RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 DCDC2CA8MYV0 355 aa23.42■■□□□ 1.34
GTF3A-202ENST00000419181 MEIS2O14770 477 aa23.42■■□□□ 1.34
GTF3A-202ENST00000419181 RGS20O76081 388 aa23.42■■□□□ 1.34
GTF3A-202ENST00000419181 MYCLP12524 364 aaPredicted RBP23.42■■□□□ 1.34
GTF3A-202ENST00000419181 MDM2Q00987 491 aaPredicted RBP23.42■■□□□ 1.34
GTF3A-202ENST00000419181 FAAP100Q0VG06 881 aa23.42■■□□□ 1.34
GTF3A-202ENST00000419181 USP17L6PQ6QN14 398 aa23.42■■□□□ 1.34
GTF3A-202ENST00000419181 SLC43A3Q8NBI5 491 aa23.42■■□□□ 1.34
GTF3A-202ENST00000419181 ZSWIM6Q9HCJ5 1215 aa23.42■■□□□ 1.34
GTF3A-202ENST00000419181 A6NJR5 290 aa23.41■■□□□ 1.34
GTF3A-202ENST00000419181 METAP2P50579 478 aaKnown RBP eCLIP23.41■■□□□ 1.34
GTF3A-202ENST00000419181 PURAQ00577 322 aaKnown RBP23.41■■□□□ 1.34
GTF3A-202ENST00000419181 LY6KQ17RY6 165 aa23.41■■□□□ 1.34
GTF3A-202ENST00000419181 RUFY3Q7L099 469 aa23.41■■□□□ 1.34
GTF3A-202ENST00000419181 SMARCC2Q8TAQ2 1214 aa23.41■■□□□ 1.34
GTF3A-202ENST00000419181 CUL5Q93034 780 aa23.41■■□□□ 1.34
GTF3A-202ENST00000419181 LBHD1Q9BQE6 289 aaPredicted RBP23.41■■□□□ 1.34
GTF3A-202ENST00000419181 UBE2OQ9C0C9 1292 aaKnown RBP23.41■■□□□ 1.34
GTF3A-202ENST00000419181 POLR3EQ9NVU0 708 aa23.41■■□□□ 1.34
GTF3A-202ENST00000419181 DDX41Q9UJV9 622 aaKnown RBP23.41■■□□□ 1.34
GTF3A-202ENST00000419181 NAP1L2Q9ULW6 460 aaPredicted RBP23.41■■□□□ 1.34
GTF3A-202ENST00000419181 GRIN2DO15399 1336 aa23.4■■□□□ 1.34
GTF3A-202ENST00000419181 SCN10AQ9Y5Y9 1956 aa23.4■■□□□ 1.34
GTF3A-202ENST00000419181 KIAA0355O15063 1070 aa23.4■■□□□ 1.34
GTF3A-202ENST00000419181 GH1P01241 217 aa23.4■■□□□ 1.34
GTF3A-202ENST00000419181 CCND2P30279 289 aa23.4■■□□□ 1.34
GTF3A-202ENST00000419181 ARHGAP1Q07960 439 aa23.4■■□□□ 1.34
GTF3A-202ENST00000419181 ITGA7Q13683 1181 aa23.4■■□□□ 1.34
GTF3A-202ENST00000419181 BRDTQ58F21 947 aaPredicted RBP23.4■■□□□ 1.34
GTF3A-202ENST00000419181 HEATR3Q7Z4Q2 680 aa23.4■■□□□ 1.34
GTF3A-202ENST00000419181 FAM126BQ8IXS8 530 aa23.4■■□□□ 1.34
GTF3A-202ENST00000419181 GPKOWQ92917 476 aaPredicted RBP eCLIP23.4■■□□□ 1.34
GTF3A-202ENST00000419181 TM6SF1Q9BZW5 370 aa23.4■■□□□ 1.34
GTF3A-202ENST00000419181 PSTPIP2Q9H939 334 aa23.4■■□□□ 1.34
GTF3A-202ENST00000419181 MRVI1Q9Y6F6 885 aa23.4■■□□□ 1.34
GTF3A-202ENST00000419181 CCDC196A0A1B0GTZ2 297 aa23.39■■□□□ 1.33
GTF3A-202ENST00000419181 EVCP57679 992 aa23.39■■□□□ 1.33
GTF3A-202ENST00000419181 WWC2Q6AWC2 1192 aa23.39■■□□□ 1.33
GTF3A-202ENST00000419181 SEZ6LQ9BYH1 1024 aa23.39■■□□□ 1.33
GTF3A-202ENST00000419181 TMEM39AQ9NV64 488 aa23.39■■□□□ 1.33
GTF3A-202ENST00000419181 V9GY48 417 aaPredicted RBP23.39■■□□□ 1.33
GTF3A-202ENST00000419181 MYL3P08590 195 aa23.38■■□□□ 1.33
GTF3A-202ENST00000419181 ITGB8P26012 769 aa23.38■■□□□ 1.33
GTF3A-202ENST00000419181 ADD1P35611 737 aaKnown RBP23.38■■□□□ 1.33
GTF3A-202ENST00000419181 PSMC6P62333 389 aa23.38■■□□□ 1.33
GTF3A-202ENST00000419181 KCNV1Q6PIU1 500 aa23.38■■□□□ 1.33
GTF3A-202ENST00000419181 EMID1Q96A84 441 aaPredicted RBP23.38■■□□□ 1.33
GTF3A-202ENST00000419181 TBX21Q9UL17 535 aa23.38■■□□□ 1.33
GTF3A-202ENST00000419181 CYP46A1Q9Y6A2 500 aa23.38■■□□□ 1.33
GTF3A-202ENST00000419181 MYH7BA7E2Y1 1941 aa23.37■■□□□ 1.33
GTF3A-202ENST00000419181 hCG_1984214I3L0E3 225 aa23.37■■□□□ 1.33
GTF3A-202ENST00000419181 KPNA6O60684 536 aa23.37■■□□□ 1.33
GTF3A-202ENST00000419181 MRPS9P82933 396 aaKnown RBP23.37■■□□□ 1.33
GTF3A-202ENST00000419181 TOB2Q14106 344 aaPredicted RBP23.37■■□□□ 1.33
GTF3A-202ENST00000419181 TYW1BQ6NUM6 668 aa23.37■■□□□ 1.33
GTF3A-202ENST00000419181 PPP1R18Q6NYC8 613 aa23.37■■□□□ 1.33
GTF3A-202ENST00000419181 TDHQ8IZJ6 230 aa23.37■■□□□ 1.33
GTF3A-202ENST00000419181 ZNF713Q8N859 430 aaPredicted RBP23.37■■□□□ 1.33
GTF3A-202ENST00000419181 AFG1LQ8WV93 481 aa23.37■■□□□ 1.33
GTF3A-202ENST00000419181 BADQ92934 168 aa23.37■■□□□ 1.33
GTF3A-202ENST00000419181 ZFP91Q96JP5 570 aaPredicted RBP23.37■■□□□ 1.33
GTF3A-202ENST00000419181 INPP4AQ96PE3 977 aaPredicted RBP23.37■■□□□ 1.33
GTF3A-202ENST00000419181 MTG1Q9BT17 334 aaPredicted RBP23.37■■□□□ 1.33
GTF3A-202ENST00000419181 STAM2O75886 525 aa23.36■■□□□ 1.33
GTF3A-202ENST00000419181 CD4P01730 458 aa23.36■■□□□ 1.33
GTF3A-202ENST00000419181 MMP3P08254 477 aa23.36■■□□□ 1.33
GTF3A-202ENST00000419181 TGFB3P10600 412 aa23.36■■□□□ 1.33
GTF3A-202ENST00000419181 PCNX4Q63HM2 1172 aa23.36■■□□□ 1.33
GTF3A-202ENST00000419181 UPF3BQ9BZI7 483 aaKnown RBP23.36■■□□□ 1.33
GTF3A-202ENST00000419181 STXBP3O00186 592 aa23.35■■□□□ 1.33
GTF3A-202ENST00000419181 TLR3O15455 904 aaKnown RBP23.35■■□□□ 1.33
GTF3A-202ENST00000419181 RAG1P15918 1043 aa23.35■■□□□ 1.33
GTF3A-202ENST00000419181 PDIA3P30101 505 aaKnown RBP23.35■■□□□ 1.33
GTF3A-202ENST00000419181 NAPAP54920 295 aa23.35■■□□□ 1.33
GTF3A-202ENST00000419181 UBE2SQ16763 222 aa23.35■■□□□ 1.33
GTF3A-202ENST00000419181 XRRA1Q6P2D8 792 aa23.35■■□□□ 1.33
GTF3A-202ENST00000419181 TEX2Q8IWB9 1127 aa23.35■■□□□ 1.33
GTF3A-202ENST00000419181 BARHL2Q9NY43 387 aa23.35■■□□□ 1.33
GTF3A-202ENST00000419181 UBA1P22314 1058 aaKnown RBP23.34■■□□□ 1.33
GTF3A-202ENST00000419181 SP2Q02086 613 aa23.34■■□□□ 1.33
GTF3A-202ENST00000419181 LAMC2Q13753 1193 aa23.34■■□□□ 1.33
GTF3A-202ENST00000419181 GNPTABQ3T906 1256 aa23.34■■□□□ 1.33
GTF3A-202ENST00000419181 PPTC7Q8NI37 304 aa23.34■■□□□ 1.33
GTF3A-202ENST00000419181 ICAM3P32942 547 aa23.33■■□□□ 1.33
GTF3A-202ENST00000419181 ANAPC15P60006 121 aa23.33■■□□□ 1.33
GTF3A-202ENST00000419181 NTRK3Q16288 839 aa23.33■■□□□ 1.33
GTF3A-202ENST00000419181 PFKFB3Q16875 520 aaPredicted RBP23.33■■□□□ 1.33
GTF3A-202ENST00000419181 CELF3Q5SZQ8 465 aaKnown RBP23.33■■□□□ 1.33
GTF3A-202ENST00000419181 MYSM1Q5VVJ2 828 aa23.33■■□□□ 1.33
GTF3A-202ENST00000419181 DHX37Q8IY37 1157 aaKnown RBP23.33■■□□□ 1.33
GTF3A-202ENST00000419181 ALDH8A1Q9H2A2 487 aaPredicted RBP23.33■■□□□ 1.33
GTF3A-202ENST00000419181 RIC8AQ9NPQ8 531 aa23.33■■□□□ 1.33
GTF3A-202ENST00000419181 SZT2Q5T011 3432 aa23.33■■□□□ 1.33
GTF3A-202ENST00000419181 SPDYE3A6NKU9 549 aa23.32■■□□□ 1.32
GTF3A-202ENST00000419181 SOX1O00570 391 aaPredicted RBP23.32■■□□□ 1.32
GTF3A-202ENST00000419181 B4GALT4O60513 344 aa23.32■■□□□ 1.32
GTF3A-202ENST00000419181 GGPS1O95749 300 aa23.32■■□□□ 1.32
GTF3A-202ENST00000419181 TIMP1P01033 207 aa23.32■■□□□ 1.32
GTF3A-202ENST00000419181 SEMA3FQ13275 785 aa23.32■■□□□ 1.32
GTF3A-202ENST00000419181 DGKDQ16760 1214 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms