RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 VPS37CA5D8V6 355 aaPredicted RBP19.39■□□□□ 0.69
COL7A1-202ENST00000422991 FAM205CA6NFA0 338 aa19.39■□□□□ 0.69
COL7A1-202ENST00000422991 MYCLP12524 364 aaPredicted RBP19.39■□□□□ 0.69
COL7A1-202ENST00000422991 U2AF2P26368 475 aaKnown RBP eCLIP19.39■□□□□ 0.69
COL7A1-202ENST00000422991 MRPS9P82933 396 aaKnown RBP19.39■□□□□ 0.69
COL7A1-202ENST00000422991 CACNB2Q08289 660 aaPredicted RBP19.39■□□□□ 0.69
COL7A1-202ENST00000422991 NONOQ15233 471 aaKnown RBP eCLIP19.39■□□□□ 0.69
COL7A1-202ENST00000422991 STXBP2Q15833 593 aa19.39■□□□□ 0.69
COL7A1-202ENST00000422991 EARS2Q5JPH6 523 aaKnown RBP19.39■□□□□ 0.69
COL7A1-202ENST00000422991 PIK3AP1Q6ZUJ8 805 aa19.39■□□□□ 0.69
COL7A1-202ENST00000422991 SH3TC2Q8TF17 1288 aa19.39■□□□□ 0.69
COL7A1-202ENST00000422991 NRBP1Q9UHY1 535 aa19.39■□□□□ 0.69
COL7A1-202ENST00000422991 CYP3A4P08684 503 aa19.38■□□□□ 0.69
COL7A1-202ENST00000422991 CYBAP13498 195 aa19.38■□□□□ 0.69
COL7A1-202ENST00000422991 PRKAR2AP13861 404 aaKnown RBP19.38■□□□□ 0.69
COL7A1-202ENST00000422991 NOSTRINQ8IVI9 506 aa19.38■□□□□ 0.69
COL7A1-202ENST00000422991 FBXO16Q8IX29 292 aaPredicted RBP19.38■□□□□ 0.69
COL7A1-202ENST00000422991 TBCKQ8TEA7 893 aa19.38■□□□□ 0.69
COL7A1-202ENST00000422991 ABHD16BQ9H3Z7 469 aa19.38■□□□□ 0.69
COL7A1-202ENST00000422991 VTA1Q9NP79 307 aa19.38■□□□□ 0.69
COL7A1-202ENST00000422991 CNPY2Q9Y2B0 182 aa19.38■□□□□ 0.69
COL7A1-202ENST00000422991 FRMPD3Q5JV73 1810 aa19.37■□□□□ 0.69
COL7A1-202ENST00000422991 STX6O43752 255 aa19.37■□□□□ 0.69
COL7A1-202ENST00000422991 EDIL3O43854 480 aa19.37■□□□□ 0.69
COL7A1-202ENST00000422991 EIF3JO75822 258 aaKnown RBP19.37■□□□□ 0.69
COL7A1-202ENST00000422991 STAM2O75886 525 aa19.37■□□□□ 0.69
COL7A1-202ENST00000422991 ZNF865P0CJ78 1059 aaPredicted RBP19.37■□□□□ 0.69
COL7A1-202ENST00000422991 ACVR2BQ13705 512 aa19.37■□□□□ 0.69
COL7A1-202ENST00000422991 GNL2Q13823 731 aaKnown RBP19.37■□□□□ 0.69
COL7A1-202ENST00000422991 INF2Q27J81 1249 aa19.37■□□□□ 0.69
COL7A1-202ENST00000422991 MCTP1Q6DN14 999 aa19.37■□□□□ 0.69
COL7A1-202ENST00000422991 TRPV1Q8NER1 839 aa19.37■□□□□ 0.69
COL7A1-202ENST00000422991 MTMR6Q9Y217 621 aa19.37■□□□□ 0.69
COL7A1-202ENST00000422991 MYH15Q9Y2K3 1946 aa19.37■□□□□ 0.69
COL7A1-202ENST00000422991 PRAMEF19Q5SWL8 479 aa19.36■□□□□ 0.69
COL7A1-202ENST00000422991 EEPD1Q7L9B9 569 aa19.36■□□□□ 0.69
COL7A1-202ENST00000422991 INPP4AQ96PE3 977 aaPredicted RBP19.36■□□□□ 0.69
COL7A1-202ENST00000422991 ZHX1Q9UKY1 873 aaPredicted RBP19.36■□□□□ 0.69
COL7A1-202ENST00000422991 UBIAD1Q9Y5Z9 338 aa19.36■□□□□ 0.69
COL7A1-202ENST00000422991 RGS20O76081 388 aa19.35■□□□□ 0.69
COL7A1-202ENST00000422991 PDIA4P13667 645 aaKnown RBP19.35■□□□□ 0.69
COL7A1-202ENST00000422991 USP11P51784 963 aa19.35■□□□□ 0.69
COL7A1-202ENST00000422991 TAPT1Q6NXT6 567 aa19.35■□□□□ 0.69
COL7A1-202ENST00000422991 NEK8Q86SG6 692 aa19.35■□□□□ 0.69
COL7A1-202ENST00000422991 ZNF333Q96JL9 665 aa19.35■□□□□ 0.69
COL7A1-202ENST00000422991 ZFP91Q96JP5 570 aaPredicted RBP19.35■□□□□ 0.69
COL7A1-202ENST00000422991 RBM47A0AV96 593 aaKnown RBP19.34■□□□□ 0.69
COL7A1-202ENST00000422991 ITGB5P18084 799 aa19.34■□□□□ 0.69
COL7A1-202ENST00000422991 CCND3P30281 292 aaPredicted RBP19.34■□□□□ 0.69
COL7A1-202ENST00000422991 CIITAP33076 1130 aa19.34■□□□□ 0.69
COL7A1-202ENST00000422991 GNPTABQ3T906 1256 aa19.34■□□□□ 0.69
COL7A1-202ENST00000422991 CEP55Q53EZ4 464 aa19.34■□□□□ 0.69
COL7A1-202ENST00000422991 MXRA8Q9BRK3 442 aa19.34■□□□□ 0.69
COL7A1-202ENST00000422991 PDGFCQ9NRA1 345 aa19.34■□□□□ 0.69
COL7A1-202ENST00000422991 RTEL1Q9NZ71 1219 aa19.34■□□□□ 0.69
COL7A1-202ENST00000422991 DAXXQ9UER7 740 aaPredicted RBP19.34■□□□□ 0.69
COL7A1-202ENST00000422991 IGLV3-22A0A075B6J6 115 aa19.33■□□□□ 0.68
COL7A1-202ENST00000422991 FAM86B1E9PN63 330 aa19.33■□□□□ 0.68
COL7A1-202ENST00000422991 FAM86B2P0C5J1 330 aa19.33■□□□□ 0.68
COL7A1-202ENST00000422991 DDIT3P35638 169 aa19.33■□□□□ 0.68
COL7A1-202ENST00000422991 RESTQ13127 1097 aa19.33■□□□□ 0.68
COL7A1-202ENST00000422991 PKP1Q13835 747 aa19.33■□□□□ 0.68
COL7A1-202ENST00000422991 CCDC144BQ3MJ40 725 aa19.33■□□□□ 0.68
COL7A1-202ENST00000422991 MOXD1Q6UVY6 613 aa19.33■□□□□ 0.68
COL7A1-202ENST00000422991 SEPT14Q6ZU15 432 aa19.33■□□□□ 0.68
COL7A1-202ENST00000422991 NIPA1Q7RTP0 329 aa19.33■□□□□ 0.68
COL7A1-202ENST00000422991 BRAPQ7Z569 592 aa19.33■□□□□ 0.68
COL7A1-202ENST00000422991 FERMT3Q86UX7 667 aa19.33■□□□□ 0.68
COL7A1-202ENST00000422991 CYP2W1Q8TAV3 490 aa19.33■□□□□ 0.68
COL7A1-202ENST00000422991 SCFD2Q8WU76 684 aa19.33■□□□□ 0.68
COL7A1-202ENST00000422991 GPRASP2Q96D09 838 aa19.33■□□□□ 0.68
COL7A1-202ENST00000422991 TNRC18O15417 2968 aaPredicted RBP19.33■□□□□ 0.68
COL7A1-202ENST00000422991 DOCK5Q9H7D0 1870 aa19.33■□□□□ 0.68
COL7A1-202ENST00000422991 CYP3A7-CYP3A51PA0A087WV96 503 aa19.32■□□□□ 0.68
COL7A1-202ENST00000422991 MEIS1O00470 390 aa19.32■□□□□ 0.68
COL7A1-202ENST00000422991 SEPT4O43236 478 aa19.32■□□□□ 0.68
COL7A1-202ENST00000422991 TDP2O95551 362 aa19.32■□□□□ 0.68
COL7A1-202ENST00000422991 CYP3A7P24462 503 aa19.32■□□□□ 0.68
COL7A1-202ENST00000422991 ICAM3P32942 547 aa19.32■□□□□ 0.68
COL7A1-202ENST00000422991 ZNF76P36508 570 aa19.32■□□□□ 0.68
COL7A1-202ENST00000422991 ADCYAP1R1P41586 468 aa19.32■□□□□ 0.68
COL7A1-202ENST00000422991 SEMA3FQ13275 785 aa19.32■□□□□ 0.68
COL7A1-202ENST00000422991 LETM2Q2VYF4 491 aa19.32■□□□□ 0.68
COL7A1-202ENST00000422991 NLRX1Q86UT6 975 aa19.32■□□□□ 0.68
COL7A1-202ENST00000422991 LENG9Q96B70 501 aa19.32■□□□□ 0.68
COL7A1-202ENST00000422991 MBOAT7Q96N66 472 aa19.32■□□□□ 0.68
COL7A1-202ENST00000422991 WDR11Q9BZH6 1224 aa19.32■□□□□ 0.68
COL7A1-202ENST00000422991 UNC93B1Q9H1C4 597 aa19.32■□□□□ 0.68
COL7A1-202ENST00000422991 HMX1Q9NP08 348 aaPredicted RBP19.32■□□□□ 0.68
COL7A1-202ENST00000422991 JADE2Q9NQC1 790 aa19.32■□□□□ 0.68
COL7A1-202ENST00000422991 BRCA2P51587 3418 aa19.31■□□□□ 0.68
COL7A1-202ENST00000422991 SPATA31C2B4DYI2 1134 aa19.31■□□□□ 0.68
COL7A1-202ENST00000422991 WNT7AO00755 349 aa19.31■□□□□ 0.68
COL7A1-202ENST00000422991 ADCY6O43306 1168 aa19.31■□□□□ 0.68
COL7A1-202ENST00000422991 FIBPO43427 364 aa19.31■□□□□ 0.68
COL7A1-202ENST00000422991 ARIH2O95376 493 aa19.31■□□□□ 0.68
COL7A1-202ENST00000422991 ZSCAN22P10073 491 aaPredicted RBP19.31■□□□□ 0.68
COL7A1-202ENST00000422991 CCL5P13501 91 aa19.31■□□□□ 0.68
COL7A1-202ENST00000422991 AKR1A1P14550 325 aa19.31■□□□□ 0.68
COL7A1-202ENST00000422991 GCFC2P16383 781 aaKnown RBP19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms