RNA–Protein interactions for RNA: ENST00000420401.5

ECHDC3-202, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 2

Gene ECHDC3, Length 854 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-202ENST00000420401 WDR11Q9BZH6 1224 aa20.93■□□□□ 0.94
ECHDC3-202ENST00000420401 AP5M1Q9H0R1 490 aa20.93■□□□□ 0.94
ECHDC3-202ENST00000420401 GNEQ9Y223 722 aaKnown RBP20.93■□□□□ 0.94
ECHDC3-202ENST00000420401 Q9Y3F1 56 aa20.93■□□□□ 0.94
ECHDC3-202ENST00000420401 LCTP09848 1927 aa20.93■□□□□ 0.94
ECHDC3-202ENST00000420401 C6orf222P0C671 652 aaPredicted RBP20.92■□□□□ 0.94
ECHDC3-202ENST00000420401 FOSL2P15408 326 aa20.92■□□□□ 0.94
ECHDC3-202ENST00000420401 NAPAP54920 295 aa20.92■□□□□ 0.94
ECHDC3-202ENST00000420401 SMAD3P84022 425 aaKnown RBP20.92■□□□□ 0.94
ECHDC3-202ENST00000420401 PFKFB3Q16875 520 aaPredicted RBP20.92■□□□□ 0.94
ECHDC3-202ENST00000420401 TRIM60Q495X7 471 aa20.92■□□□□ 0.94
ECHDC3-202ENST00000420401 DUSP28Q4G0W2 176 aa20.92■□□□□ 0.94
ECHDC3-202ENST00000420401 CPLX2Q6PUV4 134 aaKnown RBP20.92■□□□□ 0.94
ECHDC3-202ENST00000420401 TEX2Q8IWB9 1127 aa20.92■□□□□ 0.94
ECHDC3-202ENST00000420401 SYMPKQ92797 1274 aaKnown RBP20.92■□□□□ 0.94
ECHDC3-202ENST00000420401 PDCD2LQ9BRP1 358 aa20.92■□□□□ 0.94
ECHDC3-202ENST00000420401 UPF3AQ9H1J1 476 aaKnown RBP20.92■□□□□ 0.94
ECHDC3-202ENST00000420401 MCM3APO60318 1980 aa20.92■□□□□ 0.94
ECHDC3-202ENST00000420401 CPLX1O14810 134 aa20.91■□□□□ 0.94
ECHDC3-202ENST00000420401 MYCLP12524 364 aaPredicted RBP20.91■□□□□ 0.94
ECHDC3-202ENST00000420401 IFNAR1P17181 557 aa20.91■□□□□ 0.94
ECHDC3-202ENST00000420401 NEK4P51957 841 aa20.91■□□□□ 0.94
ECHDC3-202ENST00000420401 TTLL4Q14679 1199 aa20.91■□□□□ 0.94
ECHDC3-202ENST00000420401 PGM5Q15124 567 aa20.91■□□□□ 0.94
ECHDC3-202ENST00000420401 USP17L6PQ6QN14 398 aa20.91■□□□□ 0.94
ECHDC3-202ENST00000420401 TLK2Q86UE8 772 aa20.91■□□□□ 0.94
ECHDC3-202ENST00000420401 PCSK9Q8NBP7 692 aaKnown RBP20.91■□□□□ 0.94
ECHDC3-202ENST00000420401 KLHDC9Q8NEP7 349 aa20.91■□□□□ 0.94
ECHDC3-202ENST00000420401 PRUNE2Q8WUY3 3088 aa20.91■□□□□ 0.94
ECHDC3-202ENST00000420401 C22orf23Q9BZE7 217 aa20.91■□□□□ 0.94
ECHDC3-202ENST00000420401 GLT8D2Q9H1C3 349 aa20.91■□□□□ 0.94
ECHDC3-202ENST00000420401 UPF2Q9HAU5 1272 aaKnown RBP20.91■□□□□ 0.94
ECHDC3-202ENST00000420401 NCOA5Q9HCD5 579 aaKnown RBP20.91■□□□□ 0.94
ECHDC3-202ENST00000420401 PRDM6Q9NQX0 595 aa20.91■□□□□ 0.94
ECHDC3-202ENST00000420401 BARHL2Q9NY43 387 aa20.91■□□□□ 0.94
ECHDC3-202ENST00000420401 PHF24Q9UPV7 400 aa20.91■□□□□ 0.94
ECHDC3-202ENST00000420401 STXBP3O00186 592 aa20.9■□□□□ 0.94
ECHDC3-202ENST00000420401 MEIS2O14770 477 aa20.9■□□□□ 0.94
ECHDC3-202ENST00000420401 NKRFO15226 690 aaKnown RBP eCLIP20.9■□□□□ 0.94
ECHDC3-202ENST00000420401 DYNC1LI2O43237 492 aaPredicted RBP20.9■□□□□ 0.94
ECHDC3-202ENST00000420401 SCG2P13521 617 aa20.9■□□□□ 0.94
ECHDC3-202ENST00000420401 CST5P28325 142 aaPredicted RBP20.9■□□□□ 0.94
ECHDC3-202ENST00000420401 CCND2P30279 289 aa20.9■□□□□ 0.94
ECHDC3-202ENST00000420401 AK2P54819 239 aa20.9■□□□□ 0.94
ECHDC3-202ENST00000420401 NKX3-2P78367 333 aa20.9■□□□□ 0.94
ECHDC3-202ENST00000420401 STK3Q13188 491 aa20.9■□□□□ 0.94
ECHDC3-202ENST00000420401 NTRK3Q16288 839 aa20.9■□□□□ 0.94
ECHDC3-202ENST00000420401 GNASQ5JWF2 1037 aa20.9■□□□□ 0.94
ECHDC3-202ENST00000420401 SEPT14Q6ZU15 432 aa20.9■□□□□ 0.94
ECHDC3-202ENST00000420401 VSIG10LQ86VR7 867 aa20.9■□□□□ 0.94
ECHDC3-202ENST00000420401 TRIM22Q8IYM9 498 aa20.9■□□□□ 0.94
ECHDC3-202ENST00000420401 CCDC12Q8WUD4 166 aaPredicted RBP20.9■□□□□ 0.94
ECHDC3-202ENST00000420401 PHKBQ93100 1093 aa20.9■□□□□ 0.94
ECHDC3-202ENST00000420401 FERMT2Q96AC1 680 aa20.9■□□□□ 0.94
ECHDC3-202ENST00000420401 SLC26A6Q9BXS9 759 aa20.9■□□□□ 0.94
ECHDC3-202ENST00000420401 RNF26Q9BY78 433 aaPredicted RBP20.9■□□□□ 0.94
ECHDC3-202ENST00000420401 SLKQ9H2G2 1235 aaPredicted RBP20.9■□□□□ 0.94
ECHDC3-202ENST00000420401 PDLIM7Q9NR12 457 aa20.9■□□□□ 0.94
ECHDC3-202ENST00000420401 MOXD2PA6NHM9 499 aa20.89■□□□□ 0.93
ECHDC3-202ENST00000420401 ZEB2O60315 1214 aa20.89■□□□□ 0.93
ECHDC3-202ENST00000420401 TXNP10599 105 aaKnown RBP20.89■□□□□ 0.93
ECHDC3-202ENST00000420401 ADCY7P51828 1080 aa20.89■□□□□ 0.93
ECHDC3-202ENST00000420401 KCNA10Q16322 511 aa20.89■□□□□ 0.93
ECHDC3-202ENST00000420401 TTYH1Q9H313 450 aaPredicted RBP20.89■□□□□ 0.93
ECHDC3-202ENST00000420401 RIC8AQ9NPQ8 531 aa20.89■□□□□ 0.93
ECHDC3-202ENST00000420401 TPCN1Q9ULQ1 816 aa20.89■□□□□ 0.93
ECHDC3-202ENST00000420401 SMCO2A6NFE2 343 aa20.88■□□□□ 0.93
ECHDC3-202ENST00000420401 SPDYE3A6NKU9 549 aa20.88■□□□□ 0.93
ECHDC3-202ENST00000420401 STAM2O75886 525 aa20.88■□□□□ 0.93
ECHDC3-202ENST00000420401 CDKL5O76039 1030 aa20.88■□□□□ 0.93
ECHDC3-202ENST00000420401 ACLYP53396 1101 aa20.88■□□□□ 0.93
ECHDC3-202ENST00000420401 SSRP1Q08945 709 aaKnown RBP20.88■□□□□ 0.93
ECHDC3-202ENST00000420401 SNX17Q15036 470 aa20.88■□□□□ 0.93
ECHDC3-202ENST00000420401 FSCN1Q16658 493 aaKnown RBP20.88■□□□□ 0.93
ECHDC3-202ENST00000420401 KCNV1Q6PIU1 500 aa20.88■□□□□ 0.93
ECHDC3-202ENST00000420401 SH3RF1Q7Z6J0 888 aa20.88■□□□□ 0.93
ECHDC3-202ENST00000420401 LRRC37A2A6NM11 1700 aa20.87■□□□□ 0.93
ECHDC3-202ENST00000420401 FRMPD4Q14CM0 1322 aa20.87■□□□□ 0.93
ECHDC3-202ENST00000420401 TRIM43BA6NCK2 446 aa20.87■□□□□ 0.93
ECHDC3-202ENST00000420401 MYADML2A6NDP7 307 aa20.87■□□□□ 0.93
ECHDC3-202ENST00000420401 PFKFB2O60825 505 aa20.87■□□□□ 0.93
ECHDC3-202ENST00000420401 PKN1Q16512 942 aa20.87■□□□□ 0.93
ECHDC3-202ENST00000420401 BRDTQ58F21 947 aaPredicted RBP20.87■□□□□ 0.93
ECHDC3-202ENST00000420401 TMEM63BQ5T3F8 832 aa20.87■□□□□ 0.93
ECHDC3-202ENST00000420401 CCSAPQ6IQ19 270 aaPredicted RBP20.87■□□□□ 0.93
ECHDC3-202ENST00000420401 TYW1BQ6NUM6 668 aa20.87■□□□□ 0.93
ECHDC3-202ENST00000420401 XRRA1Q6P2D8 792 aa20.87■□□□□ 0.93
ECHDC3-202ENST00000420401 OR6J1Q8NGC5 347 aa20.87■□□□□ 0.93
ECHDC3-202ENST00000420401 TRIM43Q96BQ3 446 aaPredicted RBP20.87■□□□□ 0.93
ECHDC3-202ENST00000420401 RNPC3Q96LT9 517 aaKnown RBP20.87■□□□□ 0.93
ECHDC3-202ENST00000420401 EHMT1Q9H9B1 1298 aa20.87■□□□□ 0.93
ECHDC3-202ENST00000420401 SPTBN5Q9NRC6 3674 aaKnown RBP20.86■□□□□ 0.93
ECHDC3-202ENST00000420401 A0A1W2PQ45 241 aaPredicted RBP20.86■□□□□ 0.93
ECHDC3-202ENST00000420401 A0A1W2PQY0 241 aa20.86■□□□□ 0.93
ECHDC3-202ENST00000420401 CTAGE5O15320 804 aa20.86■□□□□ 0.93
ECHDC3-202ENST00000420401 ASGR1P07306 291 aa20.86■□□□□ 0.93
ECHDC3-202ENST00000420401 RBM25P49756 843 aaKnown RBP20.86■□□□□ 0.93
ECHDC3-202ENST00000420401 CPT1AP50416 773 aa20.86■□□□□ 0.93
ECHDC3-202ENST00000420401 TLE2Q04725 743 aa20.86■□□□□ 0.93
ECHDC3-202ENST00000420401 UBE2SQ16763 222 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms