RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 SNHG28P0DPA3 235 aa19.68■□□□□ 0.74
CHCHD3-202ENST00000423635 IL9P15248 144 aa19.68■□□□□ 0.74
CHCHD3-202ENST00000423635 KCNA5P22460 613 aa19.68■□□□□ 0.74
CHCHD3-202ENST00000423635 PUS10Q3MIT2 529 aaKnown RBP19.68■□□□□ 0.74
CHCHD3-202ENST00000423635 TRAF7Q6Q0C0 670 aa19.68■□□□□ 0.74
CHCHD3-202ENST00000423635 TTC14Q96N46 770 aa19.68■□□□□ 0.74
CHCHD3-202ENST00000423635 HDAC6Q9UBN7 1215 aa19.68■□□□□ 0.74
CHCHD3-202ENST00000423635 INSL6Q9Y581 213 aa19.68■□□□□ 0.74
CHCHD3-202ENST00000423635 ZNF543Q08ER8 600 aa19.67■□□□□ 0.74
CHCHD3-202ENST00000423635 PTK7Q13308 1070 aa19.67■□□□□ 0.74
CHCHD3-202ENST00000423635 LY6KQ17RY6 165 aa19.67■□□□□ 0.74
CHCHD3-202ENST00000423635 TRIM71Q2Q1W2 868 aaKnown RBP19.67■□□□□ 0.74
CHCHD3-202ENST00000423635 C20orf194Q5TEA3 1177 aa19.67■□□□□ 0.74
CHCHD3-202ENST00000423635 VPS53Q5VIR6 699 aa19.67■□□□□ 0.74
CHCHD3-202ENST00000423635 PTCRAQ6ISU1 281 aaPredicted RBP19.67■□□□□ 0.74
CHCHD3-202ENST00000423635 NEK9Q8TD19 979 aa19.67■□□□□ 0.74
CHCHD3-202ENST00000423635 POTEB3A0JP26 581 aa19.66■□□□□ 0.74
CHCHD3-202ENST00000423635 DGKDQ16760 1214 aa19.66■□□□□ 0.74
CHCHD3-202ENST00000423635 POTEBQ6S5H4 581 aa19.66■□□□□ 0.74
CHCHD3-202ENST00000423635 C7orf31Q8N865 590 aa19.66■□□□□ 0.74
CHCHD3-202ENST00000423635 EMID1Q96A84 441 aaPredicted RBP19.66■□□□□ 0.74
CHCHD3-202ENST00000423635 CTNNA3Q9UI47 895 aa19.66■□□□□ 0.74
CHCHD3-202ENST00000423635 SIP14410 1827 aa19.65■□□□□ 0.74
CHCHD3-202ENST00000423635 HAS3O00219 553 aa19.65■□□□□ 0.74
CHCHD3-202ENST00000423635 SSTR3P32745 418 aaPredicted RBP19.65■□□□□ 0.74
CHCHD3-202ENST00000423635 HTRA4P83105 476 aaPredicted RBP19.65■□□□□ 0.74
CHCHD3-202ENST00000423635 MKRN4PQ13434 485 aaPredicted RBP19.65■□□□□ 0.74
CHCHD3-202ENST00000423635 SEPT14Q6ZU15 432 aa19.65■□□□□ 0.74
CHCHD3-202ENST00000423635 FBXO22Q8NEZ5 403 aa19.65■□□□□ 0.74
CHCHD3-202ENST00000423635 MRPL38Q96DV4 380 aaKnown RBP19.65■□□□□ 0.74
CHCHD3-202ENST00000423635 IWS1Q96ST2 819 aa19.65■□□□□ 0.74
CHCHD3-202ENST00000423635 C17orf80Q9BSJ5 609 aa19.65■□□□□ 0.74
CHCHD3-202ENST00000423635 KATNAL1Q9BW62 490 aa19.65■□□□□ 0.74
CHCHD3-202ENST00000423635 KCNH6Q9H252 994 aa19.65■□□□□ 0.74
CHCHD3-202ENST00000423635 DDX41Q9UJV9 622 aaKnown RBP19.65■□□□□ 0.74
CHCHD3-202ENST00000423635 PSEN2P49810 448 aa19.64■□□□□ 0.73
CHCHD3-202ENST00000423635 MBTPS1Q14703 1052 aa19.64■□□□□ 0.73
CHCHD3-202ENST00000423635 STXBP2Q15833 593 aa19.64■□□□□ 0.73
CHCHD3-202ENST00000423635 ZNF618Q5T7W0 954 aa19.64■□□□□ 0.73
CHCHD3-202ENST00000423635 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.64■□□□□ 0.732e-8■■■■■ 44.9
CHCHD3-202ENST00000423635 SP7Q8TDD2 431 aaPredicted RBP19.64■□□□□ 0.73
CHCHD3-202ENST00000423635 SYTL5Q8TDW5 730 aaPredicted RBP19.64■□□□□ 0.73
CHCHD3-202ENST00000423635 NSUN6Q8TEA1 469 aaKnown RBP19.64■□□□□ 0.73
CHCHD3-202ENST00000423635 TBC1D5Q92609 795 aa19.64■□□□□ 0.73
CHCHD3-202ENST00000423635 TAAR1Q96RJ0 339 aa19.64■□□□□ 0.73
CHCHD3-202ENST00000423635 CRBNQ96SW2 442 aa19.64■□□□□ 0.73
CHCHD3-202ENST00000423635 TOMM22Q9NS69 142 aa19.64■□□□□ 0.73
CHCHD3-202ENST00000423635 LGR5O75473 907 aa19.63■□□□□ 0.73
CHCHD3-202ENST00000423635 F2P00734 622 aa19.63■□□□□ 0.73
CHCHD3-202ENST00000423635 FGAP02671 866 aa19.63■□□□□ 0.73
CHCHD3-202ENST00000423635 GPATCH4Q5T3I0 446 aaKnown RBP19.63■□□□□ 0.73
CHCHD3-202ENST00000423635 FAM117BQ6P1L5 589 aa19.63■□□□□ 0.73
CHCHD3-202ENST00000423635 CHST3Q7LGC8 479 aa19.63■□□□□ 0.73
CHCHD3-202ENST00000423635 OTUD7AQ8TE49 926 aaPredicted RBP19.63■□□□□ 0.73
CHCHD3-202ENST00000423635 WNT8BQ93098 351 aa19.63■□□□□ 0.73
CHCHD3-202ENST00000423635 RCAN3Q9UKA8 241 aa19.63■□□□□ 0.73
CHCHD3-202ENST00000423635 MRE11P49959 708 aa19.62■□□□□ 0.73
CHCHD3-202ENST00000423635 LAMC2Q13753 1193 aa19.62■□□□□ 0.73
CHCHD3-202ENST00000423635 MFSD10Q14728 455 aa19.62■□□□□ 0.73
CHCHD3-202ENST00000423635 COL19A1Q14993 1142 aa19.62■□□□□ 0.73
CHCHD3-202ENST00000423635 PTPROQ16827 1216 aa19.62■□□□□ 0.73
CHCHD3-202ENST00000423635 CSPP1Q1MSJ5 1256 aa19.62■□□□□ 0.73
CHCHD3-202ENST00000423635 KIAA0753Q2KHM9 967 aa19.62■□□□□ 0.73
CHCHD3-202ENST00000423635 USH1GQ495M9 461 aa19.62■□□□□ 0.73
CHCHD3-202ENST00000423635 RRP12Q5JTH9 1297 aaKnown RBP19.62■□□□□ 0.73
CHCHD3-202ENST00000423635 SAMD11Q96NU1 681 aa19.62■□□□□ 0.73
CHCHD3-202ENST00000423635 ALG1Q9BT22 464 aa19.62■□□□□ 0.73
CHCHD3-202ENST00000423635 HELLSQ9NRZ9 838 aa19.62■□□□□ 0.73
CHCHD3-202ENST00000423635 COL20A1Q9P218 1284 aa19.62■□□□□ 0.73
CHCHD3-202ENST00000423635 EMSYQ7Z589 1322 aa19.61■□□□□ 0.73
CHCHD3-202ENST00000423635 DCXO43602 365 aa19.61■□□□□ 0.73
CHCHD3-202ENST00000423635 EIF3JO75822 258 aaKnown RBP19.61■□□□□ 0.73
CHCHD3-202ENST00000423635 AMHP03971 560 aa19.61■□□□□ 0.73
CHCHD3-202ENST00000423635 HOXD8P13378 290 aaPredicted RBP19.61■□□□□ 0.73
CHCHD3-202ENST00000423635 EPC2Q52LR7 807 aa19.61■□□□□ 0.73
CHCHD3-202ENST00000423635 DBF4BQ8NFT6 615 aa19.61■□□□□ 0.73
CHCHD3-202ENST00000423635 PPTC7Q8NI37 304 aa19.61■□□□□ 0.73
CHCHD3-202ENST00000423635 UIMC1Q96RL1 719 aa19.61■□□□□ 0.73
CHCHD3-202ENST00000423635 RMDN3Q96TC7 470 aa19.61■□□□□ 0.73
CHCHD3-202ENST00000423635 PRKAG3Q9UGI9 489 aa19.61■□□□□ 0.73
CHCHD3-202ENST00000423635 ABCB11O95342 1321 aa19.6■□□□□ 0.73
CHCHD3-202ENST00000423635 C19orf67A6NJJ6 358 aa19.6■□□□□ 0.73
CHCHD3-202ENST00000423635 H3BNC9 293 aa19.6■□□□□ 0.73
CHCHD3-202ENST00000423635 PPFIA4O75335 1185 aa19.6■□□□□ 0.73
CHCHD3-202ENST00000423635 PCP11498 1178 aaKnown RBP19.6■□□□□ 0.73
CHCHD3-202ENST00000423635 MX1P20591 662 aa19.6■□□□□ 0.73
CHCHD3-202ENST00000423635 ZNF200P98182 395 aaPredicted RBP19.6■□□□□ 0.73
CHCHD3-202ENST00000423635 NHLH1Q02575 133 aa19.6■□□□□ 0.73
CHCHD3-202ENST00000423635 MCF2L2Q86YR7 1114 aa19.6■□□□□ 0.73
CHCHD3-202ENST00000423635 PABPC5Q96DU9 382 aaKnown RBP19.6■□□□□ 0.73
CHCHD3-202ENST00000423635 UBA5Q9GZZ9 404 aa19.6■□□□□ 0.73
CHCHD3-202ENST00000423635 KIAA1217Q5T5P2 1943 aa19.59■□□□□ 0.73
CHCHD3-202ENST00000423635 H3BQ06 376 aaPredicted RBP19.59■□□□□ 0.73
CHCHD3-202ENST00000423635 GOLGA8HP0CJ92 632 aa19.59■□□□□ 0.73
CHCHD3-202ENST00000423635 HIC1Q14526 733 aa19.59■□□□□ 0.73
CHCHD3-202ENST00000423635 TIGD5Q53EQ6 642 aa19.59■□□□□ 0.73
CHCHD3-202ENST00000423635 PLEKHG4Q58EX7 1191 aa19.59■□□□□ 0.73
CHCHD3-202ENST00000423635 MYOCDQ8IZQ8 938 aa19.59■□□□□ 0.73
CHCHD3-202ENST00000423635 BANK1Q8NDB2 785 aa19.59■□□□□ 0.73
CHCHD3-202ENST00000423635 EVI5LQ96CN4 794 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms