RNA–Protein interactions for RNA: ENST00000423275.5

RAF1-203, Transcript of Raf-1 proto-oncogene, serine/threonine kinase, humanhuman

TSL 2

Gene RAF1, Length 2,354 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1-203ENST00000423275 CDK5RAP3Q96JB5 506 aa20.82■□□□□ 0.92
RAF1-203ENST00000423275 NUP58Q9BVL2 599 aa20.82■□□□□ 0.92
RAF1-203ENST00000423275 STK17AQ9UEE5 414 aa20.82■□□□□ 0.92
RAF1-203ENST00000423275 MYH4Q9Y623 1939 aa20.82■□□□□ 0.92
RAF1-203ENST00000423275 MYO3BQ8WXR4 1341 aa20.82■□□□□ 0.92
RAF1-203ENST00000423275 DDTLA6NHG4 134 aaPredicted RBP20.81■□□□□ 0.92
RAF1-203ENST00000423275 ZBTB5O15062 677 aa20.81■□□□□ 0.92
RAF1-203ENST00000423275 SRGAP2O75044 1071 aa20.81■□□□□ 0.92
RAF1-203ENST00000423275 HLA-DOAP06340 250 aa20.81■□□□□ 0.92
RAF1-203ENST00000423275 MMP10P09238 476 aa20.81■□□□□ 0.92
RAF1-203ENST00000423275 PDIA5Q14554 519 aa20.81■□□□□ 0.92
RAF1-203ENST00000423275 RETREG2Q8NC44 543 aa20.81■□□□□ 0.92
RAF1-203ENST00000423275 JAKMIP2Q96AA8 810 aa20.81■□□□□ 0.92
RAF1-203ENST00000423275 MTMR8Q96EF0 704 aa20.81■□□□□ 0.92
RAF1-203ENST00000423275 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.81■□□□□ 0.92
RAF1-203ENST00000423275 DDX25Q9UHL0 483 aaKnown RBP20.81■□□□□ 0.92
RAF1-203ENST00000423275 COL11A2P13942 1736 aaPredicted RBP20.81■□□□□ 0.92
RAF1-203ENST00000423275 KRT83P78385 493 aa20.81■□□□□ 0.92
RAF1-203ENST00000423275 CYP27A1Q02318 531 aa20.81■□□□□ 0.92
RAF1-203ENST00000423275 PPP4R3AQ6IN85 833 aa20.81■□□□□ 0.92
RAF1-203ENST00000423275 UNC13DQ70J99 1090 aa20.81■□□□□ 0.92
RAF1-203ENST00000423275 CUL5Q93034 780 aa20.81■□□□□ 0.92
RAF1-203ENST00000423275 ERGIC2Q96RQ1 377 aa20.81■□□□□ 0.92
RAF1-203ENST00000423275 PSTPIP2Q9H939 334 aa20.81■□□□□ 0.92
RAF1-203ENST00000423275 ZNHIT6Q9NWK9 470 aaKnown RBP20.81■□□□□ 0.92
RAF1-203ENST00000423275 NRXN2Q9P2S2 1712 aa20.81■□□□□ 0.92
RAF1-203ENST00000423275 DUSP10Q9Y6W6 482 aa20.81■□□□□ 0.92
RAF1-203ENST00000423275 MYH7BA7E2Y1 1941 aa20.8■□□□□ 0.92
RAF1-203ENST00000423275 GREB1LQ9C091 1923 aaPredicted RBP20.8■□□□□ 0.92
RAF1-203ENST00000423275 ALDH1B1P30837 517 aa20.8■□□□□ 0.92
RAF1-203ENST00000423275 CYLC1P35663 651 aaPredicted RBP20.8■□□□□ 0.92
RAF1-203ENST00000423275 PPP1R2P41236 205 aa20.8■□□□□ 0.92
RAF1-203ENST00000423275 GYS2P54840 703 aa20.8■□□□□ 0.92
RAF1-203ENST00000423275 COBLL1Q53SF7 1204 aa20.8■□□□□ 0.92
RAF1-203ENST00000423275 GPATCH4Q5T3I0 446 aaKnown RBP20.8■□□□□ 0.92
RAF1-203ENST00000423275 MSL1Q68DK7 614 aa20.8■□□□□ 0.92
RAF1-203ENST00000423275 PPP1R18Q6NYC8 613 aa20.8■□□□□ 0.92
RAF1-203ENST00000423275 USP17L15C9J2P7 530 aa20.8■□□□□ 0.92
RAF1-203ENST00000423275 USP17L13C9JLJ4 530 aa20.8■□□□□ 0.92
RAF1-203ENST00000423275 USP17L11C9JVI0 530 aa20.8■□□□□ 0.92
RAF1-203ENST00000423275 USP17L18D6R9N7 530 aa20.8■□□□□ 0.92
RAF1-203ENST00000423275 USP17L22D6RA61 530 aa20.8■□□□□ 0.92
RAF1-203ENST00000423275 USP17L17D6RBQ6 530 aa20.8■□□□□ 0.92
RAF1-203ENST00000423275 USP17L19D6RCP7 530 aa20.8■□□□□ 0.92
RAF1-203ENST00000423275 USP17L20D6RJB6 530 aa20.8■□□□□ 0.92
RAF1-203ENST00000423275 PLEKP08567 350 aaPredicted RBP20.8■□□□□ 0.92
RAF1-203ENST00000423275 IDEP14735 1019 aa20.8■□□□□ 0.92
RAF1-203ENST00000423275 USP17L24Q0WX57 530 aa20.8■□□□□ 0.92
RAF1-203ENST00000423275 TMEM119Q4V9L6 283 aa20.8■□□□□ 0.92
RAF1-203ENST00000423275 KRT79Q5XKE5 535 aa20.8■□□□□ 0.92
RAF1-203ENST00000423275 USP17L6PQ6QN14 398 aa20.8■□□□□ 0.92
RAF1-203ENST00000423275 DDX12PQ92771 950 aa20.8■□□□□ 0.92
RAF1-203ENST00000423275 ZNF622Q969S3 477 aaKnown RBP eCLIP20.8■□□□□ 0.92
RAF1-203ENST00000423275 L1RE1Q9UN81 338 aa20.8■□□□□ 0.92
RAF1-203ENST00000423275 PVALEFA0A1B0GWK0 134 aa20.79■□□□□ 0.92
RAF1-203ENST00000423275 EPHB6O15197 1021 aa20.79■□□□□ 0.92
RAF1-203ENST00000423275 EEF2P13639 858 aaKnown RBP20.79■□□□□ 0.92
RAF1-203ENST00000423275 ERCC3P19447 782 aa20.79■□□□□ 0.92
RAF1-203ENST00000423275 TUBB4BP68371 445 aa20.79■□□□□ 0.92
RAF1-203ENST00000423275 LRRC41Q15345 812 aa20.79■□□□□ 0.92
RAF1-203ENST00000423275 SH3BP5LQ7L8J4 393 aa20.79■□□□□ 0.92
RAF1-203ENST00000423275 AKT1S1Q96B36 256 aa20.79■□□□□ 0.92
RAF1-203ENST00000423275 RNF216Q9NWF9 866 aaPredicted RBP20.79■□□□□ 0.92
RAF1-203ENST00000423275 EIF3CLB5ME19 914 aaKnown RBP20.79■□□□□ 0.92
RAF1-203ENST00000423275 KRT86O43790 486 aa20.79■□□□□ 0.92
RAF1-203ENST00000423275 MRPL12P52815 198 aaKnown RBP20.79■□□□□ 0.92
RAF1-203ENST00000423275 FKBP15Q5T1M5 1219 aa20.79■□□□□ 0.92
RAF1-203ENST00000423275 MASTLQ96GX5 879 aa20.79■□□□□ 0.92
RAF1-203ENST00000423275 ZDHHC15Q96MV8 337 aa20.79■□□□□ 0.92
RAF1-203ENST00000423275 MMS19Q96T76 1030 aa20.79■□□□□ 0.92
RAF1-203ENST00000423275 EIF3CQ99613 913 aaKnown RBP20.79■□□□□ 0.92
RAF1-203ENST00000423275 RAB34Q9BZG1 259 aa20.79■□□□□ 0.92
RAF1-203ENST00000423275 FAM198AQ9UFP1 575 aa20.79■□□□□ 0.92
RAF1-203ENST00000423275 SAR1BQ9Y6B6 198 aa20.79■□□□□ 0.92
RAF1-203ENST00000423275 ZNF263O14978 683 aa20.78■□□□□ 0.92
RAF1-203ENST00000423275 ERLIN1O75477 346 aa20.78■□□□□ 0.92
RAF1-203ENST00000423275 QRICH1Q2TAL8 776 aa20.78■□□□□ 0.92
RAF1-203ENST00000423275 KRT26Q7Z3Y9 468 aa20.78■□□□□ 0.92
RAF1-203ENST00000423275 SIAH1Q8IUQ4 282 aa20.78■□□□□ 0.92
RAF1-203ENST00000423275 CCDC170Q8IYT3 715 aa20.78■□□□□ 0.92
RAF1-203ENST00000423275 CAPZA3Q96KX2 299 aa20.78■□□□□ 0.92
RAF1-203ENST00000423275 EHD4Q9H223 541 aa20.78■□□□□ 0.92
RAF1-203ENST00000423275 PDE11AQ9HCR9 933 aa20.78■□□□□ 0.92
RAF1-203ENST00000423275 ATF5Q9Y2D1 282 aaPredicted RBP20.78■□□□□ 0.92
RAF1-203ENST00000423275 C10orf71Q711Q0 1435 aa20.78■□□□□ 0.92
RAF1-203ENST00000423275 SIPA1L1O43166 1804 aa20.78■□□□□ 0.92
RAF1-203ENST00000423275 PDE6BP35913 854 aa20.78■□□□□ 0.92
RAF1-203ENST00000423275 FIGNQ5HY92 759 aa20.78■□□□□ 0.92
RAF1-203ENST00000423275 ZNF662Q6ZS27 426 aa20.78■□□□□ 0.92
RAF1-203ENST00000423275 HDXQ7Z353 690 aa20.78■□□□□ 0.92
RAF1-203ENST00000423275 GPIHBP1Q8IV16 184 aa20.78■□□□□ 0.92
RAF1-203ENST00000423275 FAM207AQ9NSI2 230 aaPredicted RBP20.78■□□□□ 0.92
RAF1-203ENST00000423275 ZNF219Q9P2Y4 722 aaPredicted RBP20.78■□□□□ 0.92
RAF1-203ENST00000423275 A0A1W2PQJ5 194 aa20.77■□□□□ 0.92
RAF1-203ENST00000423275 IPO7O95373 1038 aaKnown RBP20.77■□□□□ 0.92
RAF1-203ENST00000423275 SNAP25P60880 206 aa20.77■□□□□ 0.92
RAF1-203ENST00000423275 EHHADHQ08426 723 aa20.77■□□□□ 0.92
RAF1-203ENST00000423275 VWA3BQ502W6 1294 aa20.77■□□□□ 0.92
RAF1-203ENST00000423275 PAPD7Q5XG87 772 aaKnown RBP20.77■□□□□ 0.92
RAF1-203ENST00000423275 NDST4Q9H3R1 872 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms