RNA–Protein interactions for RNA: ENST00000419533.1

UBR4-206, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 5,583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-206ENST00000419533 TRMT44Q8IYL2 757 aaKnown RBP9.26□□□□□ -0.93
UBR4-206ENST00000419533 U2AF1L4Q8WU68 220 aaKnown RBP9.26□□□□□ -0.93
UBR4-206ENST00000419533 PIGSQ96S52 555 aa9.26□□□□□ -0.93
UBR4-206ENST00000419533 CD209Q9NNX6 404 aa9.26□□□□□ -0.93
UBR4-206ENST00000419533 NLRC4Q9NPP4 1024 aa9.26□□□□□ -0.93
UBR4-206ENST00000419533 PPANQ9NQ55 473 aaKnown RBP9.26□□□□□ -0.93
UBR4-206ENST00000419533 RAB20Q9NX57 234 aa9.26□□□□□ -0.93
UBR4-206ENST00000419533 FAM208AQ9UK61 1670 aaKnown RBP9.26□□□□□ -0.93
UBR4-206ENST00000419533 PIK3CAP42336 1068 aa9.26□□□□□ -0.93
UBR4-206ENST00000419533 ZNF445P59923 1031 aa9.26□□□□□ -0.93
UBR4-206ENST00000419533 SETDB1Q15047 1291 aa9.26□□□□□ -0.93
UBR4-206ENST00000419533 KRBA2Q6ZNG9 492 aa9.26□□□□□ -0.93
UBR4-206ENST00000419533 ANKRD36BP1Q96IX9 119 aa9.26□□□□□ -0.93
UBR4-206ENST00000419533 USP28Q96RU2 1077 aa9.26□□□□□ -0.93
UBR4-206ENST00000419533 DDX23Q9BUQ8 820 aaKnown RBP9.26□□□□□ -0.93
UBR4-206ENST00000419533 ZNF341Q9BYN7 854 aa9.26□□□□□ -0.93
UBR4-206ENST00000419533 KIAA1468Q9P260 1216 aa9.26□□□□□ -0.93
UBR4-206ENST00000419533 CNOT7Q9UIV1 285 aaKnown RBP9.26□□□□□ -0.93
UBR4-206ENST00000419533 HNRNPDLO14979 420 aaKnown RBP9.26□□□□□ -0.93
UBR4-206ENST00000419533 ATP2C2O75185 946 aa9.26□□□□□ -0.93
UBR4-206ENST00000419533 SLC16A2P36021 539 aa9.26□□□□□ -0.93
UBR4-206ENST00000419533 CRKP46108 304 aa9.26□□□□□ -0.93
UBR4-206ENST00000419533 LACTBP83111 547 aaPredicted RBP9.26□□□□□ -0.93
UBR4-206ENST00000419533 DIXDC1Q155Q3 683 aa9.26□□□□□ -0.93
UBR4-206ENST00000419533 STRIP1Q5VSL9 837 aa9.26□□□□□ -0.93
UBR4-206ENST00000419533 TYW1BQ6NUM6 668 aa9.26□□□□□ -0.93
UBR4-206ENST00000419533 TBC1D16Q8TBP0 767 aa9.26□□□□□ -0.93
UBR4-206ENST00000419533 HAUS1Q96CS2 278 aa9.26□□□□□ -0.93
UBR4-206ENST00000419533 ANTXR1Q9H6X2 564 aa9.26□□□□□ -0.93
UBR4-206ENST00000419533 SAMD15Q9P1V8 674 aa9.26□□□□□ -0.93
UBR4-206ENST00000419533 AMFRQ9UKV5 643 aa9.26□□□□□ -0.93
UBR4-206ENST00000419533 FAM184BQ9ULE4 1060 aa9.26□□□□□ -0.93
UBR4-206ENST00000419533 PSAPP07602 524 aa9.26□□□□□ -0.93
UBR4-206ENST00000419533 PTPREP23469 700 aa9.26□□□□□ -0.93
UBR4-206ENST00000419533 BPIFB4P59827 614 aa9.26□□□□□ -0.93
UBR4-206ENST00000419533 UBXN2AP68543 259 aa9.26□□□□□ -0.93
UBR4-206ENST00000419533 SCRN1Q12765 414 aa9.26□□□□□ -0.93
UBR4-206ENST00000419533 RASGRF1Q13972 1273 aa9.26□□□□□ -0.93
UBR4-206ENST00000419533 HDXQ7Z353 690 aa9.26□□□□□ -0.93
UBR4-206ENST00000419533 MICALL2Q8IY33 904 aa9.26□□□□□ -0.93
UBR4-206ENST00000419533 SYMPKQ92797 1274 aaKnown RBP9.26□□□□□ -0.93
UBR4-206ENST00000419533 IFIH1Q9BYX4 1025 aaKnown RBP9.26□□□□□ -0.93
UBR4-206ENST00000419533 RBSNQ9H1K0 784 aa9.26□□□□□ -0.93
UBR4-206ENST00000419533 RIPOR2Q9Y4F9 1068 aa9.26□□□□□ -0.93
UBR4-206ENST00000419533 CDK8P49336 464 aa9.25□□□□□ -0.93
UBR4-206ENST00000419533 SARNPP82979 210 aaKnown RBP9.25□□□□□ -0.93
UBR4-206ENST00000419533 CPLX4Q7Z7G2 160 aa9.25□□□□□ -0.93
UBR4-206ENST00000419533 CCDC105Q8IYK2 499 aa9.25□□□□□ -0.93
UBR4-206ENST00000419533 MYRIPQ8NFW9 859 aa9.25□□□□□ -0.93
UBR4-206ENST00000419533 FBXO18Q8NFZ0 1043 aa9.25□□□□□ -0.93
UBR4-206ENST00000419533 DCAF4Q8WV16 495 aa9.25□□□□□ -0.93
UBR4-206ENST00000419533 AKT1S1Q96B36 256 aa9.25□□□□□ -0.93
UBR4-206ENST00000419533 ACCSQ96QU6 501 aa9.25□□□□□ -0.93
UBR4-206ENST00000419533 LRRC4BQ9NT99 713 aa9.25□□□□□ -0.93
UBR4-206ENST00000419533 TTLL3Q9Y4R7 772 aa9.25□□□□□ -0.93
UBR4-206ENST00000419533 NHSL1Q5SYE7 1610 aa9.25□□□□□ -0.93
UBR4-206ENST00000419533 PRKAB2O43741 272 aa9.25□□□□□ -0.93
UBR4-206ENST00000419533 IGKV5-2P06315 115 aa9.25□□□□□ -0.93
UBR4-206ENST00000419533 SRGNP10124 158 aa9.25□□□□□ -0.93
UBR4-206ENST00000419533 ERCC6LQ2NKX8 1250 aa9.25□□□□□ -0.93
UBR4-206ENST00000419533 CFAP221Q4G0U5 840 aa9.25□□□□□ -0.93
UBR4-206ENST00000419533 DAAM2Q86T65 1068 aa9.25□□□□□ -0.93
UBR4-206ENST00000419533 CACTINQ8WUQ7 758 aaKnown RBP9.25□□□□□ -0.93
UBR4-206ENST00000419533 LARP4BQ92615 738 aaKnown RBP9.25□□□□□ -0.93
UBR4-206ENST00000419533 SYT17Q9BSW7 474 aa9.25□□□□□ -0.93
UBR4-206ENST00000419533 APOL6Q9BWW8 343 aa9.25□□□□□ -0.93
UBR4-206ENST00000419533 PARP2Q9UGN5 583 aa9.25□□□□□ -0.93
UBR4-206ENST00000419533 FBXO40Q9UH90 709 aa9.25□□□□□ -0.93
UBR4-206ENST00000419533 SERPINA10Q9UK55 444 aa9.25□□□□□ -0.93
UBR4-206ENST00000419533 CDC37Q16543 378 aaPredicted RBP9.25□□□□□ -0.93
UBR4-206ENST00000419533 AGBL3Q8NEM8 1001 aa9.25□□□□□ -0.93
UBR4-206ENST00000419533 KMT5AQ9NQR1 393 aa9.25□□□□□ -0.93
UBR4-206ENST00000419533 INO80B-WBP1J3KQ70 363 aa9.25□□□□□ -0.93
UBR4-206ENST00000419533 GADD45BO75293 160 aaPredicted RBP9.25□□□□□ -0.93
UBR4-206ENST00000419533 RNASE9P60153 205 aaKnown RBP9.25□□□□□ -0.93
UBR4-206ENST00000419533 MKRN3Q13064 507 aaKnown RBP9.25□□□□□ -0.93
UBR4-206ENST00000419533 FAM81BQ96LP2 452 aa9.25□□□□□ -0.93
UBR4-206ENST00000419533 INO80BQ9C086 356 aaPredicted RBP9.25□□□□□ -0.93
UBR4-206ENST00000419533 RGPD8O14715 1765 aaPredicted RBP9.25□□□□□ -0.93
UBR4-206ENST00000419533 PNMA6FA0A0J9YX94 578 aa9.24□□□□□ -0.93
UBR4-206ENST00000419533 CYP21A2P08686 494 aa9.24□□□□□ -0.93
UBR4-206ENST00000419533 GTF2A1P52655 376 aaPredicted RBP9.24□□□□□ -0.93
UBR4-206ENST00000419533 MTX1Q13505 466 aa9.24□□□□□ -0.93
UBR4-206ENST00000419533 SCYL2Q6P3W7 929 aa9.24□□□□□ -0.93
UBR4-206ENST00000419533 CASC4Q6P4E1 433 aa9.24□□□□□ -0.93
UBR4-206ENST00000419533 ELMSAN1Q6PJG2 1045 aa9.24□□□□□ -0.93
UBR4-206ENST00000419533 TRMT2AQ8IZ69 625 aaKnown RBP9.24□□□□□ -0.93
UBR4-206ENST00000419533 GPATCH11Q8N954 259 aa9.24□□□□□ -0.93
UBR4-206ENST00000419533 CCDC127Q96BQ5 260 aa9.24□□□□□ -0.93
UBR4-206ENST00000419533 CEP170P1Q96L14 293 aa9.24□□□□□ -0.93
UBR4-206ENST00000419533 PUS7LQ9H0K6 701 aaKnown RBP9.24□□□□□ -0.93
UBR4-206ENST00000419533 SLC39A2Q9NP94 309 aa9.24□□□□□ -0.93
UBR4-206ENST00000419533 HOXC10Q9NYD6 342 aa9.24□□□□□ -0.93
UBR4-206ENST00000419533 SHPRHQ149N8 1683 aa9.24□□□□□ -0.93
UBR4-206ENST00000419533 PRPF3O43395 683 aaKnown RBP9.24□□□□□ -0.93
UBR4-206ENST00000419533 PPP6R2O75170 966 aa9.24□□□□□ -0.93
UBR4-206ENST00000419533 MFAP3P55082 362 aa9.24□□□□□ -0.93
UBR4-206ENST00000419533 RNASELQ05823 741 aaKnown RBP9.24□□□□□ -0.93
UBR4-206ENST00000419533 PPP2R5DQ14738 602 aa9.24□□□□□ -0.93
UBR4-206ENST00000419533 TBCKQ8TEA7 893 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms