RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 PPP1R16BQ96T49 567 aa10.78□□□□□ -0.68
CMSS1-201ENST00000421999 PRR12Q9ULL5 1215 aa10.78□□□□□ -0.68
CMSS1-201ENST00000421999 USP54Q70EL1 1684 aa10.78□□□□□ -0.68
CMSS1-201ENST00000421999 MEIS1O00470 390 aa10.78□□□□□ -0.68
CMSS1-201ENST00000421999 STX10O60499 249 aa10.78□□□□□ -0.68
CMSS1-201ENST00000421999 LPXNO60711 386 aa10.78□□□□□ -0.68
CMSS1-201ENST00000421999 AXDND1Q5T1B0 1012 aaPredicted RBP10.78□□□□□ -0.68
CMSS1-201ENST00000421999 LDHDQ86WU2 507 aa10.78□□□□□ -0.68
CMSS1-201ENST00000421999 ABI1Q8IZP0 508 aa10.78□□□□□ -0.68
CMSS1-201ENST00000421999 GPC2Q8N158 579 aa10.78□□□□□ -0.68
CMSS1-201ENST00000421999 MSANTD4Q8NCY6 345 aa10.78□□□□□ -0.68
CMSS1-201ENST00000421999 DPF2Q92785 391 aa10.78□□□□□ -0.68
CMSS1-201ENST00000421999 ZNF830Q96NB3 372 aaPredicted RBP10.78□□□□□ -0.68
CMSS1-201ENST00000421999 FAM49AQ9H0Q0 323 aaPredicted RBP10.78□□□□□ -0.68
CMSS1-201ENST00000421999 JADE2Q9NQC1 790 aa10.78□□□□□ -0.68
CMSS1-201ENST00000421999 NFE2L3Q9Y4A8 694 aa10.78□□□□□ -0.68
CMSS1-201ENST00000421999 SRPRBQ9Y5M8 271 aaKnown RBP10.78□□□□□ -0.68
CMSS1-201ENST00000421999 COL4A3BPQ9Y5P4 624 aa10.78□□□□□ -0.68
CMSS1-201ENST00000421999 AK9Q5TCS8 1911 aa10.78□□□□□ -0.68
CMSS1-201ENST00000421999 CNTNAP5Q8WYK1 1306 aa10.78□□□□□ -0.68
CMSS1-201ENST00000421999 CCL15-CCL14A0A0B4J2E2 113 aa10.78□□□□□ -0.68
CMSS1-201ENST00000421999 CTNND1O60716 968 aaKnown RBP10.78□□□□□ -0.68
CMSS1-201ENST00000421999 FCER1AP12319 257 aa10.78□□□□□ -0.68
CMSS1-201ENST00000421999 NLRP12P59046 1061 aa10.78□□□□□ -0.68
CMSS1-201ENST00000421999 NFX1Q12986 1120 aaKnown RBP10.78□□□□□ -0.68
CMSS1-201ENST00000421999 DMP1Q13316 513 aaPredicted RBP10.78□□□□□ -0.68
CMSS1-201ENST00000421999 COG2Q14746 738 aa10.78□□□□□ -0.68
CMSS1-201ENST00000421999 STXBP2Q15833 593 aa10.78□□□□□ -0.68
CMSS1-201ENST00000421999 CCL15Q16663 113 aa10.78□□□□□ -0.68
CMSS1-201ENST00000421999 MLKLQ8NB16 471 aa10.78□□□□□ -0.68
CMSS1-201ENST00000421999 FAM193BQ96PV7 902 aaPredicted RBP10.78□□□□□ -0.68
CMSS1-201ENST00000421999 EHD4Q9H223 541 aa10.78□□□□□ -0.68
CMSS1-201ENST00000421999 ANKFY1Q9P2R3 1169 aa10.78□□□□□ -0.68
CMSS1-201ENST00000421999 FZD1Q9UP38 647 aa10.78□□□□□ -0.68
CMSS1-201ENST00000421999 KLRG2A4D1S0 409 aaPredicted RBP10.77□□□□□ -0.68
CMSS1-201ENST00000421999 LAD1O00515 517 aa10.77□□□□□ -0.68
CMSS1-201ENST00000421999 ZEB2O60315 1214 aa10.77□□□□□ -0.68
CMSS1-201ENST00000421999 FKBP1AP62942 108 aaKnown RBP10.77□□□□□ -0.68
CMSS1-201ENST00000421999 SNAPC2Q13487 334 aa10.77□□□□□ -0.68
CMSS1-201ENST00000421999 SEPT7Q16181 437 aaKnown RBP10.77□□□□□ -0.68
CMSS1-201ENST00000421999 FAM83AQ86UY5 434 aa10.77□□□□□ -0.68
CMSS1-201ENST00000421999 RAET1EQ8TD07 263 aa10.77□□□□□ -0.68
CMSS1-201ENST00000421999 UBXN4Q92575 508 aa10.77□□□□□ -0.68
CMSS1-201ENST00000421999 CCDC127Q96BQ5 260 aa10.77□□□□□ -0.68
CMSS1-201ENST00000421999 JMJD4Q9H9V9 463 aa10.77□□□□□ -0.68
CMSS1-201ENST00000421999 MAD2L2Q9UI95 211 aa10.77□□□□□ -0.68
CMSS1-201ENST00000421999 GLI3P10071 1580 aa10.77□□□□□ -0.68
CMSS1-201ENST00000421999 KIF18AQ8NI77 898 aa10.77□□□□□ -0.69
CMSS1-201ENST00000421999 NSUN6Q8TEA1 469 aaKnown RBP10.77□□□□□ -0.69
CMSS1-201ENST00000421999 GJA10Q969M2 543 aa10.77□□□□□ -0.69
CMSS1-201ENST00000421999 AGXT2Q9BYV1 514 aa10.77□□□□□ -0.69
CMSS1-201ENST00000421999 PALM3A6NDB9 673 aaPredicted RBP10.77□□□□□ -0.69
CMSS1-201ENST00000421999 GNG11P61952 73 aa10.77□□□□□ -0.69
CMSS1-201ENST00000421999 FAM26FQ5R3K3 315 aa10.77□□□□□ -0.69
CMSS1-201ENST00000421999 MIS18BP1Q6P0N0 1132 aa10.77□□□□□ -0.69
CMSS1-201ENST00000421999 NBPF11Q86T75 865 aa10.77□□□□□ -0.69
CMSS1-201ENST00000421999 SESTD1Q86VW0 696 aa10.77□□□□□ -0.69
CMSS1-201ENST00000421999 RETREG2Q8NC44 543 aa10.77□□□□□ -0.69
CMSS1-201ENST00000421999 ZNF215Q9UL58 517 aaPredicted RBP10.77□□□□□ -0.69
CMSS1-201ENST00000421999 SYNRGQ9UMZ2 1314 aa10.77□□□□□ -0.69
CMSS1-201ENST00000421999 HNRNPDLO14979 420 aaKnown RBP10.77□□□□□ -0.69
CMSS1-201ENST00000421999 ARHGAP4P98171 946 aa10.77□□□□□ -0.69
CMSS1-201ENST00000421999 ZSCAN30Q86W11 494 aa10.77□□□□□ -0.69
CMSS1-201ENST00000421999 MYOCDQ8IZQ8 938 aa10.77□□□□□ -0.69
CMSS1-201ENST00000421999 JPH2Q9BR39 696 aaPredicted RBP10.77□□□□□ -0.69
CMSS1-201ENST00000421999 ACAD9Q9H845 621 aa10.77□□□□□ -0.69
CMSS1-201ENST00000421999 TMEM110-MUSTN1A8MSY1 372 aa10.76□□□□□ -0.69
CMSS1-201ENST00000421999 PRPF6O94906 941 aaKnown RBP10.76□□□□□ -0.69
CMSS1-201ENST00000421999 TDP2O95551 362 aa10.76□□□□□ -0.69
CMSS1-201ENST00000421999 PTPREP23469 700 aa10.76□□□□□ -0.69
CMSS1-201ENST00000421999 CACNB1Q02641 598 aaPredicted RBP10.76□□□□□ -0.69
CMSS1-201ENST00000421999 LONRF3Q496Y0 759 aa10.76□□□□□ -0.69
CMSS1-201ENST00000421999 GAS2L3Q86XJ1 694 aa10.76□□□□□ -0.69
CMSS1-201ENST00000421999 LPAR1Q92633 364 aa10.76□□□□□ -0.69
CMSS1-201ENST00000421999 FERMT1Q9BQL6 677 aa10.76□□□□□ -0.69
CMSS1-201ENST00000421999 PHF20Q9BVI0 1012 aa10.76□□□□□ -0.69
CMSS1-201ENST00000421999 SLC39A2Q9NP94 309 aa10.76□□□□□ -0.69
CMSS1-201ENST00000421999 NWD2Q9ULI1 1742 aa10.76□□□□□ -0.69
CMSS1-201ENST00000421999 MARF1Q9Y4F3 1742 aaKnown RBP10.76□□□□□ -0.69
CMSS1-201ENST00000421999 GOLGA6L10A6NI86 522 aa10.76□□□□□ -0.69
CMSS1-201ENST00000421999 KIF2AO00139 706 aaPredicted RBP10.76□□□□□ -0.69
CMSS1-201ENST00000421999 WDR46O15213 610 aaKnown RBP10.76□□□□□ -0.69
CMSS1-201ENST00000421999 IFI16Q16666 785 aaKnown RBP10.76□□□□□ -0.69
CMSS1-201ENST00000421999 HOOK3Q86VS8 718 aa10.76□□□□□ -0.69
CMSS1-201ENST00000421999 ZNF384Q8TF68 577 aa10.76□□□□□ -0.69
CMSS1-201ENST00000421999 PLVAPQ9BX97 442 aa10.76□□□□□ -0.69
CMSS1-201ENST00000421999 RRAGCQ9HB90 399 aa10.76□□□□□ -0.69
CMSS1-201ENST00000421999 ARFGEF2Q9Y6D5 1785 aa10.76□□□□□ -0.69
CMSS1-201ENST00000421999 SHTN1A0MZ66 631 aa10.76□□□□□ -0.69
CMSS1-201ENST00000421999 DLATP10515 647 aaKnown RBP10.76□□□□□ -0.69
CMSS1-201ENST00000421999 SKILP12757 684 aa10.76□□□□□ -0.69
CMSS1-201ENST00000421999 AP3B2Q13367 1082 aa10.76□□□□□ -0.69
CMSS1-201ENST00000421999 ARMCX5Q6P1M9 558 aa10.76□□□□□ -0.69
CMSS1-201ENST00000421999 RPS6KC1Q96S38 1066 aa10.76□□□□□ -0.69
CMSS1-201ENST00000421999 MRIQ9BWK5 157 aa10.76□□□□□ -0.69
CMSS1-201ENST00000421999 NACA2Q9H009 215 aa10.76□□□□□ -0.69
CMSS1-201ENST00000421999 PANK4Q9NVE7 773 aa10.76□□□□□ -0.69
CMSS1-201ENST00000421999 NUB1Q9Y5A7 615 aa10.76□□□□□ -0.69
CMSS1-201ENST00000421999 POTEMA6NI47 508 aa10.75□□□□□ -0.69
CMSS1-201ENST00000421999 CASQ1P31415 396 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms