RNA–Protein interactions for RNA: ENST00000424265.5

USP54-205, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 5,201 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-205ENST00000424265 F13A1P00488 732 aa10.8□□□□□ -0.68
USP54-205ENST00000424265 CTAGE8P0CG41 777 aa10.8□□□□□ -0.68
USP54-205ENST00000424265 ROR2Q01974 943 aaKnown RBP10.8□□□□□ -0.68
USP54-205ENST00000424265 STIM1Q13586 685 aa10.8□□□□□ -0.68
USP54-205ENST00000424265 CASP8Q14790 479 aa10.8□□□□□ -0.68
USP54-205ENST00000424265 FAM47AQ5JRC9 791 aa10.8□□□□□ -0.68
USP54-205ENST00000424265 CTAGE6Q86UF2 777 aa10.8□□□□□ -0.68
USP54-205ENST00000424265 CTAGE4Q8IX94 777 aa10.8□□□□□ -0.68
USP54-205ENST00000424265 RNF26Q9BY78 433 aaPredicted RBP10.8□□□□□ -0.68
USP54-205ENST00000424265 IMPACTQ9P2X3 320 aa10.8□□□□□ -0.68
USP54-205ENST00000424265 PALD1Q9ULE6 856 aa10.8□□□□□ -0.68
USP54-205ENST00000424265 PCDHGA4Q9Y5G9 962 aa10.8□□□□□ -0.68
USP54-205ENST00000424265 PSMD7P51665 324 aa10.8□□□□□ -0.68
USP54-205ENST00000424265 MEFVO15553 781 aaPredicted RBP10.79□□□□□ -0.68
USP54-205ENST00000424265 RASA3Q14644 834 aa10.79□□□□□ -0.68
USP54-205ENST00000424265 CCDC144BQ3MJ40 725 aa10.79□□□□□ -0.68
USP54-205ENST00000424265 SPECC1Q5M775 1068 aa10.79□□□□□ -0.68
USP54-205ENST00000424265 SLFN13Q68D06 897 aa10.79□□□□□ -0.68
USP54-205ENST00000424265 TANGO6Q9C0B7 1094 aa10.79□□□□□ -0.68
USP54-205ENST00000424265 TDRD3Q9H7E2 651 aaKnown RBP10.79□□□□□ -0.68
USP54-205ENST00000424265 TRPC6Q9Y210 931 aa10.79□□□□□ -0.68
USP54-205ENST00000424265 TRIM75PA6NK02 468 aa10.79□□□□□ -0.68
USP54-205ENST00000424265 MYO1EQ12965 1108 aa10.79□□□□□ -0.68
USP54-205ENST00000424265 GORASP1Q9BQQ3 440 aa10.79□□□□□ -0.68
USP54-205ENST00000424265 MYOZ2Q9NPC6 264 aa10.79□□□□□ -0.68
USP54-205ENST00000424265 GMPSP49915 693 aaPredicted RBP10.79□□□□□ -0.68
USP54-205ENST00000424265 RASEFQ8IZ41 740 aa10.79□□□□□ -0.68
USP54-205ENST00000424265 GPC2Q8N158 579 aa10.79□□□□□ -0.68
USP54-205ENST00000424265 ANO10Q9NW15 660 aa10.79□□□□□ -0.68
USP54-205ENST00000424265 ZNF70Q9UC06 446 aaPredicted RBP10.79□□□□□ -0.68
USP54-205ENST00000424265 CBFA2T2O43439 604 aa10.79□□□□□ -0.68
USP54-205ENST00000424265 SMTNP53814 917 aa10.79□□□□□ -0.68
USP54-205ENST00000424265 APOA5Q6Q788 366 aa10.79□□□□□ -0.68
USP54-205ENST00000424265 MCF2L2Q86YR7 1114 aa10.79□□□□□ -0.68
USP54-205ENST00000424265 NEDD1Q8NHV4 660 aa10.79□□□□□ -0.68
USP54-205ENST00000424265 ARPC5LQ9BPX5 153 aa10.79□□□□□ -0.68
USP54-205ENST00000424265 PHACTR1Q9C0D0 580 aa10.79□□□□□ -0.68
USP54-205ENST00000424265 EHD4Q9H223 541 aa10.79□□□□□ -0.68
USP54-205ENST00000424265 VCXQ9H320 206 aa10.79□□□□□ -0.68
USP54-205ENST00000424265 ADARB2Q9NS39 739 aaKnown RBP10.79□□□□□ -0.68
USP54-205ENST00000424265 MRPL11Q9Y3B7 192 aaKnown RBP10.79□□□□□ -0.68
USP54-205ENST00000424265 TOGARAM1Q9Y4F4 1720 aa10.79□□□□□ -0.68
USP54-205ENST00000424265 FLT1P17948 1338 aa10.78□□□□□ -0.68
USP54-205ENST00000424265 KRT18P05783 430 aaKnown RBP10.78□□□□□ -0.68
USP54-205ENST00000424265 FERMT3Q86UX7 667 aa10.78□□□□□ -0.68
USP54-205ENST00000424265 MKL1Q969V6 931 aa10.78□□□□□ -0.68
USP54-205ENST00000424265 RASSF10A6NK89 507 aa10.78□□□□□ -0.68
USP54-205ENST00000424265 AP5Z1O43299 807 aa10.78□□□□□ -0.68
USP54-205ENST00000424265 N4BP1O75113 896 aaKnown RBP10.78□□□□□ -0.68
USP54-205ENST00000424265 CCDC15Q0P6D6 951 aa10.78□□□□□ -0.68
USP54-205ENST00000424265 ARID5BQ14865 1188 aa10.78□□□□□ -0.68
USP54-205ENST00000424265 LRRN4CLQ8ND94 238 aa10.78□□□□□ -0.68
USP54-205ENST00000424265 SLC40A1Q9NP59 571 aa10.78□□□□□ -0.68
USP54-205ENST00000424265 GPCPD1Q9NPB8 672 aa10.78□□□□□ -0.68
USP54-205ENST00000424265 NPM3O75607 178 aaKnown RBP10.78□□□□□ -0.68
USP54-205ENST00000424265 AMPD3Q01432 767 aa10.78□□□□□ -0.68
USP54-205ENST00000424265 TBC1D10BQ4KMP7 808 aaPredicted RBP10.78□□□□□ -0.68
USP54-205ENST00000424265 CDC42EP5Q6NZY7 148 aa10.78□□□□□ -0.68
USP54-205ENST00000424265 FAM83AQ86UY5 434 aa10.78□□□□□ -0.68
USP54-205ENST00000424265 C2orf69Q8N8R5 385 aa10.78□□□□□ -0.68
USP54-205ENST00000424265 CAGE1Q8TC20 777 aa10.78□□□□□ -0.68
USP54-205ENST00000424265 CALML4Q96GE6 196 aa10.78□□□□□ -0.68
USP54-205ENST00000424265 SYT1P21579 422 aa10.78□□□□□ -0.68
USP54-205ENST00000424265 ADCY7P51828 1080 aa10.78□□□□□ -0.68
USP54-205ENST00000424265 CUL4BQ13620 913 aa10.78□□□□□ -0.68
USP54-205ENST00000424265 KBTBD12Q3ZCT8 623 aa10.78□□□□□ -0.68
USP54-205ENST00000424265 FHDC1Q9C0D6 1143 aaPredicted RBP10.78□□□□□ -0.68
USP54-205ENST00000424265 NACA2Q9H009 215 aa10.78□□□□□ -0.68
USP54-205ENST00000424265 SLC5A4Q9NY91 659 aa10.78□□□□□ -0.68
USP54-205ENST00000424265 RABGAP1Q9Y3P9 1069 aa10.78□□□□□ -0.68
USP54-205ENST00000424265 LTBP3Q9NS15 1303 aa10.78□□□□□ -0.68
USP54-205ENST00000424265 PDIA3P30101 505 aaKnown RBP10.77□□□□□ -0.68
USP54-205ENST00000424265 PCK1P35558 622 aa10.77□□□□□ -0.68
USP54-205ENST00000424265 SCNN1BP51168 640 aa10.77□□□□□ -0.68
USP54-205ENST00000424265 PLCB4Q15147 1175 aa10.77□□□□□ -0.68
USP54-205ENST00000424265 ABCB6Q9NP58 842 aa10.77□□□□□ -0.68
USP54-205ENST00000424265 OSBPP22059 807 aa10.77□□□□□ -0.69
USP54-205ENST00000424265 CDC37Q16543 378 aaPredicted RBP10.77□□□□□ -0.69
USP54-205ENST00000424265 RAB11FIP4Q86YS3 637 aa10.77□□□□□ -0.69
USP54-205ENST00000424265 MB21D2Q8IYB1 491 aaPredicted RBP10.77□□□□□ -0.69
USP54-205ENST00000424265 DACT1Q9NYF0 836 aa10.77□□□□□ -0.69
USP54-205ENST00000424265 V9GY48 417 aaPredicted RBP10.77□□□□□ -0.69
USP54-205ENST00000424265 AK9Q5TCS8 1911 aa10.77□□□□□ -0.69
USP54-205ENST00000424265 FSBPO95073 299 aa10.77□□□□□ -0.69
USP54-205ENST00000424265 FOSP01100 380 aaPredicted RBP10.77□□□□□ -0.69
USP54-205ENST00000424265 VIL1P09327 827 aaKnown RBP10.77□□□□□ -0.69
USP54-205ENST00000424265 CPA1P15085 419 aa10.77□□□□□ -0.69
USP54-205ENST00000424265 DACT2Q5SW24 774 aa10.77□□□□□ -0.69
USP54-205ENST00000424265 USP17L5A8MUK1 530 aa10.77□□□□□ -0.69
USP54-205ENST00000424265 KLRF2D3W0D1 207 aa10.77□□□□□ -0.69
USP54-205ENST00000424265 GUCY1B3Q02153 619 aa10.77□□□□□ -0.69
USP54-205ENST00000424265 WLSQ5T9L3 541 aa10.77□□□□□ -0.69
USP54-205ENST00000424265 C16orf86Q6ZW13 317 aa10.77□□□□□ -0.69
USP54-205ENST00000424265 SGMS1Q86VZ5 419 aa10.77□□□□□ -0.69
USP54-205ENST00000424265 ATP11CQ8NB49 1132 aa10.77□□□□□ -0.69
USP54-205ENST00000424265 MAP3K14Q99558 947 aa10.77□□□□□ -0.69
USP54-205ENST00000424265 YIPF2Q9BWQ6 316 aa10.77□□□□□ -0.69
USP54-205ENST00000424265 VCX3BQ9H321 246 aa10.77□□□□□ -0.69
USP54-205ENST00000424265 ZNF408Q9H9D4 720 aa10.77□□□□□ -0.69
USP54-205ENST00000424265 VCX3AQ9NNX9 186 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms