RNA–Protein interactions for RNA: ENST00000422468.1

TRIM43CP-201, Transcript of tripartite motif containing 43C, pseudogene, humanhuman

BASIC

Gene TRIM43CP, Length 1,028 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43CP-201ENST00000422468 NKRFO15226 690 aaKnown RBP eCLIP9.53□□□□□ -0.88
TRIM43CP-201ENST00000422468 PPP1R11O60927 126 aaPredicted RBP9.53□□□□□ -0.88
TRIM43CP-201ENST00000422468 PPP2R5BQ15173 497 aa9.53□□□□□ -0.88
TRIM43CP-201ENST00000422468 RALYLQ86SE5 291 aaKnown RBP9.53□□□□□ -0.88
TRIM43CP-201ENST00000422468 PLPP6Q8IY26 295 aa9.53□□□□□ -0.88
TRIM43CP-201ENST00000422468 STAG2Q8N3U4 1231 aa9.53□□□□□ -0.88
TRIM43CP-201ENST00000422468 TMEM199Q8N511 208 aa9.53□□□□□ -0.88
TRIM43CP-201ENST00000422468 OR6J1Q8NGC5 347 aa9.53□□□□□ -0.88
TRIM43CP-201ENST00000422468 SCFD2Q8WU76 684 aa9.53□□□□□ -0.88
TRIM43CP-201ENST00000422468 KCNB2Q92953 911 aa9.53□□□□□ -0.88
TRIM43CP-201ENST00000422468 TCEANC2Q96MN5 208 aa9.53□□□□□ -0.88
TRIM43CP-201ENST00000422468 VAT1LQ9HCJ6 419 aa9.53□□□□□ -0.88
TRIM43CP-201ENST00000422468 POLR3EQ9NVU0 708 aa9.53□□□□□ -0.88
TRIM43CP-201ENST00000422468 MAD2L2Q9UI95 211 aa9.53□□□□□ -0.88
TRIM43CP-201ENST00000422468 MRPL11Q9Y3B7 192 aaKnown RBP9.53□□□□□ -0.88
TRIM43CP-201ENST00000422468 SCN10AQ9Y5Y9 1956 aa9.53□□□□□ -0.88
TRIM43CP-201ENST00000422468 UNC80Q8N2C7 3258 aa9.53□□□□□ -0.88
TRIM43CP-201ENST00000422468 EYSQ5T1H1 3165 aa9.52□□□□□ -0.89
TRIM43CP-201ENST00000422468 ERICH2A1L162 156 aa9.52□□□□□ -0.89
TRIM43CP-201ENST00000422468 PALM3A6NDB9 673 aaPredicted RBP9.52□□□□□ -0.89
TRIM43CP-201ENST00000422468 OPLAHO14841 1288 aa9.52□□□□□ -0.89
TRIM43CP-201ENST00000422468 IFIT3O14879 490 aaKnown RBP9.52□□□□□ -0.89
TRIM43CP-201ENST00000422468 CYTH3O43739 400 aa9.52□□□□□ -0.89
TRIM43CP-201ENST00000422468 PSMC6P62333 389 aa9.52□□□□□ -0.89
TRIM43CP-201ENST00000422468 PURAQ00577 322 aaKnown RBP9.52□□□□□ -0.89
TRIM43CP-201ENST00000422468 PPIGQ13427 754 aaKnown RBP eCLIP9.52□□□□□ -0.89
TRIM43CP-201ENST00000422468 SART3Q15020 963 aaKnown RBP9.52□□□□□ -0.89
TRIM43CP-201ENST00000422468 BRDTQ58F21 947 aaPredicted RBP9.52□□□□□ -0.89
TRIM43CP-201ENST00000422468 ZNF697Q5TEC3 545 aa9.52□□□□□ -0.89
TRIM43CP-201ENST00000422468 CREB3L3Q68CJ9 461 aa9.52□□□□□ -0.89
TRIM43CP-201ENST00000422468 NCOA7Q8NI08 942 aa9.52□□□□□ -0.89
TRIM43CP-201ENST00000422468 SYTL5Q8TDW5 730 aaPredicted RBP9.52□□□□□ -0.89
TRIM43CP-201ENST00000422468 IGDCC4Q8TDY8 1250 aa9.52□□□□□ -0.89
TRIM43CP-201ENST00000422468 NSUN6Q8TEA1 469 aaKnown RBP9.52□□□□□ -0.89
TRIM43CP-201ENST00000422468 TBC1D5Q92609 795 aa9.52□□□□□ -0.89
TRIM43CP-201ENST00000422468 MTMR8Q96EF0 704 aa9.52□□□□□ -0.89
TRIM43CP-201ENST00000422468 IWS1Q96ST2 819 aa9.52□□□□□ -0.89
TRIM43CP-201ENST00000422468 AMNQ9BXJ7 453 aa9.52□□□□□ -0.89
TRIM43CP-201ENST00000422468 LRRC2Q9BYS8 371 aa9.52□□□□□ -0.89
TRIM43CP-201ENST00000422468 CDH23Q9H251 3354 aa9.51□□□□□ -0.89
TRIM43CP-201ENST00000422468 A6NJR5 290 aa9.51□□□□□ -0.89
TRIM43CP-201ENST00000422468 ZBTB5O15062 677 aa9.51□□□□□ -0.89
TRIM43CP-201ENST00000422468 KPNA6O60684 536 aa9.51□□□□□ -0.89
TRIM43CP-201ENST00000422468 MYL3P08590 195 aa9.51□□□□□ -0.89
TRIM43CP-201ENST00000422468 TXNP10599 105 aaKnown RBP9.51□□□□□ -0.89
TRIM43CP-201ENST00000422468 CSF2RAP15509 400 aa9.51□□□□□ -0.89
TRIM43CP-201ENST00000422468 CYP2C18P33260 490 aa9.51□□□□□ -0.89
TRIM43CP-201ENST00000422468 FOXK1P85037 733 aa9.51□□□□□ -0.89
TRIM43CP-201ENST00000422468 GHRHRQ02643 423 aa9.51□□□□□ -0.89
TRIM43CP-201ENST00000422468 TRAF1Q13077 416 aa9.51□□□□□ -0.89
TRIM43CP-201ENST00000422468 TTLL4Q14679 1199 aa9.51□□□□□ -0.89
TRIM43CP-201ENST00000422468 GRM4Q14833 912 aa9.51□□□□□ -0.89
TRIM43CP-201ENST00000422468 WTAPQ15007 396 aa9.51□□□□□ -0.89
TRIM43CP-201ENST00000422468 SMYD5Q6GMV2 418 aa9.51□□□□□ -0.89
TRIM43CP-201ENST00000422468 C16orf59Q7L2K0 433 aa9.51□□□□□ -0.89
TRIM43CP-201ENST00000422468 SLC17A8Q8NDX2 589 aa9.51□□□□□ -0.89
TRIM43CP-201ENST00000422468 FAM161BQ96MY7 647 aa9.51□□□□□ -0.89
TRIM43CP-201ENST00000422468 GUCD1Q96NT3 240 aa9.51□□□□□ -0.89
TRIM43CP-201ENST00000422468 TAAR1Q96RJ0 339 aa9.51□□□□□ -0.89
TRIM43CP-201ENST00000422468 RMDN3Q96TC7 470 aa9.51□□□□□ -0.89
TRIM43CP-201ENST00000422468 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.51□□□□□ -0.89
TRIM43CP-201ENST00000422468 MTG1Q9BT17 334 aaPredicted RBP9.51□□□□□ -0.89
TRIM43CP-201ENST00000422468 MYL10Q9BUA6 226 aa9.51□□□□□ -0.89
TRIM43CP-201ENST00000422468 NOC4LQ9BVI4 516 aaKnown RBP9.51□□□□□ -0.89
TRIM43CP-201ENST00000422468 PPP1R12CQ9BZL4 782 aa9.51□□□□□ -0.89
TRIM43CP-201ENST00000422468 TRPV6Q9H1D0 765 aa9.51□□□□□ -0.89
TRIM43CP-201ENST00000422468 ALDH8A1Q9H2A2 487 aaPredicted RBP9.51□□□□□ -0.89
TRIM43CP-201ENST00000422468 HIPK3Q9H422 1215 aa9.51□□□□□ -0.89
TRIM43CP-201ENST00000422468 COL20A1Q9P218 1284 aa9.51□□□□□ -0.89
TRIM43CP-201ENST00000422468 ADAMTS3O15072 1205 aa9.5□□□□□ -0.89
TRIM43CP-201ENST00000422468 B4GALT4O60513 344 aa9.5□□□□□ -0.89
TRIM43CP-201ENST00000422468 EIF5BO60841 1220 aaKnown RBP9.5□□□□□ -0.89
TRIM43CP-201ENST00000422468 DTNBO60941 627 aa9.5□□□□□ -0.89
TRIM43CP-201ENST00000422468 CDC45O75419 566 aa9.5□□□□□ -0.89
TRIM43CP-201ENST00000422468 EIF3JO75822 258 aaKnown RBP9.5□□□□□ -0.89
TRIM43CP-201ENST00000422468 ARIH2O95376 493 aa9.5□□□□□ -0.89
TRIM43CP-201ENST00000422468 CFBP00751 764 aa9.5□□□□□ -0.89
TRIM43CP-201ENST00000422468 HSD17B4P51659 736 aa9.5□□□□□ -0.89
TRIM43CP-201ENST00000422468 EXOSC10Q01780 885 aaKnown RBP9.5□□□□□ -0.89
TRIM43CP-201ENST00000422468 TROAPQ12815 778 aa9.5□□□□□ -0.89
TRIM43CP-201ENST00000422468 CAMK2BQ13554 666 aa9.5□□□□□ -0.89
TRIM43CP-201ENST00000422468 STXBP2Q15833 593 aa9.5□□□□□ -0.89
TRIM43CP-201ENST00000422468 TMEM67Q5HYA8 995 aa9.5□□□□□ -0.89
TRIM43CP-201ENST00000422468 TMEM240Q5SV17 173 aa9.5□□□□□ -0.89
TRIM43CP-201ENST00000422468 RASIP1Q5U651 963 aa9.5□□□□□ -0.89
TRIM43CP-201ENST00000422468 ARHGEF16Q5VV41 709 aa9.5□□□□□ -0.89
TRIM43CP-201ENST00000422468 CCDC62Q6P9F0 684 aa9.5□□□□□ -0.89
TRIM43CP-201ENST00000422468 PSRC1Q6PGN9 363 aaPredicted RBP9.5□□□□□ -0.89
TRIM43CP-201ENST00000422468 CATIPQ7Z7H3 387 aa9.5□□□□□ -0.89
TRIM43CP-201ENST00000422468 RAB11FIP4Q86YS3 637 aa9.5□□□□□ -0.89
TRIM43CP-201ENST00000422468 SAMD3Q8N6K7 520 aa9.5□□□□□ -0.89
TRIM43CP-201ENST00000422468 COPS5Q92905 334 aa9.5□□□□□ -0.89
TRIM43CP-201ENST00000422468 SEMA6BQ9H3T3 888 aa9.5□□□□□ -0.89
TRIM43CP-201ENST00000422468 RIOX1Q9H6W3 641 aa9.5□□□□□ -0.89
TRIM43CP-201ENST00000422468 LY9Q9HBG7 655 aa9.5□□□□□ -0.89
TRIM43CP-201ENST00000422468 IL23AQ9NPF7 189 aa9.5□□□□□ -0.89
TRIM43CP-201ENST00000422468 PXMP2Q9NR77 195 aa9.5□□□□□ -0.89
TRIM43CP-201ENST00000422468 MAP3K20Q9NYL2 800 aaKnown RBP9.5□□□□□ -0.89
TRIM43CP-201ENST00000422468 DAXXQ9UER7 740 aaPredicted RBP9.5□□□□□ -0.89
TRIM43CP-201ENST00000422468 PCDHA1Q9Y5I3 950 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms