RNA–Protein interactions for RNA: ENST00000424424.1

PRNP-202, Transcript of prion protein, humanhuman

TSL 1 (best)

Gene PRNP, Length 806 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-202ENST00000424424 TRIM60Q495X7 471 aa21.48■■□□□ 1.03
PRNP-202ENST00000424424 WWC2Q6AWC2 1192 aa21.48■■□□□ 1.03
PRNP-202ENST00000424424 TEX2Q8IWB9 1127 aa21.48■■□□□ 1.03
PRNP-202ENST00000424424 POLR3EQ9NVU0 708 aa21.48■■□□□ 1.03
PRNP-202ENST00000424424 MROH7Q68CQ1 1323 aa21.48■■□□□ 1.03
PRNP-202ENST00000424424 A0A0U1RQG5 324 aaPredicted RBP21.47■■□□□ 1.03
PRNP-202ENST00000424424 SPDYE3A6NKU9 549 aa21.47■■□□□ 1.03
PRNP-202ENST00000424424 ARIH2O95376 493 aa21.47■■□□□ 1.03
PRNP-202ENST00000424424 GH1P01241 217 aa21.47■■□□□ 1.03
PRNP-202ENST00000424424 PTGS1P23219 599 aa21.47■■□□□ 1.03
PRNP-202ENST00000424424 CCT2P78371 535 aaKnown RBP21.47■■□□□ 1.03
PRNP-202ENST00000424424 CCDC62Q6P9F0 684 aa21.47■■□□□ 1.03
PRNP-202ENST00000424424 GLT8D2Q9H1C3 349 aa21.47■■□□□ 1.03
PRNP-202ENST00000424424 EHMT1Q9H9B1 1298 aa21.47■■□□□ 1.03
PRNP-202ENST00000424424 BARHL2Q9NY43 387 aa21.47■■□□□ 1.03
PRNP-202ENST00000424424 FRMPD4Q14CM0 1322 aa21.47■■□□□ 1.03
PRNP-202ENST00000424424 PRPF3O43395 683 aaKnown RBP21.46■■□□□ 1.03
PRNP-202ENST00000424424 KPNA6O60684 536 aa21.46■■□□□ 1.03
PRNP-202ENST00000424424 SCG2P13521 617 aa21.46■■□□□ 1.03
PRNP-202ENST00000424424 ANKRD1Q15327 319 aa21.46■■□□□ 1.03
PRNP-202ENST00000424424 PFKFB3Q16875 520 aaPredicted RBP21.46■■□□□ 1.03
PRNP-202ENST00000424424 LY6KQ17RY6 165 aa21.46■■□□□ 1.03
PRNP-202ENST00000424424 GNPTABQ3T906 1256 aa21.46■■□□□ 1.03
PRNP-202ENST00000424424 XRRA1Q6P2D8 792 aa21.46■■□□□ 1.03
PRNP-202ENST00000424424 CXCL17Q6UXB2 119 aa21.46■■□□□ 1.03
PRNP-202ENST00000424424 IL31RAQ8NI17 732 aa21.46■■□□□ 1.03
PRNP-202ENST00000424424 COPS5Q92905 334 aa21.46■■□□□ 1.03
PRNP-202ENST00000424424 ALDH8A1Q9H2A2 487 aaPredicted RBP21.46■■□□□ 1.03
PRNP-202ENST00000424424 DDX41Q9UJV9 622 aaKnown RBP21.46■■□□□ 1.03
PRNP-202ENST00000424424 SMCO2A6NFE2 343 aa21.45■■□□□ 1.02
PRNP-202ENST00000424424 DCDC2CA8MYV0 355 aa21.45■■□□□ 1.02
PRNP-202ENST00000424424 STXBP3O00186 592 aa21.45■■□□□ 1.02
PRNP-202ENST00000424424 CPLX1O14810 134 aa21.45■■□□□ 1.02
PRNP-202ENST00000424424 PQBP1O60828 265 aaKnown RBP21.45■■□□□ 1.02
PRNP-202ENST00000424424 SEC24BO95487 1268 aa21.45■■□□□ 1.02
PRNP-202ENST00000424424 MYL3P08590 195 aa21.45■■□□□ 1.02
PRNP-202ENST00000424424 TGFB3P10600 412 aa21.45■■□□□ 1.02
PRNP-202ENST00000424424 IFNAR1P17181 557 aa21.45■■□□□ 1.02
PRNP-202ENST00000424424 TLE2Q04725 743 aa21.45■■□□□ 1.02
PRNP-202ENST00000424424 CPLX2Q6PUV4 134 aaKnown RBP21.45■■□□□ 1.02
PRNP-202ENST00000424424 CHRDL2Q6WN34 429 aa21.45■■□□□ 1.02
PRNP-202ENST00000424424 CCDC12Q8WUD4 166 aaPredicted RBP21.45■■□□□ 1.02
PRNP-202ENST00000424424 TOX2Q96NM4 488 aa21.45■■□□□ 1.02
PRNP-202ENST00000424424 RNF26Q9BY78 433 aaPredicted RBP21.45■■□□□ 1.02
PRNP-202ENST00000424424 SEZ6LQ9BYH1 1024 aa21.45■■□□□ 1.02
PRNP-202ENST00000424424 RIC8AQ9NPQ8 531 aa21.45■■□□□ 1.02
PRNP-202ENST00000424424 PRDM5Q9NQX1 630 aaPredicted RBP21.45■■□□□ 1.02
PRNP-202ENST00000424424 A6NJR5 290 aa21.44■■□□□ 1.02
PRNP-202ENST00000424424 ARVCFO00192 962 aa21.44■■□□□ 1.02
PRNP-202ENST00000424424 ADCY7P51828 1080 aa21.44■■□□□ 1.02
PRNP-202ENST00000424424 NTRK3Q16288 839 aa21.44■■□□□ 1.02
PRNP-202ENST00000424424 UBE2SQ16763 222 aa21.44■■□□□ 1.02
PRNP-202ENST00000424424 PCNX4Q63HM2 1172 aa21.44■■□□□ 1.02
PRNP-202ENST00000424424 ANKRD33Q7Z3H0 272 aa21.44■■□□□ 1.02
PRNP-202ENST00000424424 DHX37Q8IY37 1157 aaKnown RBP21.44■■□□□ 1.02
PRNP-202ENST00000424424 TRIM22Q8IYM9 498 aa21.44■■□□□ 1.02
PRNP-202ENST00000424424 PHKBQ93100 1093 aa21.44■■□□□ 1.02
PRNP-202ENST00000424424 IL17RAQ96F46 866 aa21.44■■□□□ 1.02
PRNP-202ENST00000424424 LBHD1Q9BQE6 289 aaPredicted RBP21.44■■□□□ 1.02
PRNP-202ENST00000424424 LARP6Q9BRS8 491 aaKnown RBP21.44■■□□□ 1.02
PRNP-202ENST00000424424 SLC26A6Q9BXS9 759 aa21.44■■□□□ 1.02
PRNP-202ENST00000424424 NCOA5Q9HCD5 579 aaKnown RBP21.44■■□□□ 1.02
PRNP-202ENST00000424424 PCDHA6Q9UN73 950 aa21.44■■□□□ 1.02
PRNP-202ENST00000424424 COLQQ9Y215 455 aaPredicted RBP21.44■■□□□ 1.02
PRNP-202ENST00000424424 PCDHA8Q9Y5H6 950 aa21.44■■□□□ 1.02
PRNP-202ENST00000424424 TLR3O15455 904 aaKnown RBP21.43■■□□□ 1.02
PRNP-202ENST00000424424 FOSP01100 380 aaPredicted RBP21.43■■□□□ 1.02
PRNP-202ENST00000424424 CLTBP09497 229 aa21.43■■□□□ 1.02
PRNP-202ENST00000424424 STK3Q13188 491 aa21.43■■□□□ 1.02
PRNP-202ENST00000424424 ITGA7Q13683 1181 aa21.43■■□□□ 1.02
PRNP-202ENST00000424424 LAMC2Q13753 1193 aa21.43■■□□□ 1.02
PRNP-202ENST00000424424 C8orf34Q49A92 452 aa21.43■■□□□ 1.02
PRNP-202ENST00000424424 ZFP91Q96JP5 570 aaPredicted RBP21.43■■□□□ 1.02
PRNP-202ENST00000424424 MTG1Q9BT17 334 aaPredicted RBP21.43■■□□□ 1.02
PRNP-202ENST00000424424 RTEL1Q9NZ71 1219 aa21.43■■□□□ 1.02
PRNP-202ENST00000424424 RGS20O76081 388 aa21.42■■□□□ 1.02
PRNP-202ENST00000424424 CDK7P50613 346 aa21.42■■□□□ 1.02
PRNP-202ENST00000424424 MRPS9P82933 396 aaKnown RBP21.42■■□□□ 1.02
PRNP-202ENST00000424424 PURAQ00577 322 aaKnown RBP21.42■■□□□ 1.02
PRNP-202ENST00000424424 ARHGAP1Q07960 439 aa21.42■■□□□ 1.02
PRNP-202ENST00000424424 SSRP1Q08945 709 aaKnown RBP21.42■■□□□ 1.02
PRNP-202ENST00000424424 TYW1BQ6NUM6 668 aa21.42■■□□□ 1.02
PRNP-202ENST00000424424 DNAH12Q6ZR08 3092 aa21.42■■□□□ 1.02
PRNP-202ENST00000424424 NLRX1Q86UT6 975 aa21.42■■□□□ 1.02
PRNP-202ENST00000424424 SLKQ9H2G2 1235 aaPredicted RBP21.42■■□□□ 1.02
PRNP-202ENST00000424424 FIBPO43427 364 aa21.41■■□□□ 1.02
PRNP-202ENST00000424424 ICAM3P32942 547 aa21.41■■□□□ 1.02
PRNP-202ENST00000424424 AFG1LQ8WV93 481 aa21.41■■□□□ 1.02
PRNP-202ENST00000424424 EMID1Q96A84 441 aaPredicted RBP21.41■■□□□ 1.02
PRNP-202ENST00000424424 INPP4AQ96PE3 977 aaPredicted RBP21.41■■□□□ 1.02
PRNP-202ENST00000424424 C6orf50Q9HD87 102 aa21.41■■□□□ 1.02
PRNP-202ENST00000424424 PDLIM7Q9NR12 457 aa21.41■■□□□ 1.02
PRNP-202ENST00000424424 TMEM39AQ9NV64 488 aa21.41■■□□□ 1.02
PRNP-202ENST00000424424 ESYT2A0FGR8 921 aa21.4■■□□□ 1.02
PRNP-202ENST00000424424 MMP3P08254 477 aa21.4■■□□□ 1.02
PRNP-202ENST00000424424 GNA11P29992 359 aa21.4■■□□□ 1.02
PRNP-202ENST00000424424 MAGEA10P43363 369 aaPredicted RBP21.4■■□□□ 1.02
PRNP-202ENST00000424424 NEK4P51957 841 aa21.4■■□□□ 1.02
PRNP-202ENST00000424424 AK2P54819 239 aa21.4■■□□□ 1.02
PRNP-202ENST00000424424 AP3B2Q13367 1082 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms