RNA–Protein interactions for RNA: ENST00000423327.2

SPC24-201, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

TSL 2

Gene SPC24, Length 840 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-201ENST00000423327 CALM2P0DP24 149 aa17.89■□□□□ 0.45
SPC24-201ENST00000423327 CALM3P0DP25 149 aa17.89■□□□□ 0.45
SPC24-201ENST00000423327 VSIG10LQ86VR7 867 aa17.89■□□□□ 0.45
SPC24-201ENST00000423327 FCHSD1Q86WN1 690 aa17.89■□□□□ 0.45
SPC24-201ENST00000423327 FANCBQ8NB91 859 aa17.89■□□□□ 0.45
SPC24-201ENST00000423327 AFG1LQ8WV93 481 aa17.89■□□□□ 0.45
SPC24-201ENST00000423327 LZTS2Q9BRK4 669 aa17.89■□□□□ 0.45
SPC24-201ENST00000423327 PPP1R12CQ9BZL4 782 aa17.89■□□□□ 0.45
SPC24-201ENST00000423327 ALDH8A1Q9H2A2 487 aaPredicted RBP17.89■□□□□ 0.45
SPC24-201ENST00000423327 POLR3EQ9NVU0 708 aa17.89■□□□□ 0.45
SPC24-201ENST00000423327 SNX14Q9Y5W7 946 aa17.89■□□□□ 0.45
SPC24-201ENST00000423327 MEIS2O14770 477 aa17.88■□□□□ 0.45
SPC24-201ENST00000423327 GH1P01241 217 aa17.88■□□□□ 0.45
SPC24-201ENST00000423327 MYCLP12524 364 aaPredicted RBP17.88■□□□□ 0.45
SPC24-201ENST00000423327 GNAQP50148 359 aa17.88■□□□□ 0.45
SPC24-201ENST00000423327 FPGSQ05932 587 aa17.88■□□□□ 0.45
SPC24-201ENST00000423327 FUT2Q10981 343 aa17.88■□□□□ 0.45
SPC24-201ENST00000423327 USP17L6PQ6QN14 398 aa17.88■□□□□ 0.45
SPC24-201ENST00000423327 Q7L0L9 218 aa17.88■□□□□ 0.45
SPC24-201ENST00000423327 C16orf59Q7L2K0 433 aa17.88■□□□□ 0.45
SPC24-201ENST00000423327 CCDC82Q8N4S0 544 aa17.88■□□□□ 0.45
SPC24-201ENST00000423327 MTG1Q9BT17 334 aaPredicted RBP17.88■□□□□ 0.45
SPC24-201ENST00000423327 FAM217BQ9NTX9 383 aaPredicted RBP17.88■□□□□ 0.45
SPC24-201ENST00000423327 DOCK5Q9H7D0 1870 aa17.88■□□□□ 0.45
SPC24-201ENST00000423327 TLR3O15455 904 aaKnown RBP17.87■□□□□ 0.45
SPC24-201ENST00000423327 CYP2C18P33260 490 aa17.87■□□□□ 0.45
SPC24-201ENST00000423327 MRPS9P82933 396 aaKnown RBP17.87■□□□□ 0.45
SPC24-201ENST00000423327 TRAF1Q13077 416 aa17.87■□□□□ 0.45
SPC24-201ENST00000423327 KRT32Q14532 448 aa17.87■□□□□ 0.45
SPC24-201ENST00000423327 NBPF20Q3BBV1 942 aa17.87■□□□□ 0.45
SPC24-201ENST00000423327 MFSD5Q6N075 450 aa17.87■□□□□ 0.45
SPC24-201ENST00000423327 GPR153Q6NV75 609 aa17.87■□□□□ 0.45
SPC24-201ENST00000423327 KAT2BQ92831 832 aa17.87■□□□□ 0.45
SPC24-201ENST00000423327 EMID1Q96A84 441 aaPredicted RBP17.87■□□□□ 0.45
SPC24-201ENST00000423327 NOC4LQ9BVI4 516 aaKnown RBP17.87■□□□□ 0.45
SPC24-201ENST00000423327 TRMT13Q9NUP7 481 aaKnown RBP17.87■□□□□ 0.45
SPC24-201ENST00000423327 MRVI1Q9Y6F6 885 aa17.87■□□□□ 0.45
SPC24-201ENST00000423327 CDH23Q9H251 3354 aa17.86■□□□□ 0.45
SPC24-201ENST00000423327 CSF2RAP15509 400 aa17.86■□□□□ 0.45
SPC24-201ENST00000423327 CDC27P30260 824 aa17.86■□□□□ 0.45
SPC24-201ENST00000423327 SP2Q02086 613 aa17.86■□□□□ 0.45
SPC24-201ENST00000423327 SEMA3FQ13275 785 aa17.86■□□□□ 0.45
SPC24-201ENST00000423327 TYW1BQ6NUM6 668 aa17.86■□□□□ 0.45
SPC24-201ENST00000423327 VWCEQ96DN2 955 aa17.86■□□□□ 0.45
SPC24-201ENST00000423327 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.86■□□□□ 0.451e-8■■■■□ 22.3
SPC24-201ENST00000423327 SEZ6LQ9BYH1 1024 aa17.86■□□□□ 0.45
SPC24-201ENST00000423327 WNT8AQ9H1J5 351 aa17.86■□□□□ 0.45
SPC24-201ENST00000423327 BCAS3Q9H6U6 928 aa17.86■□□□□ 0.45
SPC24-201ENST00000423327 SEC63Q9UGP8 760 aaKnown RBP17.86■□□□□ 0.45
SPC24-201ENST00000423327 KLF18A0A0U1RQI7 1052 aa17.85■□□□□ 0.45
SPC24-201ENST00000423327 PIK3CDO00329 1044 aa17.85■□□□□ 0.45
SPC24-201ENST00000423327 SORBS3O60504 671 aa17.85■□□□□ 0.45
SPC24-201ENST00000423327 UBA1P22314 1058 aaKnown RBP17.85■□□□□ 0.45
SPC24-201ENST00000423327 CCND2P30279 289 aa17.85■□□□□ 0.45
SPC24-201ENST00000423327 SCN5AQ14524 2016 aa17.85■□□□□ 0.45
SPC24-201ENST00000423327 JAKMIP1Q96N16 626 aaKnown RBP17.85■□□□□ 0.45
SPC24-201ENST00000423327 INPP4AQ96PE3 977 aaPredicted RBP17.85■□□□□ 0.45
SPC24-201ENST00000423327 CTAGE1Q96RT6 745 aa17.85■□□□□ 0.45
SPC24-201ENST00000423327 TANC1Q9C0D5 1861 aa17.85■□□□□ 0.45
SPC24-201ENST00000423327 HIPK3Q9H422 1215 aa17.85■□□□□ 0.45
SPC24-201ENST00000423327 PPP4R2Q9NY27 417 aa17.85■□□□□ 0.45
SPC24-201ENST00000423327 ZBTB43O43298 467 aa17.84■□□□□ 0.45
SPC24-201ENST00000423327 CYP2C9P11712 490 aa17.84■□□□□ 0.45
SPC24-201ENST00000423327 HOXD8P13378 290 aaPredicted RBP17.84■□□□□ 0.45
SPC24-201ENST00000423327 UBE2SQ16763 222 aa17.84■□□□□ 0.45
SPC24-201ENST00000423327 RTN1Q16799 776 aa17.84■□□□□ 0.45
SPC24-201ENST00000423327 BRDTQ58F21 947 aaPredicted RBP17.84■□□□□ 0.45
SPC24-201ENST00000423327 TMEM240Q5SV17 173 aa17.84■□□□□ 0.45
SPC24-201ENST00000423327 MYSM1Q5VVJ2 828 aa17.84■□□□□ 0.45
SPC24-201ENST00000423327 WWC2Q6AWC2 1192 aa17.84■□□□□ 0.45
SPC24-201ENST00000423327 PPTC7Q8NI37 304 aa17.84■□□□□ 0.45
SPC24-201ENST00000423327 COL6A3P12111 3177 aa17.83■□□□□ 0.45
SPC24-201ENST00000423327 NID2Q14112 1375 aa17.83■□□□□ 0.45
SPC24-201ENST00000423327 GOLGA8AA7E2F4 631 aa17.83■□□□□ 0.44
SPC24-201ENST00000423327 GOLGA8BA8MQT2 603 aa17.83■□□□□ 0.44
SPC24-201ENST00000423327 KPNA6O60684 536 aa17.83■□□□□ 0.44
SPC24-201ENST00000423327 GGPS1O95749 300 aa17.83■□□□□ 0.44
SPC24-201ENST00000423327 HMGB1P09429 215 aaKnown RBP17.83■□□□□ 0.44
SPC24-201ENST00000423327 ZNF286BP0CG31 522 aa17.83■□□□□ 0.44
SPC24-201ENST00000423327 ACRP10323 421 aa17.83■□□□□ 0.44
SPC24-201ENST00000423327 APOBRQ0VD83 1088 aa17.83■□□□□ 0.44
SPC24-201ENST00000423327 HSDL1Q3SXM5 330 aa17.83■□□□□ 0.44
SPC24-201ENST00000423327 CELF3Q5SZQ8 465 aaKnown RBP17.83■□□□□ 0.44
SPC24-201ENST00000423327 NFRKBQ6P4R8 1299 aa17.83■□□□□ 0.44
SPC24-201ENST00000423327 Q6ZUG5 572 aa17.83■□□□□ 0.44
SPC24-201ENST00000423327 DEFB123Q8N688 67 aa17.83■□□□□ 0.44
SPC24-201ENST00000423327 SMARCC2Q8TAQ2 1214 aa17.83■□□□□ 0.44
SPC24-201ENST00000423327 RNPC3Q96LT9 517 aaKnown RBP17.83■□□□□ 0.44
SPC24-201ENST00000423327 AGXT2Q9BYV1 514 aa17.83■□□□□ 0.44
SPC24-201ENST00000423327 RBM28Q9NW13 759 aaKnown RBP17.83■□□□□ 0.44
SPC24-201ENST00000423327 TELO2Q9Y4R8 837 aa17.83■□□□□ 0.44
SPC24-201ENST00000423327 RBAK-RBAKDNI3L0D1 243 aa17.82■□□□□ 0.44
SPC24-201ENST00000423327 REC8O95072 547 aa17.82■□□□□ 0.44
SPC24-201ENST00000423327 RPS6KB1P23443 525 aa17.82■□□□□ 0.44
SPC24-201ENST00000423327 ICAM3P32942 547 aa17.82■□□□□ 0.44
SPC24-201ENST00000423327 CCL23P55773 120 aa17.82■□□□□ 0.44
SPC24-201ENST00000423327 PPIGQ13427 754 aaKnown RBP eCLIP17.82■□□□□ 0.449e-8■■□□□ 13.8
SPC24-201ENST00000423327 FAM47CQ5HY64 1035 aa17.82■□□□□ 0.44
SPC24-201ENST00000423327 RASIP1Q5U651 963 aa17.82■□□□□ 0.44
SPC24-201ENST00000423327 FAM109BQ6ICB4 259 aaPredicted RBP17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms