RNA–Protein interactions for RNA: ENST00000420489.6

CNGA1-203, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene CNGA1, Length 2,746 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-203ENST00000420489 HDLBPQ00341 1268 aaKnown RBP4.93□□□□□ -1.62
CNGA1-203ENST00000420489 IER2Q9BTL4 223 aa4.93□□□□□ -1.62
CNGA1-203ENST00000420489 SUV39H2Q9H5I1 410 aa4.93□□□□□ -1.62
CNGA1-203ENST00000420489 FRRS1LQ9P0K9 344 aa4.93□□□□□ -1.62
CNGA1-203ENST00000420489 NCDNQ9UBB6 729 aa4.93□□□□□ -1.62
CNGA1-203ENST00000420489 XDHP47989 1333 aa4.93□□□□□ -1.62
CNGA1-203ENST00000420489 USP24Q9UPU5 2620 aa4.92□□□□□ -1.62
CNGA1-203ENST00000420489 TREHO43280 583 aa4.92□□□□□ -1.62
CNGA1-203ENST00000420489 TGM1P22735 817 aa4.92□□□□□ -1.62
CNGA1-203ENST00000420489 GATA4P43694 442 aa4.92□□□□□ -1.62
CNGA1-203ENST00000420489 NBPF12Q5TAG4 269 aaPredicted RBP4.92□□□□□ -1.62
CNGA1-203ENST00000420489 FAM43BQ6ZT52 329 aaPredicted RBP4.92□□□□□ -1.62
CNGA1-203ENST00000420489 PI4K2BQ8TCG2 481 aa4.92□□□□□ -1.62
CNGA1-203ENST00000420489 HSH2DQ96JZ2 352 aa4.92□□□□□ -1.62
CNGA1-203ENST00000420489 TGS1Q96RS0 853 aaKnown RBP4.92□□□□□ -1.62
CNGA1-203ENST00000420489 PTPRFP10586 1907 aa4.92□□□□□ -1.62
CNGA1-203ENST00000420489 CYBAP13498 195 aa4.92□□□□□ -1.62
CNGA1-203ENST00000420489 RFX1P22670 979 aa4.92□□□□□ -1.62
CNGA1-203ENST00000420489 CRTC2Q53ET0 693 aaPredicted RBP4.92□□□□□ -1.62
CNGA1-203ENST00000420489 SH3PXD2AQ5TCZ1 1133 aa4.92□□□□□ -1.62
CNGA1-203ENST00000420489 LAIR1Q6GTX8 287 aa4.92□□□□□ -1.62
CNGA1-203ENST00000420489 DTWD1Q8N5C7 304 aa4.92□□□□□ -1.62
CNGA1-203ENST00000420489 GSX2Q9BZM3 304 aa4.92□□□□□ -1.62
CNGA1-203ENST00000420489 C1QTNF9BB2RNN3 333 aa4.91□□□□□ -1.62
CNGA1-203ENST00000420489 SEPT4O43236 478 aa4.91□□□□□ -1.62
CNGA1-203ENST00000420489 FBLN1P23142 703 aa4.91□□□□□ -1.62
CNGA1-203ENST00000420489 GPSM2P81274 684 aa4.91□□□□□ -1.62
CNGA1-203ENST00000420489 NUP133Q8WUM0 1156 aa4.91□□□□□ -1.62
CNGA1-203ENST00000420489 JARID2Q92833 1246 aaPredicted RBP4.91□□□□□ -1.62
CNGA1-203ENST00000420489 BHMTQ93088 406 aa4.91□□□□□ -1.62
CNGA1-203ENST00000420489 SLC6A14Q9UN76 642 aa4.91□□□□□ -1.62
CNGA1-203ENST00000420489 SORCS3Q9UPU3 1222 aa4.91□□□□□ -1.62
CNGA1-203ENST00000420489 LOC100996750A0A140TA64 210 aa4.91□□□□□ -1.62
CNGA1-203ENST00000420489 A0A1B0GTL3 188 aa4.91□□□□□ -1.62
CNGA1-203ENST00000420489 M0R082 166 aa4.91□□□□□ -1.62
CNGA1-203ENST00000420489 ITGB2P05107 769 aa4.91□□□□□ -1.62
CNGA1-203ENST00000420489 HMGB1P09429 215 aaKnown RBP4.91□□□□□ -1.62
CNGA1-203ENST00000420489 CCND3P30281 292 aaPredicted RBP4.91□□□□□ -1.62
CNGA1-203ENST00000420489 CSRP3P50461 194 aa4.91□□□□□ -1.62
CNGA1-203ENST00000420489 NRG1Q02297 640 aaPredicted RBP4.91□□□□□ -1.62
CNGA1-203ENST00000420489 CSRP2Q16527 193 aa4.91□□□□□ -1.62
CNGA1-203ENST00000420489 MAML2Q8IZL2 1156 aaPredicted RBP4.91□□□□□ -1.62
CNGA1-203ENST00000420489 ZNF417Q8TAU3 575 aa4.91□□□□□ -1.62
CNGA1-203ENST00000420489 TRIM11Q96F44 468 aa4.91□□□□□ -1.62
CNGA1-203ENST00000420489 ZNF587Q96SQ5 575 aaPredicted RBP4.91□□□□□ -1.62
CNGA1-203ENST00000420489 LSM14BQ9BX40 385 aaKnown RBP4.91□□□□□ -1.62
CNGA1-203ENST00000420489 KRTAP4-6Q9BYQ5 205 aa4.91□□□□□ -1.62
CNGA1-203ENST00000420489 GMEB2Q9UKD1 530 aa4.91□□□□□ -1.62
CNGA1-203ENST00000420489 MTMR3Q13615 1198 aa4.9□□□□□ -1.62
CNGA1-203ENST00000420489 C20orf204Q6ZNR8 217 aa4.9□□□□□ -1.62
CNGA1-203ENST00000420489 ZDHHC14Q8IZN3 488 aa4.9□□□□□ -1.62
CNGA1-203ENST00000420489 ZNF280CQ8ND82 737 aa4.9□□□□□ -1.62
CNGA1-203ENST00000420489 DMGDHQ9UI17 866 aaKnown RBP4.9□□□□□ -1.62
CNGA1-203ENST00000420489 NOVA2Q9UNW9 492 aaKnown RBP4.9□□□□□ -1.62
CNGA1-203ENST00000420489 MSRB2Q9Y3D2 182 aa4.9□□□□□ -1.62
CNGA1-203ENST00000420489 NR2E1Q9Y466 385 aa4.9□□□□□ -1.62
CNGA1-203ENST00000420489 CHD6Q8TD26 2715 aa4.9□□□□□ -1.62
CNGA1-203ENST00000420489 DOCK1Q14185 1865 aa4.9□□□□□ -1.63
CNGA1-203ENST00000420489 RASA3Q14644 834 aa4.9□□□□□ -1.63
CNGA1-203ENST00000420489 RNF180Q86T96 592 aa4.9□□□□□ -1.63
CNGA1-203ENST00000420489 SLC43A3Q8NBI5 491 aa4.9□□□□□ -1.63
CNGA1-203ENST00000420489 MAP4K1Q92918 833 aa4.9□□□□□ -1.63
CNGA1-203ENST00000420489 MSLNLQ96KJ4 702 aa4.9□□□□□ -1.63
CNGA1-203ENST00000420489 SRA1Q9HD15 236 aaKnown RBP4.9□□□□□ -1.63
CNGA1-203ENST00000420489 SERPINA10Q9UK55 444 aa4.9□□□□□ -1.63
CNGA1-203ENST00000420489 STARD13Q9Y3M8 1113 aa4.9□□□□□ -1.63
CNGA1-203ENST00000420489 RWDD3Q9Y3V2 267 aa4.9□□□□□ -1.63
CNGA1-203ENST00000420489 EPOPA6NHQ4 379 aa4.89□□□□□ -1.63
CNGA1-203ENST00000420489 GRXCR1A8MXD5 290 aa4.89□□□□□ -1.63
CNGA1-203ENST00000420489 E9PAM4 449 aa4.89□□□□□ -1.63
CNGA1-203ENST00000420489 H0Y626 953 aa4.89□□□□□ -1.63
CNGA1-203ENST00000420489 MICAL2O94851 1124 aa4.89□□□□□ -1.63
CNGA1-203ENST00000420489 TRIM16O95361 564 aa4.89□□□□□ -1.63
CNGA1-203ENST00000420489 CD4P01730 458 aa4.89□□□□□ -1.63
CNGA1-203ENST00000420489 SP9P0CG40 484 aa4.89□□□□□ -1.63
CNGA1-203ENST00000420489 HOXD8P13378 290 aaPredicted RBP4.89□□□□□ -1.63
CNGA1-203ENST00000420489 IDH3AP50213 366 aa4.89□□□□□ -1.63
CNGA1-203ENST00000420489 PHLDB3Q6NSJ2 640 aa4.89□□□□□ -1.63
CNGA1-203ENST00000420489 RPAINQ86UA6 219 aa4.89□□□□□ -1.63
CNGA1-203ENST00000420489 CD163Q86VB7 1156 aa4.89□□□□□ -1.63
CNGA1-203ENST00000420489 PI4K2AQ9BTU6 479 aa4.89□□□□□ -1.63
CNGA1-203ENST00000420489 GINM1Q9NU53 330 aa4.89□□□□□ -1.63
CNGA1-203ENST00000420489 HCN2Q9UL51 889 aa4.89□□□□□ -1.63
CNGA1-203ENST00000420489 ATG7O95352 703 aa4.89□□□□□ -1.63
CNGA1-203ENST00000420489 NEFLP07196 543 aa4.89□□□□□ -1.63
CNGA1-203ENST00000420489 CENPBP07199 599 aaPredicted RBP4.89□□□□□ -1.63
CNGA1-203ENST00000420489 INPP5BP32019 993 aa4.89□□□□□ -1.63
CNGA1-203ENST00000420489 HERC6Q8IVU3 1022 aa4.89□□□□□ -1.63
CNGA1-203ENST00000420489 DNAJB12Q9NXW2 375 aaKnown RBP4.89□□□□□ -1.63
CNGA1-203ENST00000420489 TANC1Q9C0D5 1861 aa4.89□□□□□ -1.63
CNGA1-203ENST00000420489 RGS9O75916 674 aaPredicted RBP4.88□□□□□ -1.63
CNGA1-203ENST00000420489 CABYRO75952 493 aa4.88□□□□□ -1.63
CNGA1-203ENST00000420489 RB1P06400 928 aa4.88□□□□□ -1.63
CNGA1-203ENST00000420489 C1QTNF9P0C862 333 aa4.88□□□□□ -1.63
CNGA1-203ENST00000420489 NID1P14543 1247 aa4.88□□□□□ -1.63
CNGA1-203ENST00000420489 TBC1D8BQ0IIM8 1120 aa4.88□□□□□ -1.63
CNGA1-203ENST00000420489 PROSER1Q86XN7 944 aa4.88□□□□□ -1.63
CNGA1-203ENST00000420489 RBSNQ9H1K0 784 aa4.88□□□□□ -1.63
CNGA1-203ENST00000420489 A0A0U1RQG5 324 aaPredicted RBP4.88□□□□□ -1.63
CNGA1-203ENST00000420489 C1QL1O75973 258 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms