RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 CCND2P30279 289 aa18.04■□□□□ 0.48
ITGB1-204ENST00000417122 VSIG10LQ86VR7 867 aa18.04■□□□□ 0.48
ITGB1-204ENST00000417122 MTG1Q9BT17 334 aaPredicted RBP18.04■□□□□ 0.48
ITGB1-204ENST00000417122 ZBTB43O43298 467 aa18.03■□□□□ 0.48
ITGB1-204ENST00000417122 CENPBP07199 599 aaPredicted RBP18.03■□□□□ 0.48
ITGB1-204ENST00000417122 FPGSQ05932 587 aa18.03■□□□□ 0.48
ITGB1-204ENST00000417122 ARHGAP1Q07960 439 aa18.03■□□□□ 0.48
ITGB1-204ENST00000417122 SHHQ15465 462 aa18.03■□□□□ 0.48
ITGB1-204ENST00000417122 C9orf50Q5SZB4 431 aa18.03■□□□□ 0.48
ITGB1-204ENST00000417122 IL31RAQ8NI17 732 aa18.03■□□□□ 0.48
ITGB1-204ENST00000417122 SMARCC2Q8TAQ2 1214 aa18.03■□□□□ 0.48
ITGB1-204ENST00000417122 CUL5Q93034 780 aa18.03■□□□□ 0.48
ITGB1-204ENST00000417122 JAKMIP1Q96N16 626 aaKnown RBP18.03■□□□□ 0.48
ITGB1-204ENST00000417122 RBM28Q9NW13 759 aaKnown RBP18.03■□□□□ 0.48
ITGB1-204ENST00000417122 BRPF3Q9ULD4 1205 aa18.03■□□□□ 0.48
ITGB1-204ENST00000417122 SNX14Q9Y5W7 946 aa18.03■□□□□ 0.48
ITGB1-204ENST00000417122 MYH7BA7E2Y1 1941 aa18.03■□□□□ 0.48
ITGB1-204ENST00000417122 hCG_1642624A0A1W2PR95 340 aa18.02■□□□□ 0.48
ITGB1-204ENST00000417122 B4GALT4O60513 344 aa18.02■□□□□ 0.48
ITGB1-204ENST00000417122 RGS20O76081 388 aa18.02■□□□□ 0.48
ITGB1-204ENST00000417122 CPA1P15085 419 aa18.02■□□□□ 0.48
ITGB1-204ENST00000417122 FGD1P98174 961 aa18.02■□□□□ 0.48
ITGB1-204ENST00000417122 MFSD5Q6N075 450 aa18.02■□□□□ 0.48
ITGB1-204ENST00000417122 KCNV1Q6PIU1 500 aa18.02■□□□□ 0.48
ITGB1-204ENST00000417122 USP17L6PQ6QN14 398 aa18.02■□□□□ 0.48
ITGB1-204ENST00000417122 AFG1LQ8WV93 481 aa18.02■□□□□ 0.48
ITGB1-204ENST00000417122 PPP1R12CQ9BZL4 782 aa18.02■□□□□ 0.48
ITGB1-204ENST00000417122 TRPV6Q9H1D0 765 aa18.02■□□□□ 0.48
ITGB1-204ENST00000417122 ALDH8A1Q9H2A2 487 aaPredicted RBP18.02■□□□□ 0.48
ITGB1-204ENST00000417122 SCN10AQ9Y5Y9 1956 aa18.02■□□□□ 0.47
ITGB1-204ENST00000417122 FRMPD4Q14CM0 1322 aa18.01■□□□□ 0.47
ITGB1-204ENST00000417122 KLF18A0A0U1RQI7 1052 aa18.01■□□□□ 0.47
ITGB1-204ENST00000417122 MEIS2O14770 477 aa18.01■□□□□ 0.47
ITGB1-204ENST00000417122 MMP3P08254 477 aa18.01■□□□□ 0.47
ITGB1-204ENST00000417122 EPHB4P54760 987 aa18.01■□□□□ 0.47
ITGB1-204ENST00000417122 RTN1Q16799 776 aa18.01■□□□□ 0.47
ITGB1-204ENST00000417122 GPR153Q6NV75 609 aa18.01■□□□□ 0.47
ITGB1-204ENST00000417122 BLOC1S2Q6QNY1 142 aa18.01■□□□□ 0.47
ITGB1-204ENST00000417122 EMID1Q96A84 441 aaPredicted RBP18.01■□□□□ 0.47
ITGB1-204ENST00000417122 ZFP91Q96JP5 570 aaPredicted RBP18.01■□□□□ 0.47
ITGB1-204ENST00000417122 CNTNAP5Q8WYK1 1306 aa18■□□□□ 0.47
ITGB1-204ENST00000417122 GOLGA8AA7E2F4 631 aa18■□□□□ 0.47
ITGB1-204ENST00000417122 GOLGA8BA8MQT2 603 aa18■□□□□ 0.47
ITGB1-204ENST00000417122 PIK3CDO00329 1044 aa18■□□□□ 0.47
ITGB1-204ENST00000417122 LAMC2Q13753 1193 aa18■□□□□ 0.47
ITGB1-204ENST00000417122 NBPF20Q3BBV1 942 aa18■□□□□ 0.47
ITGB1-204ENST00000417122 Q6ZUG5 572 aa18■□□□□ 0.47
ITGB1-204ENST00000417122 DHX37Q8IY37 1157 aaKnown RBP18■□□□□ 0.47
ITGB1-204ENST00000417122 TMEM199Q8N511 208 aa18■□□□□ 0.47
ITGB1-204ENST00000417122 HIPK3Q9H422 1215 aa18■□□□□ 0.47
ITGB1-204ENST00000417122 PSTPIP2Q9H939 334 aa18■□□□□ 0.47
ITGB1-204ENST00000417122 EPB41L2O43491 1005 aaKnown RBP17.99■□□□□ 0.47
ITGB1-204ENST00000417122 STAM2O75886 525 aa17.99■□□□□ 0.47
ITGB1-204ENST00000417122 TGFB3P10600 412 aa17.99■□□□□ 0.47
ITGB1-204ENST00000417122 CASTP20810 708 aaKnown RBP17.99■□□□□ 0.47
ITGB1-204ENST00000417122 PSMA5P28066 241 aa17.99■□□□□ 0.47
ITGB1-204ENST00000417122 CYP2C18P33260 490 aa17.99■□□□□ 0.47
ITGB1-204ENST00000417122 RCAN1P53805 252 aa17.99■□□□□ 0.47
ITGB1-204ENST00000417122 MRPS9P82933 396 aaKnown RBP17.99■□□□□ 0.47
ITGB1-204ENST00000417122 PPIGQ13427 754 aaKnown RBP eCLIP17.99■□□□□ 0.47
ITGB1-204ENST00000417122 DGKDQ16760 1214 aa17.99■□□□□ 0.47
ITGB1-204ENST00000417122 FAM47CQ5HY64 1035 aa17.99■□□□□ 0.47
ITGB1-204ENST00000417122 NFRKBQ6P4R8 1299 aa17.99■□□□□ 0.47
ITGB1-204ENST00000417122 HEATR3Q7Z4Q2 680 aa17.99■□□□□ 0.47
ITGB1-204ENST00000417122 TRMT13Q9NUP7 481 aaKnown RBP17.99■□□□□ 0.47
ITGB1-204ENST00000417122 NAP1L2Q9ULW6 460 aaPredicted RBP17.99■□□□□ 0.47
ITGB1-204ENST00000417122 SUPT20HL2P0C7V6 817 aa17.98■□□□□ 0.47
ITGB1-204ENST00000417122 CSF2RAP15509 400 aa17.98■□□□□ 0.47
ITGB1-204ENST00000417122 RPS6KB1P23443 525 aa17.98■□□□□ 0.47
ITGB1-204ENST00000417122 PTPN11Q06124 597 aaPredicted RBP17.98■□□□□ 0.47
ITGB1-204ENST00000417122 APOBRQ0VD83 1088 aa17.98■□□□□ 0.47
ITGB1-204ENST00000417122 FUT2Q10981 343 aa17.98■□□□□ 0.47
ITGB1-204ENST00000417122 GNPTABQ3T906 1256 aa17.98■□□□□ 0.47
ITGB1-204ENST00000417122 CELF3Q5SZQ8 465 aaKnown RBP17.98■□□□□ 0.47
ITGB1-204ENST00000417122 MYSM1Q5VVJ2 828 aa17.98■□□□□ 0.47
ITGB1-204ENST00000417122 PPTC7Q8NI37 304 aa17.98■□□□□ 0.47
ITGB1-204ENST00000417122 PPP1R13LQ8WUF5 828 aa17.98■□□□□ 0.47
ITGB1-204ENST00000417122 GPKOWQ92917 476 aaPredicted RBP eCLIP17.98■□□□□ 0.472e-6■■■■□ 21.7
ITGB1-204ENST00000417122 RNPC3Q96LT9 517 aaKnown RBP17.98■□□□□ 0.47
ITGB1-204ENST00000417122 NOC4LQ9BVI4 516 aaKnown RBP17.98■□□□□ 0.47
ITGB1-204ENST00000417122 FAM217BQ9NTX9 383 aaPredicted RBP17.98■□□□□ 0.47
ITGB1-204ENST00000417122 RTEL1Q9NZ71 1219 aa17.98■□□□□ 0.47
ITGB1-204ENST00000417122 SZT2Q5T011 3432 aa17.98■□□□□ 0.47
ITGB1-204ENST00000417122 UMODL1Q5DID0 1318 aa17.98■□□□□ 0.47
ITGB1-204ENST00000417122 SORBS3O60504 671 aa17.97■□□□□ 0.47
ITGB1-204ENST00000417122 GGPS1O95749 300 aa17.97■□□□□ 0.47
ITGB1-204ENST00000417122 UBA1P22314 1058 aaKnown RBP17.97■□□□□ 0.47
ITGB1-204ENST00000417122 CDC27P30260 824 aa17.97■□□□□ 0.47
ITGB1-204ENST00000417122 METAP2P50579 478 aaKnown RBP eCLIP17.97■□□□□ 0.47
ITGB1-204ENST00000417122 CHMP4BP1P59074 171 aa17.97■□□□□ 0.47
ITGB1-204ENST00000417122 SP2Q02086 613 aa17.97■□□□□ 0.47
ITGB1-204ENST00000417122 PCNX4Q63HM2 1172 aa17.97■□□□□ 0.47
ITGB1-204ENST00000417122 WWC2Q6AWC2 1192 aa17.97■□□□□ 0.47
ITGB1-204ENST00000417122 FBXL16Q8N461 479 aa17.97■□□□□ 0.47
ITGB1-204ENST00000417122 KAT2BQ92831 832 aa17.97■□□□□ 0.47
ITGB1-204ENST00000417122 BRF1Q92994 677 aa17.97■□□□□ 0.47
ITGB1-204ENST00000417122 INPP4AQ96PE3 977 aaPredicted RBP17.97■□□□□ 0.47
ITGB1-204ENST00000417122 USP26Q9BXU7 913 aa17.97■□□□□ 0.47
ITGB1-204ENST00000417122 V9GY48 417 aaPredicted RBP17.97■□□□□ 0.47
ITGB1-204ENST00000417122 LAMA3Q16787 3333 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms