RNA–Protein interactions for RNA: ENST00000417172.5

CALD1-204, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 1,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-204ENST00000417172 MCF2L2Q86YR7 1114 aa19.15■□□□□ 0.66
CALD1-204ENST00000417172 IQUBQ8NA54 791 aa19.15■□□□□ 0.66
CALD1-204ENST00000417172 TEX13BQ9BXU2 312 aa19.15■□□□□ 0.66
CALD1-204ENST00000417172 CBX8Q9HC52 389 aa19.15■□□□□ 0.66
CALD1-204ENST00000417172 MYPNQ86TC9 1320 aa19.15■□□□□ 0.66
CALD1-204ENST00000417172 HOXA7P31268 230 aaPredicted RBP19.15■□□□□ 0.66
CALD1-204ENST00000417172 OAZ1P54368 228 aa19.15■□□□□ 0.66
CALD1-204ENST00000417172 IRX3P78415 501 aaPredicted RBP19.15■□□□□ 0.66
CALD1-204ENST00000417172 GHRHRQ02643 423 aa19.15■□□□□ 0.66
CALD1-204ENST00000417172 BAATQ14032 418 aaPredicted RBP19.15■□□□□ 0.66
CALD1-204ENST00000417172 BLZF1Q9H2G9 400 aa19.15■□□□□ 0.66
CALD1-204ENST00000417172 PCDHA12Q9UN75 941 aa19.15■□□□□ 0.66
CALD1-204ENST00000417172 AGTPBP1Q9UPW5 1226 aa19.15■□□□□ 0.66
CALD1-204ENST00000417172 RPTORQ8N122 1335 aa19.15■□□□□ 0.66
CALD1-204ENST00000417172 ATP2A1O14983 1001 aa19.14■□□□□ 0.65
CALD1-204ENST00000417172 EIF2AK2P19525 551 aaKnown RBP19.14■□□□□ 0.65
CALD1-204ENST00000417172 RRAGBQ5VZM2 374 aa19.14■□□□□ 0.65
CALD1-204ENST00000417172 GPAT2Q6NUI2 795 aa19.14■□□□□ 0.65
CALD1-204ENST00000417172 LBX2Q6XYB7 198 aa19.14■□□□□ 0.65
CALD1-204ENST00000417172 R3HDMLQ9H3Y0 253 aa19.14■□□□□ 0.65
CALD1-204ENST00000417172 BMP6P22004 513 aa19.13■□□□□ 0.65
CALD1-204ENST00000417172 ECM1Q16610 540 aa19.13■□□□□ 0.65
CALD1-204ENST00000417172 CST9Q5W186 159 aa19.13■□□□□ 0.65
CALD1-204ENST00000417172 ELOA2Q8IYF1 753 aaPredicted RBP19.13■□□□□ 0.65
CALD1-204ENST00000417172 FAM200AQ8TCP9 573 aa19.13■□□□□ 0.65
CALD1-204ENST00000417172 PAGR1Q9BTK6 254 aa19.13■□□□□ 0.65
CALD1-204ENST00000417172 ZNF165P49910 485 aa19.13■□□□□ 0.65
CALD1-204ENST00000417172 HERVK_113P62684 666 aa19.13■□□□□ 0.65
CALD1-204ENST00000417172 GRB10Q13322 594 aa19.13■□□□□ 0.65
CALD1-204ENST00000417172 TEX2Q8IWB9 1127 aa19.13■□□□□ 0.65
CALD1-204ENST00000417172 PNMA5Q96PV4 448 aa19.13■□□□□ 0.65
CALD1-204ENST00000417172 EHMT1Q9H9B1 1298 aa19.13■□□□□ 0.65
CALD1-204ENST00000417172 ANO10Q9NW15 660 aa19.13■□□□□ 0.65
CALD1-204ENST00000417172 MAN1B1Q9UKM7 699 aa19.13■□□□□ 0.65
CALD1-204ENST00000417172 ITGBL1O95965 494 aaPredicted RBP19.12■□□□□ 0.65
CALD1-204ENST00000417172 ARP10275 920 aa19.12■□□□□ 0.65
CALD1-204ENST00000417172 NLRP12P59046 1061 aa19.12■□□□□ 0.65
CALD1-204ENST00000417172 SPIRE1Q08AE8 756 aa19.12■□□□□ 0.65
CALD1-204ENST00000417172 SNAPC2Q13487 334 aa19.12■□□□□ 0.65
CALD1-204ENST00000417172 CUL4BQ13620 913 aa19.12■□□□□ 0.65
CALD1-204ENST00000417172 PDIA5Q14554 519 aa19.12■□□□□ 0.65
CALD1-204ENST00000417172 KANK3Q6NY19 840 aa19.12■□□□□ 0.65
CALD1-204ENST00000417172 PLA2G4DQ86XP0 818 aa19.12■□□□□ 0.65
CALD1-204ENST00000417172 SNX29Q8TEQ0 813 aa19.12■□□□□ 0.65
CALD1-204ENST00000417172 TXNRD2Q9NNW7 524 aa19.12■□□□□ 0.65
CALD1-204ENST00000417172 A1CFQ9NQ94 594 aaKnown RBP19.12■□□□□ 0.65
CALD1-204ENST00000417172 HOOK1Q9UJC3 728 aaKnown RBP19.12■□□□□ 0.65
CALD1-204ENST00000417172 KIAA1217Q5T5P2 1943 aa19.12■□□□□ 0.65
CALD1-204ENST00000417172 CNMDO75829 334 aa19.12■□□□□ 0.65
CALD1-204ENST00000417172 ITGB5P18084 799 aa19.12■□□□□ 0.65
CALD1-204ENST00000417172 MRPS9P82933 396 aaKnown RBP19.12■□□□□ 0.65
CALD1-204ENST00000417172 DPYDQ12882 1025 aa19.12■□□□□ 0.65
CALD1-204ENST00000417172 CEP55Q53EZ4 464 aa19.12■□□□□ 0.65
CALD1-204ENST00000417172 SLFN12Q8IYM2 578 aa19.12■□□□□ 0.65
CALD1-204ENST00000417172 SMARCE1Q969G3 411 aa19.12■□□□□ 0.65
CALD1-204ENST00000417172 RMDN3Q96TC7 470 aa19.12■□□□□ 0.65
CALD1-204ENST00000417172 CCDC39Q9UFE4 941 aa19.12■□□□□ 0.65
CALD1-204ENST00000417172 USP25Q9UHP3 1055 aa19.12■□□□□ 0.65
CALD1-204ENST00000417172 DCAF8L1A6NGE4 600 aa19.11■□□□□ 0.65
CALD1-204ENST00000417172 SARSP49591 514 aaKnown RBP19.11■□□□□ 0.65
CALD1-204ENST00000417172 PGM5Q15124 567 aa19.11■□□□□ 0.65
CALD1-204ENST00000417172 KCNK18Q7Z418 384 aa19.11■□□□□ 0.65
CALD1-204ENST00000417172 C2orf69Q8N8R5 385 aa19.11■□□□□ 0.65
CALD1-204ENST00000417172 RAB34Q9BZG1 259 aa19.11■□□□□ 0.65
CALD1-204ENST00000417172 ACAD9Q9H845 621 aa19.11■□□□□ 0.65
CALD1-204ENST00000417172 PXMP2Q9NR77 195 aa19.11■□□□□ 0.65
CALD1-204ENST00000417172 PNMA2Q9UL42 364 aa19.11■□□□□ 0.65
CALD1-204ENST00000417172 FRMPD4Q14CM0 1322 aa19.11■□□□□ 0.65
CALD1-204ENST00000417172 CYP2C8P10632 490 aa19.1■□□□□ 0.65
CALD1-204ENST00000417172 NT5DC1Q5TFE4 455 aa19.1■□□□□ 0.65
CALD1-204ENST00000417172 NCAPH2Q6IBW4 605 aa19.1■□□□□ 0.65
CALD1-204ENST00000417172 FASTKD5Q7L8L6 764 aaKnown RBP19.1■□□□□ 0.65
CALD1-204ENST00000417172 SPATA20Q8TB22 786 aa19.1■□□□□ 0.65
CALD1-204ENST00000417172 WDR11Q9BZH6 1224 aa19.1■□□□□ 0.65
CALD1-204ENST00000417172 CYP39A1Q9NYL5 469 aa19.1■□□□□ 0.65
CALD1-204ENST00000417172 PKD2L1Q9P0L9 805 aa19.1■□□□□ 0.65
CALD1-204ENST00000417172 VAV3Q9UKW4 847 aa19.1■□□□□ 0.65
CALD1-204ENST00000417172 DOCK5Q9H7D0 1870 aa19.1■□□□□ 0.65
CALD1-204ENST00000417172 TBX3O15119 743 aa19.1■□□□□ 0.65
CALD1-204ENST00000417172 AP5Z1O43299 807 aa19.1■□□□□ 0.65
CALD1-204ENST00000417172 MYCLP12524 364 aaPredicted RBP19.1■□□□□ 0.65
CALD1-204ENST00000417172 DHX8Q14562 1220 aaKnown RBP19.1■□□□□ 0.65
CALD1-204ENST00000417172 IQCB1Q15051 598 aa19.1■□□□□ 0.65
CALD1-204ENST00000417172 CALML4Q96GE6 196 aa19.1■□□□□ 0.65
CALD1-204ENST00000417172 MS4A4AQ96JQ5 239 aa19.1■□□□□ 0.65
CALD1-204ENST00000417172 MXRA8Q9BRK3 442 aa19.1■□□□□ 0.65
CALD1-204ENST00000417172 PYM1Q9BRP8 204 aaKnown RBP19.1■□□□□ 0.65
CALD1-204ENST00000417172 SPATC1LQ9H0A9 340 aa19.1■□□□□ 0.65
CALD1-204ENST00000417172 BLOC1S4Q9NUP1 217 aa19.1■□□□□ 0.65
CALD1-204ENST00000417172 MEIS1O00470 390 aa19.09■□□□□ 0.65
CALD1-204ENST00000417172 FKBP1BP68106 108 aa19.09■□□□□ 0.65
CALD1-204ENST00000417172 ARHGEF16Q5VV41 709 aa19.09■□□□□ 0.65
CALD1-204ENST00000417172 KRT79Q5XKE5 535 aa19.09■□□□□ 0.65
CALD1-204ENST00000417172 PCNX4Q63HM2 1172 aa19.09■□□□□ 0.65
CALD1-204ENST00000417172 CHADLQ6NUI6 762 aa19.09■□□□□ 0.65
CALD1-204ENST00000417172 DHX40Q8IX18 779 aaKnown RBP19.09■□□□□ 0.65
CALD1-204ENST00000417172 FAM20AQ96MK3 541 aa19.09■□□□□ 0.65
CALD1-204ENST00000417172 PDCD2LQ9BRP1 358 aa19.09■□□□□ 0.65
CALD1-204ENST00000417172 MAP3K20Q9NYL2 800 aaKnown RBP19.09■□□□□ 0.65
CALD1-204ENST00000417172 RBPJLQ9UBG7 517 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms