RNA–Protein interactions for RNA: ENST00000417101.1

ACTB-203, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 472 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-203ENST00000417101 HOMER1Q86YM7 354 aa25.33■■□□□ 1.65
ACTB-203ENST00000417101 RETREG2Q8NC44 543 aa25.33■■□□□ 1.65
ACTB-203ENST00000417101 SLC28A3Q9HAS3 691 aa25.33■■□□□ 1.65
ACTB-203ENST00000417101 SENP2Q9HC62 589 aa25.33■■□□□ 1.65
ACTB-203ENST00000417101 DDX41Q9UJV9 622 aaKnown RBP25.33■■□□□ 1.65
ACTB-203ENST00000417101 ERICH2A1L162 156 aa25.32■■□□□ 1.64
ACTB-203ENST00000417101 E7EWF7 191 aa25.32■■□□□ 1.64
ACTB-203ENST00000417101 PITPNM1O00562 1244 aa25.32■■□□□ 1.64
ACTB-203ENST00000417101 GHRHRQ02643 423 aa25.32■■□□□ 1.64
ACTB-203ENST00000417101 GRM4Q14833 912 aa25.32■■□□□ 1.64
ACTB-203ENST00000417101 MRVI1Q9Y6F6 885 aa25.32■■□□□ 1.64
ACTB-203ENST00000417101 SGSM2O43147 1006 aa25.31■■□□□ 1.64
ACTB-203ENST00000417101 MYCLP12524 364 aaPredicted RBP25.31■■□□□ 1.64
ACTB-203ENST00000417101 ATP2A2P16615 1042 aaKnown RBP25.31■■□□□ 1.64
ACTB-203ENST00000417101 CASTP20810 708 aaKnown RBP25.31■■□□□ 1.64
ACTB-203ENST00000417101 HOXA13P31271 388 aaPredicted RBP25.31■■□□□ 1.64
ACTB-203ENST00000417101 WTAPQ15007 396 aa25.31■■□□□ 1.64
ACTB-203ENST00000417101 PTGISQ16647 500 aa25.31■■□□□ 1.64
ACTB-203ENST00000417101 NCOA7Q8NI08 942 aa25.31■■□□□ 1.64
ACTB-203ENST00000417101 KAT2BQ92831 832 aa25.31■■□□□ 1.64
ACTB-203ENST00000417101 PIGSQ96S52 555 aa25.31■■□□□ 1.64
ACTB-203ENST00000417101 IQCF3P0C7M6 154 aa25.3■■□□□ 1.64
ACTB-203ENST00000417101 RFC2P35250 354 aa25.3■■□□□ 1.64
ACTB-203ENST00000417101 BFSP2Q13515 415 aa25.3■■□□□ 1.64
ACTB-203ENST00000417101 SART3Q15020 963 aaKnown RBP25.3■■□□□ 1.64
ACTB-203ENST00000417101 DGKDQ16760 1214 aa25.3■■□□□ 1.64
ACTB-203ENST00000417101 STOX1Q6ZVD7 989 aa25.3■■□□□ 1.64
ACTB-203ENST00000417101 PDCD2LQ9BRP1 358 aa25.3■■□□□ 1.64
ACTB-203ENST00000417101 RIOX1Q9H6W3 641 aa25.3■■□□□ 1.64
ACTB-203ENST00000417101 MAP3K20Q9NYL2 800 aaKnown RBP25.3■■□□□ 1.64
ACTB-203ENST00000417101 SPTBN5Q9NRC6 3674 aaKnown RBP25.29■■□□□ 1.64
ACTB-203ENST00000417101 MYOGP15173 224 aa25.29■■□□□ 1.64
ACTB-203ENST00000417101 LAMC2Q13753 1193 aa25.29■■□□□ 1.64
ACTB-203ENST00000417101 GDF6Q6KF10 455 aaPredicted RBP25.29■■□□□ 1.64
ACTB-203ENST00000417101 PPM1EQ8WY54 764 aa25.29■■□□□ 1.64
ACTB-203ENST00000417101 EMID1Q96A84 441 aaPredicted RBP25.29■■□□□ 1.64
ACTB-203ENST00000417101 FTOQ9C0B1 505 aaKnown RBP eCLIP25.29■■□□□ 1.64
ACTB-203ENST00000417101 PCDHA11Q9Y5I1 949 aa25.29■■□□□ 1.64
ACTB-203ENST00000417101 KIAA1217Q5T5P2 1943 aa25.28■■□□□ 1.64
ACTB-203ENST00000417101 CYTH3O43739 400 aa25.28■■□□□ 1.64
ACTB-203ENST00000417101 RGS20O76081 388 aa25.28■■□□□ 1.64
ACTB-203ENST00000417101 ACTN1P12814 892 aa25.28■■□□□ 1.64
ACTB-203ENST00000417101 TROAPQ12815 778 aa25.28■■□□□ 1.64
ACTB-203ENST00000417101 TRAF1Q13077 416 aa25.28■■□□□ 1.64
ACTB-203ENST00000417101 ADGRE1Q14246 886 aa25.28■■□□□ 1.64
ACTB-203ENST00000417101 TMEM67Q5HYA8 995 aa25.28■■□□□ 1.64
ACTB-203ENST00000417101 SESTD1Q86VW0 696 aa25.28■■□□□ 1.64
ACTB-203ENST00000417101 DHX37Q8IY37 1157 aaKnown RBP25.28■■□□□ 1.64
ACTB-203ENST00000417101 SCN5AQ14524 2016 aa25.28■■□□□ 1.64
ACTB-203ENST00000417101 GCOM1H8Y6P7 765 aaPredicted RBP25.27■■□□□ 1.64
ACTB-203ENST00000417101 POLR2MP0CAP2 368 aa25.27■■□□□ 1.64
ACTB-203ENST00000417101 IGFBP4P22692 258 aa25.27■■□□□ 1.64
ACTB-203ENST00000417101 PPP2R2DQ66LE6 453 aa25.27■■□□□ 1.64
ACTB-203ENST00000417101 CATIPQ7Z7H3 387 aa25.27■■□□□ 1.64
ACTB-203ENST00000417101 VSIG10LQ86VR7 867 aa25.27■■□□□ 1.64
ACTB-203ENST00000417101 SAMD3Q8N6K7 520 aa25.27■■□□□ 1.64
ACTB-203ENST00000417101 CCDC155Q8N6L0 562 aa25.27■■□□□ 1.64
ACTB-203ENST00000417101 IL31RAQ8NI17 732 aa25.27■■□□□ 1.64
ACTB-203ENST00000417101 PPTC7Q8NI37 304 aa25.27■■□□□ 1.64
ACTB-203ENST00000417101 MAP4K1Q92918 833 aa25.27■■□□□ 1.64
ACTB-203ENST00000417101 CTAGE1Q96RT6 745 aa25.27■■□□□ 1.64
ACTB-203ENST00000417101 BAZ2BQ9UIF8 2168 aaKnown RBP25.27■■□□□ 1.64
ACTB-203ENST00000417101 GBF1Q92538 1859 aa25.26■■□□□ 1.63
ACTB-203ENST00000417101 PNMA6FA0A0J9YX94 578 aa25.26■■□□□ 1.63
ACTB-203ENST00000417101 SORBS3O60504 671 aa25.26■■□□□ 1.63
ACTB-203ENST00000417101 ZNF286BP0CG31 522 aa25.26■■□□□ 1.63
ACTB-203ENST00000417101 PSEN2P49810 448 aa25.26■■□□□ 1.63
ACTB-203ENST00000417101 ANTXR2P58335 489 aa25.26■■□□□ 1.63
ACTB-203ENST00000417101 PGM5Q15124 567 aa25.26■■□□□ 1.63
ACTB-203ENST00000417101 FCHSD1Q86WN1 690 aa25.26■■□□□ 1.63
ACTB-203ENST00000417101 C7orf31Q8N865 590 aa25.26■■□□□ 1.63
ACTB-203ENST00000417101 TTC28Q96AY4 2481 aa25.26■■□□□ 1.63
ACTB-203ENST00000417101 MB21D2Q8IYB1 491 aaPredicted RBP25.25■■□□□ 1.63
ACTB-203ENST00000417101 CAGE1Q8TC20 777 aa25.25■■□□□ 1.63
ACTB-203ENST00000417101 IGDCC4Q8TDY8 1250 aa25.25■■□□□ 1.63
ACTB-203ENST00000417101 AFAP1L1Q8TED9 768 aa25.25■■□□□ 1.63
ACTB-203ENST00000417101 PIBF1Q8WXW3 757 aa25.25■■□□□ 1.63
ACTB-203ENST00000417101 ZFP91Q96JP5 570 aaPredicted RBP25.25■■□□□ 1.63
ACTB-203ENST00000417101 ALG1Q9BT22 464 aa25.25■■□□□ 1.63
ACTB-203ENST00000417101 PRDM6Q9NQX0 595 aa25.25■■□□□ 1.63
ACTB-203ENST00000417101 HDAC6Q9UBN7 1215 aa25.25■■□□□ 1.63
ACTB-203ENST00000417101 GTF2IRD1Q9UHL9 959 aa25.25■■□□□ 1.63
ACTB-203ENST00000417101 RBM8AQ9Y5S9 174 aaKnown RBP25.25■■□□□ 1.63
ACTB-203ENST00000417101 CCND2P30279 289 aa25.24■■□□□ 1.63
ACTB-203ENST00000417101 MFSD10Q14728 455 aa25.24■■□□□ 1.63
ACTB-203ENST00000417101 MYSM1Q5VVJ2 828 aa25.24■■□□□ 1.63
ACTB-203ENST00000417101 KCNV1Q6PIU1 500 aa25.24■■□□□ 1.63
ACTB-203ENST00000417101 DHX38Q92620 1227 aaKnown RBP25.24■■□□□ 1.63
ACTB-203ENST00000417101 KATNAL1Q9BW62 490 aa25.24■■□□□ 1.63
ACTB-203ENST00000417101 GGPS1O95749 300 aa25.23■■□□□ 1.63
ACTB-203ENST00000417101 F2P00734 622 aa25.23■■□□□ 1.63
ACTB-203ENST00000417101 CCDC85BQ15834 202 aaPredicted RBP25.23■■□□□ 1.63
ACTB-203ENST00000417101 KIAA0753Q2KHM9 967 aa25.23■■□□□ 1.63
ACTB-203ENST00000417101 CELF3Q5SZQ8 465 aaKnown RBP25.23■■□□□ 1.63
ACTB-203ENST00000417101 SPATA33Q96N06 139 aa25.23■■□□□ 1.63
ACTB-203ENST00000417101 SLC9A7Q96T83 725 aa25.23■■□□□ 1.63
ACTB-203ENST00000417101 TANC1Q9C0D5 1861 aa25.22■■□□□ 1.63
ACTB-203ENST00000417101 HAS3O00219 553 aa25.22■■□□□ 1.63
ACTB-203ENST00000417101 SELPP16109 830 aa25.22■■□□□ 1.63
ACTB-203ENST00000417101 SP2Q02086 613 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms