RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 TOP1P11387 765 aaKnown RBP12.02□□□□□ -0.49
TNFAIP3-202ENST00000420009 SELPP16109 830 aa12.02□□□□□ -0.49
TNFAIP3-202ENST00000420009 PTGISQ16647 500 aa12.02□□□□□ -0.49
TNFAIP3-202ENST00000420009 VPS53Q5VIR6 699 aa12.02□□□□□ -0.49
TNFAIP3-202ENST00000420009 GDF6Q6KF10 455 aaPredicted RBP12.02□□□□□ -0.49
TNFAIP3-202ENST00000420009 CCDC62Q6P9F0 684 aa12.02□□□□□ -0.49
TNFAIP3-202ENST00000420009 CNKSR3Q6P9H4 555 aa12.02□□□□□ -0.49
TNFAIP3-202ENST00000420009 LRRC8DQ7L1W4 858 aa12.02□□□□□ -0.49
TNFAIP3-202ENST00000420009 TMCO2Q7Z6W1 182 aaPredicted RBP12.02□□□□□ -0.49
TNFAIP3-202ENST00000420009 MPHOSPH6Q99547 160 aaKnown RBP12.02□□□□□ -0.49
TNFAIP3-202ENST00000420009 TMEM47Q9BQJ4 181 aa12.02□□□□□ -0.49
TNFAIP3-202ENST00000420009 PIEZO1Q92508 2521 aa12.02□□□□□ -0.49
TNFAIP3-202ENST00000420009 NBNO60934 754 aa12.01□□□□□ -0.49
TNFAIP3-202ENST00000420009 GJB5O95377 273 aa12.01□□□□□ -0.49
TNFAIP3-202ENST00000420009 PARNO95453 639 aaKnown RBP12.01□□□□□ -0.49
TNFAIP3-202ENST00000420009 MMP3P08254 477 aa12.01□□□□□ -0.49
TNFAIP3-202ENST00000420009 SNHG28P0DPA3 235 aa12.01□□□□□ -0.49
TNFAIP3-202ENST00000420009 ERVK-21P61565 698 aa12.01□□□□□ -0.49
TNFAIP3-202ENST00000420009 ARHGAP1Q07960 439 aa12.01□□□□□ -0.49
TNFAIP3-202ENST00000420009 ZNF543Q08ER8 600 aa12.01□□□□□ -0.49
TNFAIP3-202ENST00000420009 TCTN1Q2MV58 587 aa12.01□□□□□ -0.49
TNFAIP3-202ENST00000420009 OTUD7AQ8TE49 926 aaPredicted RBP12.01□□□□□ -0.49
TNFAIP3-202ENST00000420009 AFG1LQ8WV93 481 aa12.01□□□□□ -0.49
TNFAIP3-202ENST00000420009 KAT2BQ92831 832 aa12.01□□□□□ -0.49
TNFAIP3-202ENST00000420009 UBE2ZQ9H832 354 aaPredicted RBP12.01□□□□□ -0.49
TNFAIP3-202ENST00000420009 SUGCTQ9HAC7 445 aa12.01□□□□□ -0.49
TNFAIP3-202ENST00000420009 GPCPD1Q9NPB8 672 aa12.01□□□□□ -0.49
TNFAIP3-202ENST00000420009 TCP11L1Q9NUJ3 509 aa12.01□□□□□ -0.49
TNFAIP3-202ENST00000420009 RCAN3Q9UKA8 241 aa12.01□□□□□ -0.49
TNFAIP3-202ENST00000420009 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12□□□□□ -0.49
TNFAIP3-202ENST00000420009 ABHD14A-ACY1A0A1B0GW23 586 aa12□□□□□ -0.49
TNFAIP3-202ENST00000420009 LINC01553A4QN01 128 aa12□□□□□ -0.49
TNFAIP3-202ENST00000420009 SEC24BO95487 1268 aa12□□□□□ -0.49
TNFAIP3-202ENST00000420009 ALX1Q15699 326 aa12□□□□□ -0.49
TNFAIP3-202ENST00000420009 LEXMQ3ZCV2 418 aa12□□□□□ -0.49
TNFAIP3-202ENST00000420009 TRAF7Q6Q0C0 670 aa12□□□□□ -0.49
TNFAIP3-202ENST00000420009 RGS22Q8NE09 1264 aa12□□□□□ -0.49
TNFAIP3-202ENST00000420009 TGS1Q96RS0 853 aaKnown RBP12□□□□□ -0.49
TNFAIP3-202ENST00000420009 RAD9AQ99638 391 aa12□□□□□ -0.49
TNFAIP3-202ENST00000420009 ZBED2Q9BTP6 218 aa12□□□□□ -0.49
TNFAIP3-202ENST00000420009 GTF2IRD1Q9UHL9 959 aa12□□□□□ -0.49
TNFAIP3-202ENST00000420009 MUC6Q6W4X9 2439 aa12□□□□□ -0.49
TNFAIP3-202ENST00000420009 SIP14410 1827 aa12□□□□□ -0.49
TNFAIP3-202ENST00000420009 PRR33A8MZF0 331 aa11.99□□□□□ -0.49
TNFAIP3-202ENST00000420009 B4DLN1 442 aa11.99□□□□□ -0.49
TNFAIP3-202ENST00000420009 EFCAB14O75071 495 aa11.99□□□□□ -0.49
TNFAIP3-202ENST00000420009 GH1P01241 217 aa11.99□□□□□ -0.49
TNFAIP3-202ENST00000420009 CKBP12277 381 aa11.99□□□□□ -0.49
TNFAIP3-202ENST00000420009 MRPL12P52815 198 aaKnown RBP11.99□□□□□ -0.49
TNFAIP3-202ENST00000420009 CHMP4BP1P59074 171 aa11.99□□□□□ -0.49
TNFAIP3-202ENST00000420009 FAM178BQ8IXR5 827 aa11.99□□□□□ -0.49
TNFAIP3-202ENST00000420009 MIER1Q8N108 512 aa11.99□□□□□ -0.49
TNFAIP3-202ENST00000420009 MAF1Q9H063 256 aa11.99□□□□□ -0.49
TNFAIP3-202ENST00000420009 MTUS1Q9ULD2 1270 aa11.99□□□□□ -0.49
TNFAIP3-202ENST00000420009 SALL3Q9BXA9 1300 aa11.99□□□□□ -0.49
TNFAIP3-202ENST00000420009 ZMYM6O95789 1325 aa11.98□□□□□ -0.49
TNFAIP3-202ENST00000420009 F2P00734 622 aa11.98□□□□□ -0.49
TNFAIP3-202ENST00000420009 MX1P20591 662 aa11.98□□□□□ -0.49
TNFAIP3-202ENST00000420009 MBTPS1Q14703 1052 aa11.98□□□□□ -0.49
TNFAIP3-202ENST00000420009 LY6KQ17RY6 165 aa11.98□□□□□ -0.49
TNFAIP3-202ENST00000420009 TRIM71Q2Q1W2 868 aaKnown RBP11.98□□□□□ -0.49
TNFAIP3-202ENST00000420009 GJD3Q8N144 294 aa11.98□□□□□ -0.49
TNFAIP3-202ENST00000420009 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.98□□□□□ -0.49
TNFAIP3-202ENST00000420009 EMID1Q96A84 441 aaPredicted RBP11.98□□□□□ -0.49
TNFAIP3-202ENST00000420009 HDAC6Q9UBN7 1215 aa11.98□□□□□ -0.49
TNFAIP3-202ENST00000420009 TRIP12Q14669 1992 aaPredicted RBP11.98□□□□□ -0.49
TNFAIP3-202ENST00000420009 COL4A6Q14031 1691 aa11.97□□□□□ -0.49
TNFAIP3-202ENST00000420009 HAS3O00219 553 aa11.97□□□□□ -0.49
TNFAIP3-202ENST00000420009 FGAP02671 866 aa11.97□□□□□ -0.49
TNFAIP3-202ENST00000420009 CASTP20810 708 aaKnown RBP11.97□□□□□ -0.49
TNFAIP3-202ENST00000420009 KCNA5P22460 613 aa11.97□□□□□ -0.49
TNFAIP3-202ENST00000420009 PTK7Q13308 1070 aa11.97□□□□□ -0.49
TNFAIP3-202ENST00000420009 DGKDQ16760 1214 aa11.97□□□□□ -0.49
TNFAIP3-202ENST00000420009 USH1GQ495M9 461 aa11.97□□□□□ -0.49
TNFAIP3-202ENST00000420009 RRP12Q5JTH9 1297 aaKnown RBP11.97□□□□□ -0.49
TNFAIP3-202ENST00000420009 GPATCH4Q5T3I0 446 aaKnown RBP11.97□□□□□ -0.49
TNFAIP3-202ENST00000420009 SYTL5Q8TDW5 730 aaPredicted RBP11.97□□□□□ -0.49
TNFAIP3-202ENST00000420009 WNT8BQ93098 351 aa11.97□□□□□ -0.49
TNFAIP3-202ENST00000420009 TTC14Q96N46 770 aa11.97□□□□□ -0.49
TNFAIP3-202ENST00000420009 TOMM22Q9NS69 142 aa11.97□□□□□ -0.49
TNFAIP3-202ENST00000420009 COL20A1Q9P218 1284 aa11.97□□□□□ -0.49
TNFAIP3-202ENST00000420009 RBAK-RBAKDNI3L0D1 243 aa11.96□□□□□ -0.49
TNFAIP3-202ENST00000420009 PCP11498 1178 aaKnown RBP11.96□□□□□ -0.49
TNFAIP3-202ENST00000420009 HOXD8P13378 290 aaPredicted RBP11.96□□□□□ -0.49
TNFAIP3-202ENST00000420009 IL9P15248 144 aa11.96□□□□□ -0.49
TNFAIP3-202ENST00000420009 PSEN2P49810 448 aa11.96□□□□□ -0.49
TNFAIP3-202ENST00000420009 HTRA4P83105 476 aaPredicted RBP11.96□□□□□ -0.49
TNFAIP3-202ENST00000420009 IKBKEQ14164 716 aa11.96□□□□□ -0.49
TNFAIP3-202ENST00000420009 ZNF618Q5T7W0 954 aa11.96□□□□□ -0.49
TNFAIP3-202ENST00000420009 SEPT14Q6ZU15 432 aa11.96□□□□□ -0.49
TNFAIP3-202ENST00000420009 C7orf31Q8N865 590 aa11.96□□□□□ -0.49
TNFAIP3-202ENST00000420009 PPTC7Q8NI37 304 aa11.96□□□□□ -0.49
TNFAIP3-202ENST00000420009 NEK9Q8TD19 979 aa11.96□□□□□ -0.49
TNFAIP3-202ENST00000420009 NSUN6Q8TEA1 469 aaKnown RBP11.96□□□□□ -0.49
TNFAIP3-202ENST00000420009 TBC1D5Q92609 795 aa11.96□□□□□ -0.49
TNFAIP3-202ENST00000420009 TAAR1Q96RJ0 339 aa11.96□□□□□ -0.49
TNFAIP3-202ENST00000420009 IWS1Q96ST2 819 aa11.96□□□□□ -0.49
TNFAIP3-202ENST00000420009 C17orf80Q9BSJ5 609 aa11.96□□□□□ -0.49
TNFAIP3-202ENST00000420009 KATNAL1Q9BW62 490 aa11.96□□□□□ -0.49
TNFAIP3-202ENST00000420009 HELLSQ9NRZ9 838 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms