RNA–Protein interactions for RNA: ENST00000417352.5

COPS3-202, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-202ENST00000417352 RAD50Q92878 1312 aa8.17□□□□□ -1.1
COPS3-202ENST00000417352 CTAGE5O15320 804 aa8.16□□□□□ -1.1
COPS3-202ENST00000417352 B4GALT4O60513 344 aa8.16□□□□□ -1.1
COPS3-202ENST00000417352 TXNP10599 105 aaKnown RBP8.16□□□□□ -1.1
COPS3-202ENST00000417352 PDHBP11177 359 aa8.16□□□□□ -1.1
COPS3-202ENST00000417352 CYP2C9P11712 490 aa8.16□□□□□ -1.1
COPS3-202ENST00000417352 RABGGTBP53611 331 aa8.16□□□□□ -1.1
COPS3-202ENST00000417352 RPS6P62753 249 aaKnown RBP8.16□□□□□ -1.1
COPS3-202ENST00000417352 ZNF543Q08ER8 600 aa8.16□□□□□ -1.1
COPS3-202ENST00000417352 NBR1Q14596 966 aa8.16□□□□□ -1.1
COPS3-202ENST00000417352 PPP2R5BQ15173 497 aa8.16□□□□□ -1.1
COPS3-202ENST00000417352 IMMTQ16891 758 aaKnown RBP8.16□□□□□ -1.1
COPS3-202ENST00000417352 DUSP28Q4G0W2 176 aa8.16□□□□□ -1.1
COPS3-202ENST00000417352 UMODL1Q5DID0 1318 aa8.16□□□□□ -1.1
COPS3-202ENST00000417352 CHD1LQ86WJ1 897 aa8.16□□□□□ -1.1
COPS3-202ENST00000417352 TBC1D10CQ8IV04 446 aa8.16□□□□□ -1.1
COPS3-202ENST00000417352 RPUSD2Q8IZ73 545 aaKnown RBP8.16□□□□□ -1.1
COPS3-202ENST00000417352 RETREG2Q8NC44 543 aa8.16□□□□□ -1.1
COPS3-202ENST00000417352 IL27Q8NEV9 243 aa8.16□□□□□ -1.1
COPS3-202ENST00000417352 SCLYQ96I15 445 aa8.16□□□□□ -1.1
COPS3-202ENST00000417352 TTC14Q96N46 770 aa8.16□□□□□ -1.1
COPS3-202ENST00000417352 UBAC1Q9BSL1 405 aa8.16□□□□□ -1.1
COPS3-202ENST00000417352 PBX4Q9BYU1 374 aa8.16□□□□□ -1.1
COPS3-202ENST00000417352 KATNBL1Q9H079 304 aa8.16□□□□□ -1.1
COPS3-202ENST00000417352 NKX2-4Q9H2Z4 354 aa8.16□□□□□ -1.1
COPS3-202ENST00000417352 TCP11L1Q9NUJ3 509 aa8.16□□□□□ -1.1
COPS3-202ENST00000417352 TRMT13Q9NUP7 481 aaKnown RBP8.16□□□□□ -1.1
COPS3-202ENST00000417352 POLR3EQ9NVU0 708 aa8.16□□□□□ -1.1
COPS3-202ENST00000417352 SLC4A7Q9Y6M7 1214 aa8.16□□□□□ -1.1
COPS3-202ENST00000417352 NEDD4P46934 1319 aa8.15□□□□□ -1.1
COPS3-202ENST00000417352 SALL3Q9BXA9 1300 aa8.15□□□□□ -1.1
COPS3-202ENST00000417352 B4E1Z4 1266 aa8.15□□□□□ -1.1
COPS3-202ENST00000417352 MAP3K7O43318 606 aa8.15□□□□□ -1.1
COPS3-202ENST00000417352 SORBS3O60504 671 aa8.15□□□□□ -1.1
COPS3-202ENST00000417352 IGHDP01880 384 aa8.15□□□□□ -1.1
COPS3-202ENST00000417352 PARP1P09874 1014 aaKnown RBP8.15□□□□□ -1.1
COPS3-202ENST00000417352 SUPT20HL2P0C7V6 817 aa8.15□□□□□ -1.1
COPS3-202ENST00000417352 SKIV2LQ15477 1246 aaKnown RBP8.15□□□□□ -1.1
COPS3-202ENST00000417352 RAB30Q15771 203 aa8.15□□□□□ -1.1
COPS3-202ENST00000417352 CDC37Q16543 378 aaPredicted RBP8.15□□□□□ -1.1
COPS3-202ENST00000417352 NBPF20Q3BBV1 942 aa8.15□□□□□ -1.1
COPS3-202ENST00000417352 ARHGEF16Q5VV41 709 aa8.15□□□□□ -1.1
COPS3-202ENST00000417352 BTNL9Q6UXG8 535 aa8.15□□□□□ -1.1
COPS3-202ENST00000417352 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.15□□□□□ -1.1
COPS3-202ENST00000417352 PNMA1Q8ND90 353 aa8.15□□□□□ -1.1
COPS3-202ENST00000417352 EXOC6Q8TAG9 804 aa8.15□□□□□ -1.1
COPS3-202ENST00000417352 COPS5Q92905 334 aa8.15□□□□□ -1.1
COPS3-202ENST00000417352 ZSCAN10Q96SZ4 725 aaPredicted RBP8.15□□□□□ -1.1
COPS3-202ENST00000417352 MTG1Q9BT17 334 aaPredicted RBP8.15□□□□□ -1.1
COPS3-202ENST00000417352 ALDH8A1Q9H2A2 487 aaPredicted RBP8.15□□□□□ -1.1
COPS3-202ENST00000417352 CXXC1Q9P0U4 656 aaPredicted RBP8.15□□□□□ -1.1
COPS3-202ENST00000417352 TSR3Q9UJK0 312 aaKnown RBP8.15□□□□□ -1.1
COPS3-202ENST00000417352 PNMA2Q9UL42 364 aa8.15□□□□□ -1.1
COPS3-202ENST00000417352 Q9Y3F1 56 aa8.15□□□□□ -1.1
COPS3-202ENST00000417352 MYO9BQ13459 2157 aa8.14□□□□□ -1.11
COPS3-202ENST00000417352 GRIN2DO15399 1336 aa8.14□□□□□ -1.11
COPS3-202ENST00000417352 TNKSO95271 1327 aa8.14□□□□□ -1.11
COPS3-202ENST00000417352 MYH6P13533 1939 aa8.14□□□□□ -1.11
COPS3-202ENST00000417352 HIP1O00291 1037 aa8.14□□□□□ -1.11
COPS3-202ENST00000417352 CFBP00751 764 aa8.14□□□□□ -1.11
COPS3-202ENST00000417352 CD4P01730 458 aa8.14□□□□□ -1.11
COPS3-202ENST00000417352 FGRP09769 529 aa8.14□□□□□ -1.11
COPS3-202ENST00000417352 PCP11498 1178 aaKnown RBP8.14□□□□□ -1.11
COPS3-202ENST00000417352 MYCLP12524 364 aaPredicted RBP8.14□□□□□ -1.11
COPS3-202ENST00000417352 ACTN1P12814 892 aa8.14□□□□□ -1.11
COPS3-202ENST00000417352 MYOGP15173 224 aa8.14□□□□□ -1.11
COPS3-202ENST00000417352 PURAQ00577 322 aaKnown RBP8.14□□□□□ -1.11
COPS3-202ENST00000417352 TTLL4Q14679 1199 aa8.14□□□□□ -1.11
COPS3-202ENST00000417352 LY6KQ17RY6 165 aa8.14□□□□□ -1.11
COPS3-202ENST00000417352 TSR1Q2NL82 804 aaKnown RBP8.14□□□□□ -1.11
COPS3-202ENST00000417352 CCDC178Q5BJE1 867 aa8.14□□□□□ -1.11
COPS3-202ENST00000417352 GPATCH4Q5T3I0 446 aaKnown RBP8.14□□□□□ -1.11
COPS3-202ENST00000417352 PPP2R2DQ66LE6 453 aa8.14□□□□□ -1.11
COPS3-202ENST00000417352 PACS2Q86VP3 889 aa8.14□□□□□ -1.11
COPS3-202ENST00000417352 PLEKHM2Q8IWE5 1019 aa8.14□□□□□ -1.11
COPS3-202ENST00000417352 ADGRF4Q8IZF3 695 aa8.14□□□□□ -1.11
COPS3-202ENST00000417352 SCFD2Q8WU76 684 aa8.14□□□□□ -1.11
COPS3-202ENST00000417352 CLEC4DQ8WXI8 215 aa8.14□□□□□ -1.11
COPS3-202ENST00000417352 BBXQ8WY36 941 aaPredicted RBP8.14□□□□□ -1.11
COPS3-202ENST00000417352 NOC4LQ9BVI4 516 aaKnown RBP8.14□□□□□ -1.11
COPS3-202ENST00000417352 KRT23Q9C075 422 aa8.14□□□□□ -1.11
COPS3-202ENST00000417352 CERS4Q9HA82 394 aa8.14□□□□□ -1.11
COPS3-202ENST00000417352 CTNNA3Q9UI47 895 aa8.14□□□□□ -1.11
COPS3-202ENST00000417352 GBF1Q92538 1859 aa8.13□□□□□ -1.11
COPS3-202ENST00000417352 ABCB11O95342 1321 aa8.13□□□□□ -1.11
COPS3-202ENST00000417352 TMEM265A0A087WTH1 108 aa8.13□□□□□ -1.11
COPS3-202ENST00000417352 ATP2A2P16615 1042 aaKnown RBP8.13□□□□□ -1.11
COPS3-202ENST00000417352 EIF2AK2P19525 551 aaKnown RBP8.13□□□□□ -1.11
COPS3-202ENST00000417352 IRX6P78412 446 aaPredicted RBP8.13□□□□□ -1.11
COPS3-202ENST00000417352 NUCB1Q02818 461 aa8.13□□□□□ -1.11
COPS3-202ENST00000417352 TRDNQ13061 729 aa8.13□□□□□ -1.11
COPS3-202ENST00000417352 STXBP2Q15833 593 aa8.13□□□□□ -1.11
COPS3-202ENST00000417352 PTGISQ16647 500 aa8.13□□□□□ -1.11
COPS3-202ENST00000417352 IFIT1BQ5T764 474 aaKnown RBP8.13□□□□□ -1.11
COPS3-202ENST00000417352 FBXO11Q86XK2 927 aa8.13□□□□□ -1.11
COPS3-202ENST00000417352 DGKHQ86XP1 1220 aa8.13□□□□□ -1.11
COPS3-202ENST00000417352 MCF2L2Q86YR7 1114 aa8.13□□□□□ -1.11
COPS3-202ENST00000417352 DNERQ8NFT8 737 aa8.13□□□□□ -1.11
COPS3-202ENST00000417352 NSUN6Q8TEA1 469 aaKnown RBP8.13□□□□□ -1.11
COPS3-202ENST00000417352 PIBF1Q8WXW3 757 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms