aaPredicted RBP23.54■■□□□ 1.36
PMS1-211ENST00000424766 PGBD1Q96JS3 809 aa23.54■■□□□ 1.36
PMS1-211ENST00000424766 PDGFCQ9NRA1 345 aa23.54■■□□□ 1.36
PMS1-211ENST00000424766 DDX20Q9UHI6 824 aaKnown RBP23.54■■□□□ 1.36
PMS1-211ENST00000424766 FOSBP53539 338 aa23.53■■□□□ 1.36
PMS1-211ENST00000424766 SAFBQ15424 915 aaKnown RBP eCLIP23.53■■□□□ 1.36
PMS1-211ENST00000424766 SCFD2Q8WU76 684 aa23.53■■□□□ 1.36
PMS1-211ENST00000424766 CRYGNQ8WXF5 182 aa23.53■■□□□ 1.36
PMS1-211ENST00000424766 SGPL1O95470 568 aa23.52■■□□□ 1.36
PMS1-211ENST00000424766 CYP3A4P08684 503 aa23.52■■□□□ 1.36
PMS1-211ENST00000424766 ARHGAP4P98171 946 aa23.52■■□□□ 1.36
PMS1-211ENST00000424766 TNFAIP2Q03169 654 aa23.52■■□□□ 1.36
PMS1-211ENST00000424766 LHX8Q68G74 356 aa23.52■■□□□ 1.36
PMS1-211ENST00000424766 KCNV1Q6PIU1 500 aa23.52■■□□□ 1.36
PMS1-211ENST00000424766 SEPT14Q6ZU15 432 aa23.52■■□□□ 1.36
PMS1-211ENST00000424766 OXER1Q8TDS5 423 aa23.52■■□□□ 1.36
PMS1-211ENST00000424766 INPP4AQ96PE3 977 aaPredicted RBP23.52■■□□□ 1.36
PMS1-211ENST00000424766 DEFB118Q96PH6 123 aa23.52■■□□□ 1.36
PMS1-211ENST00000424766 FRMPD3Q5JV73 1810 aa23.52■■□□□ 1.36
PMS1-211ENST00000424766 DUSP11O75319 330 aaKnown RBP23.51■■□□□ 1.35
PMS1-211ENST00000424766 RGS20O76081 388 aa23.51■■□□□ 1.35
PMS1-211ENST00000424766 TGFB3P10600 412 aa23.51■■□□□ 1.35
PMS1-211ENST00000424766 ADCYAP1R1P41586 468 aa23.51■■□□□ 1.35
PMS1-211ENST00000424766 USP11P51784 963 aa23.51■■□□□ 1.35
PMS1-211ENST00000424766 GUCY1B3Q02153 619 aa23.51■■□□□ 1.35
PMS1-211ENST00000424766 TTLL4Q14679 1199 aa23.51■■□□□ 1.35
PMS1-211ENST00000424766 GNPTABQ3T906 1256 aa23.51■■□□□ 1.35
PMS1-211ENST00000424766 DIS3L2Q8IYB7 885 aaKnown RBP23.51■■□□□ 1.35
PMS1-211ENST00000424766 WDR11Q9BZH6 1224 aa23.51■■□□□ 1.35
PMS1-211ENST00000424766 RTEL1Q9NZ71 1219 aa23.51■■□□□ 1.35
PMS1-211ENST00000424766 UBIAD1Q9Y5Z9 338 aa23.51■■□□□ 1.35
PMS1-211ENST00000424766 KIAA0100Q14667 2235 aaKnown RBP23.51■■□□□ 1.35
PMS1-211ENST00000424766 CCDC194A0A1B0GVG4 234 aa23.5■■□□□ 1.35
PMS1-211ENST00000424766 BTBD18B2RXH4 712 aa23.5■■□□□ 1.35
PMS1-211ENST00000424766 NKRFO15226 690 aaKnown RBP eCLIP23.5■■□□□ 1.35
PMS1-211ENST00000424766 RARBP10826 455 aa23.5■■□□□ 1.35
PMS1-211ENST00000424766 ICAM3P32942 547 aa23.5■■□□□ 1.35
PMS1-211ENST00000424766 GJA8P48165 433 aa23.5■■□□□ 1.35
PMS1-211ENST00000424766 NONOQ15233 471 aaKnown RBP eCLIP23.5■■□□□ 1.35
PMS1-211ENST00000424766 DUSP28Q4G0W2 176 aa23.5■■□□□ 1.35
PMS1-211ENST00000424766 LARP1BQ659C4 914 aaKnown RBP23.5■■□□□ 1.35
PMS1-211ENST00000424766 CCDC62Q6P9F0 684 aa23.5■■□□□ 1.35
PMS1-211ENST00000424766 NLRX1Q86UT6 975 aa23.5■■□□□ 1.35
PMS1-211ENST00000424766 U2AF1L4Q8WU68 220 aaKnown RBP23.5■■□□□ 1.35
PMS1-211ENST00000424766 TNFRSF25Q93038 417 aa23.5■■□□□ 1.35
PMS1-211ENST00000424766 MXRA8Q9BRK3 442 aa23.5■■□□□ 1.35
PMS1-211ENST00000424766 CRISPLD2Q9H0B8 497 aa23.5■■□□□ 1.35
PMS1-211ENST00000424766 Q9Y3F1 56 aa23.5■■□□□ 1.35
PMS1-211ENST00000424766 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.49■■□□□ 1.35
PMS1-211ENST00000424766 MAFGO15525 162 aa23.49■■□□□ 1.35
PMS1-211ENST00000424766 SMPD1P17405 629 aa23.49■■□□□ 1.35
PMS1-211ENST00000424766 PDCP20941 246 aa23.49■■□□□ 1.35
PMS1-211ENST00000424766 NR5A1Q13285 461 aa23.49■■□□□ 1.35
PMS1-211ENST00000424766 TBCKQ8TEA7 893 aa23.49■■□□□ 1.35
PMS1-211ENST00000424766 GPRASP2Q96D09 838 aa23.49■■□□□ 1.35
PMS1-211ENST00000424766 ZFP91Q96JP5 570 aaPredicted RBP23.49■■□□□ 1.35
PMS1-211ENST00000424766 FOXP1Q9H334 677 aaPredicted RBP23.49■■□□□ 1.35
PMS1-211ENST00000424766 JADE2Q9NQC1 790 aa23.49■■□□□ 1.35
PMS1-211ENST00000424766 GNEQ9Y223 722 aaKnown RBP23.49■■□□□ 1.35
PMS1-211ENST00000424766 CCDC85CA6NKD9 419 aa23.48■■□□□ 1.35
PMS1-211ENST00000424766 SPATA31C2B4DYI2 1134 aa23.48■■□□□ 1.35
PMS1-211ENST00000424766 HSP90AA1P07900 732 aaKnown RBP23.48■■□□□ 1.35
PMS1-211ENST00000424766 TXNP10599 105 aaKnown RBP23.48■■□□□ 1.35
PMS1-211ENST00000424766 CIITAP33076 1130 aa23.48■■□□□ 1.35
PMS1-211ENST00000424766 ZNF76P36508 570 aa23.48■■□□□ 1.35
PMS1-211ENST00000424766 BECN1Q14457 450 aa23.48■■□□□ 1.35
PMS1-211ENST00000424766 CEP55Q53EZ4 464 aa23.48■■□□□ 1.35
PMS1-211ENST00000424766 NIPA1Q7RTP0 329 aa23.48■■□□□ 1.35
PMS1-211ENST00000424766 CDHR1Q96JP9 859 aa23.48■■□□□ 1.35
PMS1-211ENST00000424766 DDX41Q9UJV9 622 aaKnown RBP23.48■■□□□ 1.35
PMS1-211ENST00000424766 OGDHLQ9ULD0 1010 aa23.48■■□□□ 1.35
PMS1-211ENST00000424766 MEIS1O00470 390 aa23.47■■□□□ 1.35
PMS1-211ENST00000424766 ADCY6O43306 1168 aa23.47■■□□□ 1.35
PMS1-211ENST00000424766 FIBPO43427 364 aa23.47■■□□□ 1.35
PMS1-211ENST00000424766 TFRCP02786 760 aaKnown RBP23.47■■□□□ 1.35
PMS1-211ENST00000424766 ITGB5P18084 799 aa23.47■■□□□ 1.35
PMS1-211ENST00000424766 ANO1Q5XXA6 986 aa23.47■■□□□ 1.35
PMS1-211ENST00000424766 FOXD4L1Q9NU39 408 aa23.47■■□□□ 1.35
PMS1-211ENST00000424766 MRVI1Q9Y6F6 885 aa23.47■■□□□ 1.35
PMS1-211ENST00000424766 H3BQV1 296 aa23.46■■□□□ 1.35
PMS1-211ENST00000424766 EDIL3O43854 480 aa23.46■■□□□ 1.35
PMS1-211ENST00000424766 ARIH2O95376 493 aa23.46■■□□□ 1.35
PMS1-211ENST00000424766 NKX3-2P78367 333 aa23.46■■□□□ 1.35
PMS1-211ENST00000424766 INF2Q27J81 1249 aa23.46■■□□□ 1.35
PMS1-211ENST00000424766 IFFO2Q5TF58 517 aa23.46■■□□□ 1.35
PMS1-211ENST00000424766 PIK3AP1Q6ZUJ8 805 aa23.46■■□□□ 1.35
PMS1-211ENST00000424766 ARRDC4Q8NCT1 418 aa23.46■■□□□ 1.35
PMS1-211ENST00000424766 UPF3AQ9H1J1 476 aaKnown RBP23.46■■□□□ 1.35
PMS1-211ENST00000424766 XPNPEP3Q9NQH7 507 aa23.46■■□□□ 1.35
PMS1-211ENST00000424766 POTEFA5A3E0 1075 aa23.45■■□□□ 1.34
PMS1-211ENST00000424766 U2AF2P26368 475 aaKnown RBP eCLIP23.45■■□□□ 1.343e-7■■■■■ 27.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms