RNA–Protein interactions for RNA: ENST00000417633.1

SYNC-203, Transcript of syncoilin, intermediate filament protein, humanhuman

TSL 4

Gene SYNC, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-203ENST00000417633 MAFGO15525 162 aa13.15□□□□□ -0.3
SYNC-203ENST00000417633 EIF3JO75822 258 aaKnown RBP13.15□□□□□ -0.3
SYNC-203ENST00000417633 ECM2O94769 699 aaPredicted RBP13.15□□□□□ -0.3
SYNC-203ENST00000417633 FLT3LGP49771 235 aa13.15□□□□□ -0.3
SYNC-203ENST00000417633 PRMT2P55345 433 aa13.15□□□□□ -0.3
SYNC-203ENST00000417633 UBXN2AP68543 259 aa13.15□□□□□ -0.3
SYNC-203ENST00000417633 DNM1Q05193 864 aaKnown RBP13.15□□□□□ -0.3
SYNC-203ENST00000417633 IRF5Q13568 498 aa13.15□□□□□ -0.3
SYNC-203ENST00000417633 LETM2Q2VYF4 491 aa13.15□□□□□ -0.3
SYNC-203ENST00000417633 Q4G0T1 1027 aa13.15□□□□□ -0.3
SYNC-203ENST00000417633 CEP55Q53EZ4 464 aa13.15□□□□□ -0.3
SYNC-203ENST00000417633 CLEC17AQ6ZS10 378 aa13.15□□□□□ -0.3
SYNC-203ENST00000417633 NIPA1Q7RTP0 329 aa13.15□□□□□ -0.3
SYNC-203ENST00000417633 TRMT44Q8IYL2 757 aaKnown RBP13.15□□□□□ -0.3
SYNC-203ENST00000417633 TNPO1Q92973 898 aaKnown RBP13.15□□□□□ -0.3
SYNC-203ENST00000417633 MXRA8Q9BRK3 442 aa13.15□□□□□ -0.3
SYNC-203ENST00000417633 TINF2Q9BSI4 451 aa13.15□□□□□ -0.3
SYNC-203ENST00000417633 PCDHB6Q9Y5E3 794 aa13.15□□□□□ -0.3
SYNC-203ENST00000417633 MORC2Q9Y6X9 1032 aaPredicted RBP13.15□□□□□ -0.3
SYNC-203ENST00000417633 MYH15Q9Y2K3 1946 aa13.15□□□□□ -0.3
SYNC-203ENST00000417633 MCM3APO60318 1980 aa13.14□□□□□ -0.31
SYNC-203ENST00000417633 IGLV3-22A0A075B6J6 115 aa13.14□□□□□ -0.31
SYNC-203ENST00000417633 FAM86B1E9PN63 330 aa13.14□□□□□ -0.31
SYNC-203ENST00000417633 CCNT1O60563 726 aaKnown RBP13.14□□□□□ -0.31
SYNC-203ENST00000417633 BMP15O95972 392 aa13.14□□□□□ -0.31
SYNC-203ENST00000417633 FAM86B2P0C5J1 330 aa13.14□□□□□ -0.31
SYNC-203ENST00000417633 MYCLP12524 364 aaPredicted RBP13.14□□□□□ -0.31
SYNC-203ENST00000417633 CYP2B6P20813 491 aa13.14□□□□□ -0.31
SYNC-203ENST00000417633 ZNF76P36508 570 aa13.14□□□□□ -0.31
SYNC-203ENST00000417633 PRKCZQ05513 592 aa13.14□□□□□ -0.31
SYNC-203ENST00000417633 PDE4DQ08499 809 aa13.14□□□□□ -0.31
SYNC-203ENST00000417633 ZNF174Q15697 407 aa13.14□□□□□ -0.31
SYNC-203ENST00000417633 LENG9Q96B70 501 aa13.14□□□□□ -0.31
SYNC-203ENST00000417633 INPP4AQ96PE3 977 aaPredicted RBP13.14□□□□□ -0.31
SYNC-203ENST00000417633 JADE2Q9NQC1 790 aa13.14□□□□□ -0.31
SYNC-203ENST00000417633 POLR3EQ9NVU0 708 aa13.14□□□□□ -0.31
SYNC-203ENST00000417633 RTEL1Q9NZ71 1219 aa13.14□□□□□ -0.31
SYNC-203ENST00000417633 CFAP45Q9UL16 551 aa13.14□□□□□ -0.31
SYNC-203ENST00000417633 PCNTO95613 3336 aa13.14□□□□□ -0.31
SYNC-203ENST00000417633 FOXN1O15353 648 aa13.13□□□□□ -0.31
SYNC-203ENST00000417633 RGS20O76081 388 aa13.13□□□□□ -0.31
SYNC-203ENST00000417633 TDP2O95551 362 aa13.13□□□□□ -0.31
SYNC-203ENST00000417633 SNAI1O95863 264 aaPredicted RBP13.13□□□□□ -0.31
SYNC-203ENST00000417633 HSPA8P11142 646 aaKnown RBP13.13□□□□□ -0.31
SYNC-203ENST00000417633 ITGB5P18084 799 aa13.13□□□□□ -0.31
SYNC-203ENST00000417633 ATP2B1P20020 1258 aa13.13□□□□□ -0.31
SYNC-203ENST00000417633 ICAM3P32942 547 aa13.13□□□□□ -0.31
SYNC-203ENST00000417633 NASPP49321 788 aaPredicted RBP13.13□□□□□ -0.31
SYNC-203ENST00000417633 KRT85P78386 507 aa13.13□□□□□ -0.31
SYNC-203ENST00000417633 NBR1Q14596 966 aa13.13□□□□□ -0.31
SYNC-203ENST00000417633 PTPAQ15257 358 aa13.13□□□□□ -0.31
SYNC-203ENST00000417633 SF3A1Q15459 793 aaKnown RBP13.13□□□□□ -0.31
SYNC-203ENST00000417633 ANO1Q5XXA6 986 aa13.13□□□□□ -0.31
SYNC-203ENST00000417633 ARMCX2Q7L311 632 aa13.13□□□□□ -0.31
SYNC-203ENST00000417633 C4orf32Q8N8J7 132 aa13.13□□□□□ -0.31
SYNC-203ENST00000417633 CYP2W1Q8TAV3 490 aa13.13□□□□□ -0.31
SYNC-203ENST00000417633 GPRASP2Q96D09 838 aa13.13□□□□□ -0.31
SYNC-203ENST00000417633 USP28Q96RU2 1077 aa13.13□□□□□ -0.31
SYNC-203ENST00000417633 FLRT1Q9NZU1 646 aa13.13□□□□□ -0.31
SYNC-203ENST00000417633 TFIP11Q9UBB9 837 aaKnown RBP13.13□□□□□ -0.31
SYNC-203ENST00000417633 DDX25Q9UHL0 483 aaKnown RBP13.13□□□□□ -0.31
SYNC-203ENST00000417633 CEP131Q9UPN4 1083 aa13.13□□□□□ -0.31
SYNC-203ENST00000417633 CLIC4Q9Y696 253 aa13.13□□□□□ -0.31
SYNC-203ENST00000417633 KIAA1217Q5T5P2 1943 aa13.13□□□□□ -0.31
SYNC-203ENST00000417633 RBM47A0AV96 593 aaKnown RBP13.12□□□□□ -0.31
SYNC-203ENST00000417633 LAD1O00515 517 aa13.12□□□□□ -0.31
SYNC-203ENST00000417633 TBX3O15119 743 aa13.12□□□□□ -0.31
SYNC-203ENST00000417633 SLC37A4O43826 429 aa13.12□□□□□ -0.31
SYNC-203ENST00000417633 HSPA1AP0DMV8 641 aaKnown RBP13.12□□□□□ -0.31
SYNC-203ENST00000417633 HSPA1BP0DMV9 641 aaKnown RBP13.12□□□□□ -0.31
SYNC-203ENST00000417633 MCM7P33993 719 aa13.12□□□□□ -0.31
SYNC-203ENST00000417633 CTCFP49711 727 aaPredicted RBP13.12□□□□□ -0.31
SYNC-203ENST00000417633 ATP2C1P98194 919 aaPredicted RBP13.12□□□□□ -0.31
SYNC-203ENST00000417633 SETQ01105 290 aaPredicted RBP13.12□□□□□ -0.31
SYNC-203ENST00000417633 SLC39A14Q15043 492 aa13.12□□□□□ -0.31
SYNC-203ENST00000417633 CCL14Q16627 93 aa13.12□□□□□ -0.31
SYNC-203ENST00000417633 FOXD4L6Q3SYB3 417 aaPredicted RBP13.12□□□□□ -0.31
SYNC-203ENST00000417633 GNPTABQ3T906 1256 aa13.12□□□□□ -0.31
SYNC-203ENST00000417633 PRR16Q569H4 304 aa13.12□□□□□ -0.31
SYNC-203ENST00000417633 FOXD4L3Q6VB84 417 aaPredicted RBP13.12□□□□□ -0.31
SYNC-203ENST00000417633 OTOP1Q7RTM1 612 aa13.12□□□□□ -0.31
SYNC-203ENST00000417633 NLRX1Q86UT6 975 aa13.12□□□□□ -0.31
SYNC-203ENST00000417633 PLA2G4DQ86XP0 818 aa13.12□□□□□ -0.31
SYNC-203ENST00000417633 LINC00301Q8NCQ3 95 aa13.12□□□□□ -0.31
SYNC-203ENST00000417633 PXYLP1Q8TE99 480 aa13.12□□□□□ -0.31
SYNC-203ENST00000417633 MTMR9Q96QG7 549 aa13.12□□□□□ -0.31
SYNC-203ENST00000417633 KATNBL1Q9H079 304 aa13.12□□□□□ -0.31
SYNC-203ENST00000417633 ABHD16BQ9H3Z7 469 aa13.12□□□□□ -0.31
SYNC-203ENST00000417633 VTA1Q9NP79 307 aa13.12□□□□□ -0.31
SYNC-203ENST00000417633 KCNMB3Q9NPA1 279 aa13.12□□□□□ -0.31
SYNC-203ENST00000417633 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.12□□□□□ -0.31
SYNC-203ENST00000417633 RCOR1Q9UKL0 485 aa13.12□□□□□ -0.31
SYNC-203ENST00000417633 DDX49Q9Y6V7 483 aaKnown RBP13.12□□□□□ -0.31
SYNC-203ENST00000417633 LRRC37A2A6NM11 1700 aa13.11□□□□□ -0.31
SYNC-203ENST00000417633 SPATA31C2B4DYI2 1134 aa13.11□□□□□ -0.31
SYNC-203ENST00000417633 NEMFO60524 1076 aa13.11□□□□□ -0.31
SYNC-203ENST00000417633 YEATS4O95619 227 aa13.11□□□□□ -0.31
SYNC-203ENST00000417633 TGFB3P10600 412 aa13.11□□□□□ -0.31
SYNC-203ENST00000417633 PTGDRQ13258 359 aa13.11□□□□□ -0.31
SYNC-203ENST00000417633 KCNV1Q6PIU1 500 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms