RNA–Protein interactions for RNA: ENST00000421450.1

TNFAIP3-203, Transcript of TNF alpha induced protein 3, humanhuman

TSL 2

Gene TNFAIP3, Length 421 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-203ENST00000421450 RBM28Q9NW13 759 aaKnown RBP20.29■□□□□ 0.84
TNFAIP3-203ENST00000421450 KLF18A0A0U1RQI7 1052 aa20.28■□□□□ 0.84
TNFAIP3-203ENST00000421450 KPNA6O60684 536 aa20.28■□□□□ 0.84
TNFAIP3-203ENST00000421450 PURAQ00577 322 aaKnown RBP20.28■□□□□ 0.84
TNFAIP3-203ENST00000421450 RTN1Q16799 776 aa20.28■□□□□ 0.84
TNFAIP3-203ENST00000421450 LRIT3Q3SXY7 679 aa20.28■□□□□ 0.84
TNFAIP3-203ENST00000421450 FAM47CQ5HY64 1035 aa20.28■□□□□ 0.84
TNFAIP3-203ENST00000421450 CCDC62Q6P9F0 684 aa20.28■□□□□ 0.84
TNFAIP3-203ENST00000421450 BLOC1S2Q6QNY1 142 aa20.28■□□□□ 0.84
TNFAIP3-203ENST00000421450 ZFP91Q96JP5 570 aaPredicted RBP20.28■□□□□ 0.84
TNFAIP3-203ENST00000421450 BRPF3Q9ULD4 1205 aa20.28■□□□□ 0.84
TNFAIP3-203ENST00000421450 SNX14Q9Y5W7 946 aa20.28■□□□□ 0.84
TNFAIP3-203ENST00000421450 A6NJR5 290 aa20.27■□□□□ 0.84
TNFAIP3-203ENST00000421450 GOLGA8AA7E2F4 631 aa20.27■□□□□ 0.84
TNFAIP3-203ENST00000421450 GOLGA8BA8MQT2 603 aa20.27■□□□□ 0.84
TNFAIP3-203ENST00000421450 TIMP1P01033 207 aa20.27■□□□□ 0.84
TNFAIP3-203ENST00000421450 CPA1P15085 419 aa20.27■□□□□ 0.84
TNFAIP3-203ENST00000421450 VSIG10LQ86VR7 867 aa20.27■□□□□ 0.84
TNFAIP3-203ENST00000421450 DHX37Q8IY37 1157 aaKnown RBP20.27■□□□□ 0.84
TNFAIP3-203ENST00000421450 SLC43A3Q8NBI5 491 aa20.27■□□□□ 0.84
TNFAIP3-203ENST00000421450 AFG1LQ8WV93 481 aa20.27■□□□□ 0.84
TNFAIP3-203ENST00000421450 DDX41Q9UJV9 622 aaKnown RBP20.27■□□□□ 0.84
TNFAIP3-203ENST00000421450 TBX21Q9UL17 535 aa20.27■□□□□ 0.84
TNFAIP3-203ENST00000421450 GRIN2DO15399 1336 aa20.27■□□□□ 0.83
TNFAIP3-203ENST00000421450 PSMA5P28066 241 aa20.26■□□□□ 0.83
TNFAIP3-203ENST00000421450 SHHQ15465 462 aa20.26■□□□□ 0.83
TNFAIP3-203ENST00000421450 KCNV1Q6PIU1 500 aa20.26■□□□□ 0.83
TNFAIP3-203ENST00000421450 USP17L6PQ6QN14 398 aa20.26■□□□□ 0.83
TNFAIP3-203ENST00000421450 Q6ZUG5 572 aa20.26■□□□□ 0.83
TNFAIP3-203ENST00000421450 HEATR3Q7Z4Q2 680 aa20.26■□□□□ 0.83
TNFAIP3-203ENST00000421450 IL31RAQ8NI17 732 aa20.26■□□□□ 0.83
TNFAIP3-203ENST00000421450 RANBP2P49792 3224 aaKnown RBP20.25■□□□□ 0.83
TNFAIP3-203ENST00000421450 SORBS3O60504 671 aa20.25■□□□□ 0.83
TNFAIP3-203ENST00000421450 CD4P01730 458 aa20.25■□□□□ 0.83
TNFAIP3-203ENST00000421450 CASTP20810 708 aaKnown RBP20.25■□□□□ 0.83
TNFAIP3-203ENST00000421450 ARHGAP1Q07960 439 aa20.25■□□□□ 0.83
TNFAIP3-203ENST00000421450 LAMC2Q13753 1193 aa20.25■□□□□ 0.83
TNFAIP3-203ENST00000421450 NBPF20Q3BBV1 942 aa20.25■□□□□ 0.83
TNFAIP3-203ENST00000421450 C9orf50Q5SZB4 431 aa20.25■□□□□ 0.83
TNFAIP3-203ENST00000421450 MFSD5Q6N075 450 aa20.25■□□□□ 0.83
TNFAIP3-203ENST00000421450 TMEM199Q8N511 208 aa20.25■□□□□ 0.83
TNFAIP3-203ENST00000421450 KCNB2Q92953 911 aa20.25■□□□□ 0.83
TNFAIP3-203ENST00000421450 TRPV6Q9H1D0 765 aa20.25■□□□□ 0.83
TNFAIP3-203ENST00000421450 PSTPIP2Q9H939 334 aa20.25■□□□□ 0.83
TNFAIP3-203ENST00000421450 MYH7BA7E2Y1 1941 aa20.25■□□□□ 0.83
TNFAIP3-203ENST00000421450 B4GALT4O60513 344 aa20.24■□□□□ 0.83
TNFAIP3-203ENST00000421450 MMP3P08254 477 aa20.24■□□□□ 0.83
TNFAIP3-203ENST00000421450 APOBRQ0VD83 1088 aa20.24■□□□□ 0.83
TNFAIP3-203ENST00000421450 GNPTABQ3T906 1256 aa20.24■□□□□ 0.83
TNFAIP3-203ENST00000421450 GPKOWQ92917 476 aaPredicted RBP eCLIP20.24■□□□□ 0.83
TNFAIP3-203ENST00000421450 BRF1Q92994 677 aa20.24■□□□□ 0.83
TNFAIP3-203ENST00000421450 ALDH8A1Q9H2A2 487 aaPredicted RBP20.24■□□□□ 0.83
TNFAIP3-203ENST00000421450 HIPK3Q9H422 1215 aa20.24■□□□□ 0.83
TNFAIP3-203ENST00000421450 RGS20O76081 388 aa20.23■□□□□ 0.83
TNFAIP3-203ENST00000421450 SUPT20HL2P0C7V6 817 aa20.23■□□□□ 0.83
TNFAIP3-203ENST00000421450 CYP2C18P33260 490 aa20.23■□□□□ 0.83
TNFAIP3-203ENST00000421450 METAP2P50579 478 aaKnown RBP eCLIP20.23■□□□□ 0.83
TNFAIP3-203ENST00000421450 PPIGQ13427 754 aaKnown RBP eCLIP20.23■□□□□ 0.83
TNFAIP3-203ENST00000421450 DGKDQ16760 1214 aa20.23■□□□□ 0.83
TNFAIP3-203ENST00000421450 PPP1R13LQ8WUF5 828 aa20.23■□□□□ 0.83
TNFAIP3-203ENST00000421450 RNPC3Q96LT9 517 aaKnown RBP20.23■□□□□ 0.83
TNFAIP3-203ENST00000421450 MLXIPQ9HAP2 919 aa20.23■□□□□ 0.83
TNFAIP3-203ENST00000421450 RTEL1Q9NZ71 1219 aa20.23■□□□□ 0.83
TNFAIP3-203ENST00000421450 CNTNAP5Q8WYK1 1306 aa20.23■□□□□ 0.83
TNFAIP3-203ENST00000421450 PIK3CDO00329 1044 aa20.22■□□□□ 0.83
TNFAIP3-203ENST00000421450 MEIS2O14770 477 aa20.22■□□□□ 0.83
TNFAIP3-203ENST00000421450 GGPS1O95749 300 aa20.22■□□□□ 0.83
TNFAIP3-203ENST00000421450 TGFB3P10600 412 aa20.22■□□□□ 0.83
TNFAIP3-203ENST00000421450 RPS6KB1P23443 525 aa20.22■□□□□ 0.83
TNFAIP3-203ENST00000421450 NAPAP54920 295 aa20.22■□□□□ 0.83
TNFAIP3-203ENST00000421450 SPATA33Q96N06 139 aa20.22■□□□□ 0.83
TNFAIP3-203ENST00000421450 TRMT13Q9NUP7 481 aaKnown RBP20.22■□□□□ 0.83
TNFAIP3-203ENST00000421450 NOD1Q9Y239 953 aa20.22■□□□□ 0.83
TNFAIP3-203ENST00000421450 V9GY48 417 aaPredicted RBP20.22■□□□□ 0.83
TNFAIP3-203ENST00000421450 CCDC196A0A1B0GTZ2 297 aa20.21■□□□□ 0.83
TNFAIP3-203ENST00000421450 SPDYE3A6NKU9 549 aa20.21■□□□□ 0.83
TNFAIP3-203ENST00000421450 EPB41L2O43491 1005 aaKnown RBP20.21■□□□□ 0.83
TNFAIP3-203ENST00000421450 STAM2O75886 525 aa20.21■□□□□ 0.83
TNFAIP3-203ENST00000421450 CSF2RAP15509 400 aa20.21■□□□□ 0.83
TNFAIP3-203ENST00000421450 CDC27P30260 824 aa20.21■□□□□ 0.83
TNFAIP3-203ENST00000421450 RCAN1P53805 252 aa20.21■□□□□ 0.83
TNFAIP3-203ENST00000421450 EPHB4P54760 987 aa20.21■□□□□ 0.83
TNFAIP3-203ENST00000421450 UBE2SQ16763 222 aa20.21■□□□□ 0.83
TNFAIP3-203ENST00000421450 NFRKBQ6P4R8 1299 aa20.21■□□□□ 0.83
TNFAIP3-203ENST00000421450 EMID1Q96A84 441 aaPredicted RBP20.21■□□□□ 0.83
TNFAIP3-203ENST00000421450 CYP2C9P11712 490 aa20.2■□□□□ 0.82
TNFAIP3-203ENST00000421450 UBA1P22314 1058 aaKnown RBP20.2■□□□□ 0.82
TNFAIP3-203ENST00000421450 CCL23P55773 120 aa20.2■□□□□ 0.82
TNFAIP3-203ENST00000421450 MRPS9P82933 396 aaKnown RBP20.2■□□□□ 0.82
TNFAIP3-203ENST00000421450 CELF3Q5SZQ8 465 aaKnown RBP20.2■□□□□ 0.82
TNFAIP3-203ENST00000421450 MYSM1Q5VVJ2 828 aa20.2■□□□□ 0.82
TNFAIP3-203ENST00000421450 WWC2Q6AWC2 1192 aa20.2■□□□□ 0.82
TNFAIP3-203ENST00000421450 NLRX1Q86UT6 975 aa20.2■□□□□ 0.82
TNFAIP3-203ENST00000421450 PPTC7Q8NI37 304 aa20.2■□□□□ 0.82
TNFAIP3-203ENST00000421450 ALG1Q9BT22 464 aa20.2■□□□□ 0.82
TNFAIP3-203ENST00000421450 EHMT1Q9H9B1 1298 aa20.2■□□□□ 0.82
TNFAIP3-203ENST00000421450 SCN10AQ9Y5Y9 1956 aa20.2■□□□□ 0.82
TNFAIP3-203ENST00000421450 FRMPD4Q14CM0 1322 aa20.2■□□□□ 0.82
TNFAIP3-203ENST00000421450 ADD1P35611 737 aaKnown RBP20.19■□□□□ 0.82
TNFAIP3-203ENST00000421450 PTPN11Q06124 597 aaPredicted RBP20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms