RNA–Protein interactions for RNA: ENST00000424438.5

RPUSD3-204, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2 BASIC

Gene RPUSD3, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-204ENST00000424438 COL4A6Q14031 1691 aa18.28■□□□□ 0.52
RPUSD3-204ENST00000424438 HOXD8P13378 290 aaPredicted RBP18.27■□□□□ 0.52
RPUSD3-204ENST00000424438 MX1P20591 662 aa18.27■□□□□ 0.52
RPUSD3-204ENST00000424438 PTK7Q13308 1070 aa18.27■□□□□ 0.52
RPUSD3-204ENST00000424438 FAM178BQ8IXR5 827 aa18.27■□□□□ 0.52
RPUSD3-204ENST00000424438 AFG1LQ8WV93 481 aa18.27■□□□□ 0.52
RPUSD3-204ENST00000424438 DHX38Q92620 1227 aaKnown RBP18.27■□□□□ 0.52
RPUSD3-204ENST00000424438 CHMP4CQ96CF2 233 aa18.27■□□□□ 0.52
RPUSD3-204ENST00000424438 FBXL18Q96ME1 805 aa18.27■□□□□ 0.52
RPUSD3-204ENST00000424438 ZBED2Q9BTP6 218 aa18.27■□□□□ 0.52
RPUSD3-204ENST00000424438 KATNAL1Q9BW62 490 aa18.27■□□□□ 0.52
RPUSD3-204ENST00000424438 SUGCTQ9HAC7 445 aa18.27■□□□□ 0.52
RPUSD3-204ENST00000424438 GPCPD1Q9NPB8 672 aa18.27■□□□□ 0.52
RPUSD3-204ENST00000424438 LCHNA4D1U4 455 aa18.26■□□□□ 0.51
RPUSD3-204ENST00000424438 CKBP12277 381 aa18.26■□□□□ 0.51
RPUSD3-204ENST00000424438 DGKDQ16760 1214 aa18.26■□□□□ 0.51
RPUSD3-204ENST00000424438 PUS10Q3MIT2 529 aaKnown RBP18.26■□□□□ 0.51
RPUSD3-204ENST00000424438 NSUN6Q8TEA1 469 aaKnown RBP18.26■□□□□ 0.51
RPUSD3-204ENST00000424438 EVI5LQ96CN4 794 aa18.26■□□□□ 0.51
RPUSD3-204ENST00000424438 MTMR7Q9Y216 660 aa18.26■□□□□ 0.51
RPUSD3-204ENST00000424438 FRMPD2Q68DX3 1309 aaPredicted RBP18.25■□□□□ 0.51
RPUSD3-204ENST00000424438 MYH6P13533 1939 aa18.25■□□□□ 0.51
RPUSD3-204ENST00000424438 LINC01553A4QN01 128 aa18.25■□□□□ 0.51
RPUSD3-204ENST00000424438 HAS3O00219 553 aa18.25■□□□□ 0.51
RPUSD3-204ENST00000424438 NBNO60934 754 aa18.25■□□□□ 0.51
RPUSD3-204ENST00000424438 F2P00734 622 aa18.25■□□□□ 0.51
RPUSD3-204ENST00000424438 FGAP02671 866 aa18.25■□□□□ 0.51
RPUSD3-204ENST00000424438 DEFB103AP81534 67 aa18.25■□□□□ 0.51
RPUSD3-204ENST00000424438 MKRN4PQ13434 485 aaPredicted RBP18.25■□□□□ 0.51
RPUSD3-204ENST00000424438 IKBKEQ14164 716 aa18.25■□□□□ 0.51
RPUSD3-204ENST00000424438 TRIM71Q2Q1W2 868 aaKnown RBP18.25■□□□□ 0.51
RPUSD3-204ENST00000424438 VPS53Q5VIR6 699 aa18.25■□□□□ 0.51
RPUSD3-204ENST00000424438 TRAF7Q6Q0C0 670 aa18.25■□□□□ 0.51
RPUSD3-204ENST00000424438 SPRED2Q7Z698 418 aa18.25■□□□□ 0.51
RPUSD3-204ENST00000424438 GDPD5Q8WTR4 605 aa18.25■□□□□ 0.51
RPUSD3-204ENST00000424438 SAMD11Q96NU1 681 aa18.25■□□□□ 0.51
RPUSD3-204ENST00000424438 CTNNA3Q9UI47 895 aa18.25■□□□□ 0.51
RPUSD3-204ENST00000424438 ABCB11O95342 1321 aa18.24■□□□□ 0.51
RPUSD3-204ENST00000424438 EMSYQ7Z589 1322 aa18.24■□□□□ 0.51
RPUSD3-204ENST00000424438 MYH7BA7E2Y1 1941 aa18.24■□□□□ 0.51
RPUSD3-204ENST00000424438 DCXO43602 365 aa18.24■□□□□ 0.51
RPUSD3-204ENST00000424438 STXBP2Q15833 593 aa18.24■□□□□ 0.51
RPUSD3-204ENST00000424438 DGKHQ86XP1 1220 aa18.24■□□□□ 0.51
RPUSD3-204ENST00000424438 MCF2L2Q86YR7 1114 aa18.24■□□□□ 0.51
RPUSD3-204ENST00000424438 MIER1Q8N108 512 aa18.24■□□□□ 0.51
RPUSD3-204ENST00000424438 PPTC7Q8NI37 304 aa18.24■□□□□ 0.51
RPUSD3-204ENST00000424438 SP7Q8TDD2 431 aaPredicted RBP18.24■□□□□ 0.51
RPUSD3-204ENST00000424438 SYTL5Q8TDW5 730 aaPredicted RBP18.24■□□□□ 0.51
RPUSD3-204ENST00000424438 INSL6Q9Y581 213 aa18.24■□□□□ 0.51
RPUSD3-204ENST00000424438 KCNA5P22460 613 aa18.23■□□□□ 0.51
RPUSD3-204ENST00000424438 HTRA4P83105 476 aaPredicted RBP18.23■□□□□ 0.51
RPUSD3-204ENST00000424438 GHRHRQ02643 423 aa18.23■□□□□ 0.51
RPUSD3-204ENST00000424438 LAMC2Q13753 1193 aa18.23■□□□□ 0.51
RPUSD3-204ENST00000424438 COL19A1Q14993 1142 aa18.23■□□□□ 0.51
RPUSD3-204ENST00000424438 CCDC178Q5BJE1 867 aa18.23■□□□□ 0.51
RPUSD3-204ENST00000424438 OTUD7AQ8TE49 926 aaPredicted RBP18.23■□□□□ 0.51
RPUSD3-204ENST00000424438 TOMM22Q9NS69 142 aa18.23■□□□□ 0.51
RPUSD3-204ENST00000424438 DDX41Q9UJV9 622 aaKnown RBP18.23■□□□□ 0.51
RPUSD3-204ENST00000424438 EIF3JO75822 258 aaKnown RBP18.22■□□□□ 0.51
RPUSD3-204ENST00000424438 PSEN2P49810 448 aa18.22■□□□□ 0.51
RPUSD3-204ENST00000424438 LY6KQ17RY6 165 aa18.22■□□□□ 0.51
RPUSD3-204ENST00000424438 MCMDC2Q4G0Z9 681 aa18.22■□□□□ 0.51
RPUSD3-204ENST00000424438 C7orf31Q8N865 590 aa18.22■□□□□ 0.51
RPUSD3-204ENST00000424438 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.22■□□□□ 0.51
RPUSD3-204ENST00000424438 NEK9Q8TD19 979 aa18.22■□□□□ 0.51
RPUSD3-204ENST00000424438 MRPL38Q96DV4 380 aaKnown RBP18.22■□□□□ 0.51
RPUSD3-204ENST00000424438 RNF41Q9H4P4 317 aaPredicted RBP18.22■□□□□ 0.51
RPUSD3-204ENST00000424438 HDAC6Q9UBN7 1215 aa18.22■□□□□ 0.51
RPUSD3-204ENST00000424438 ZNF318Q5VUA4 2279 aa18.21■□□□□ 0.51
RPUSD3-204ENST00000424438 LAMA4Q16363 1823 aa18.21■□□□□ 0.51
RPUSD3-204ENST00000424438 RALGAPA2Q2PPJ7 1873 aa18.21■□□□□ 0.51
RPUSD3-204ENST00000424438 LGR5O75473 907 aa18.21■□□□□ 0.51
RPUSD3-204ENST00000424438 HSPD1P10809 573 aaKnown RBP18.21■□□□□ 0.51
RPUSD3-204ENST00000424438 TIGD5Q53EQ6 642 aa18.21■□□□□ 0.51
RPUSD3-204ENST00000424438 RRP12Q5JTH9 1297 aaKnown RBP18.21■□□□□ 0.51
RPUSD3-204ENST00000424438 PTCRAQ6ISU1 281 aaPredicted RBP18.21■□□□□ 0.51
RPUSD3-204ENST00000424438 KCNV1Q6PIU1 500 aa18.21■□□□□ 0.51
RPUSD3-204ENST00000424438 SAMD3Q8N6K7 520 aa18.21■□□□□ 0.51
RPUSD3-204ENST00000424438 PPP1R13LQ8WUF5 828 aa18.21■□□□□ 0.51
RPUSD3-204ENST00000424438 ANKS1AQ92625 1134 aa18.21■□□□□ 0.51
RPUSD3-204ENST00000424438 RMDN3Q96TC7 470 aa18.21■□□□□ 0.51
RPUSD3-204ENST00000424438 MAP3K20Q9NYL2 800 aaKnown RBP18.21■□□□□ 0.51
RPUSD3-204ENST00000424438 GRXCR2A6NFK2 248 aa18.2■□□□□ 0.5
RPUSD3-204ENST00000424438 PPFIA4O75335 1185 aa18.2■□□□□ 0.5
RPUSD3-204ENST00000424438 MBTPS1Q14703 1052 aa18.2■□□□□ 0.5
RPUSD3-204ENST00000424438 MFSD10Q14728 455 aa18.2■□□□□ 0.5
RPUSD3-204ENST00000424438 PTPROQ16827 1216 aa18.2■□□□□ 0.5
RPUSD3-204ENST00000424438 TCTN1Q2MV58 587 aa18.2■□□□□ 0.5
RPUSD3-204ENST00000424438 ZNF618Q5T7W0 954 aa18.2■□□□□ 0.5
RPUSD3-204ENST00000424438 MFSD6Q6ZSS7 791 aa18.2■□□□□ 0.5
RPUSD3-204ENST00000424438 SEPT14Q6ZU15 432 aa18.2■□□□□ 0.5
RPUSD3-204ENST00000424438 FBXO22Q8NEZ5 403 aa18.2■□□□□ 0.5
RPUSD3-204ENST00000424438 ESR2Q92731 530 aa18.2■□□□□ 0.5
RPUSD3-204ENST00000424438 MFSD14AQ96MC6 490 aa18.2■□□□□ 0.5
RPUSD3-204ENST00000424438 TAAR1Q96RJ0 339 aa18.2■□□□□ 0.5
RPUSD3-204ENST00000424438 MRPL11Q9Y3B7 192 aaKnown RBP18.2■□□□□ 0.5
RPUSD3-204ENST00000424438 CAND2O75155 1236 aa18.19■□□□□ 0.5
RPUSD3-204ENST00000424438 IL9P15248 144 aa18.19■□□□□ 0.5
RPUSD3-204ENST00000424438 HOXC8P31273 242 aa18.19■□□□□ 0.5
RPUSD3-204ENST00000424438 CDC37Q16543 378 aaPredicted RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms