RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 GRXCR1A8MXD5 290 aa17.53■□□□□ 0.4
UBXN4-203ENST00000416538 PLEKHA8P1O95397 391 aa17.53■□□□□ 0.4
UBXN4-203ENST00000416538 RXRAP19793 462 aa17.53■□□□□ 0.4
UBXN4-203ENST00000416538 CCL23P55773 120 aa17.53■□□□□ 0.4
UBXN4-203ENST00000416538 SART3Q15020 963 aaKnown RBP17.53■□□□□ 0.4
UBXN4-203ENST00000416538 NBPF20Q3BBV1 942 aa17.53■□□□□ 0.4
UBXN4-203ENST00000416538 ARHGEF16Q5VV41 709 aa17.53■□□□□ 0.4
UBXN4-203ENST00000416538 ZNF365Q70YC5 407 aa17.53■□□□□ 0.4
UBXN4-203ENST00000416538 KAT2BQ92831 832 aa17.53■□□□□ 0.4
UBXN4-203ENST00000416538 GPKOWQ92917 476 aaPredicted RBP eCLIP17.53■□□□□ 0.4
UBXN4-203ENST00000416538 SCLYQ96I15 445 aa17.53■□□□□ 0.4
UBXN4-203ENST00000416538 IWS1Q96ST2 819 aa17.53■□□□□ 0.4
UBXN4-203ENST00000416538 LRRC2Q9BYS8 371 aa17.53■□□□□ 0.4
UBXN4-203ENST00000416538 ANO2Q9NQ90 1003 aa17.53■□□□□ 0.4
UBXN4-203ENST00000416538 CXXC1Q9P0U4 656 aaPredicted RBP17.53■□□□□ 0.4
UBXN4-203ENST00000416538 FRMPD4Q14CM0 1322 aa17.52■□□□□ 0.4
UBXN4-203ENST00000416538 DDAH1O94760 285 aa17.52■□□□□ 0.4
UBXN4-203ENST00000416538 PGM5Q15124 567 aa17.52■□□□□ 0.4
UBXN4-203ENST00000416538 STXBP2Q15833 593 aa17.52■□□□□ 0.4
UBXN4-203ENST00000416538 CATIPQ7Z7H3 387 aa17.52■□□□□ 0.4
UBXN4-203ENST00000416538 TMEM199Q8N511 208 aa17.52■□□□□ 0.4
UBXN4-203ENST00000416538 IL23AQ9NPF7 189 aa17.52■□□□□ 0.4
UBXN4-203ENST00000416538 DDX41Q9UJV9 622 aaKnown RBP17.52■□□□□ 0.4
UBXN4-203ENST00000416538 PNMA6FA0A0J9YX94 578 aa17.51■□□□□ 0.39
UBXN4-203ENST00000416538 B4DLN1 442 aa17.51■□□□□ 0.39
UBXN4-203ENST00000416538 GH1P01241 217 aa17.51■□□□□ 0.39
UBXN4-203ENST00000416538 DNAJB2P25686 324 aa17.51■□□□□ 0.39
UBXN4-203ENST00000416538 PBX2P40425 430 aa17.51■□□□□ 0.39
UBXN4-203ENST00000416538 MRPL12P52815 198 aaKnown RBP17.51■□□□□ 0.39
UBXN4-203ENST00000416538 FAM47CQ5HY64 1035 aa17.51■□□□□ 0.39
UBXN4-203ENST00000416538 CMTR1Q8N1G2 835 aaKnown RBP17.51■□□□□ 0.39
UBXN4-203ENST00000416538 CDX2Q99626 313 aaPredicted RBP17.51■□□□□ 0.39
UBXN4-203ENST00000416538 SPZ1Q9BXG8 430 aa17.51■□□□□ 0.39
UBXN4-203ENST00000416538 SEMA6BQ9H3T3 888 aa17.51■□□□□ 0.39
UBXN4-203ENST00000416538 SORBS3O60504 671 aa17.5■□□□□ 0.39
UBXN4-203ENST00000416538 EIF3JO75822 258 aaKnown RBP17.5■□□□□ 0.39
UBXN4-203ENST00000416538 MYCLP12524 364 aaPredicted RBP17.5■□□□□ 0.39
UBXN4-203ENST00000416538 PSRC1Q6PGN9 363 aaPredicted RBP17.5■□□□□ 0.39
UBXN4-203ENST00000416538 FCHSD1Q86WN1 690 aa17.5■□□□□ 0.39
UBXN4-203ENST00000416538 SRBD1Q8N5C6 995 aaKnown RBP17.5■□□□□ 0.39
UBXN4-203ENST00000416538 SEZ6LQ9BYH1 1024 aa17.5■□□□□ 0.39
UBXN4-203ENST00000416538 BCAS3Q9H6U6 928 aa17.5■□□□□ 0.39
UBXN4-203ENST00000416538 CHD9Q3L8U1 2897 aa17.5■□□□□ 0.39
UBXN4-203ENST00000416538 SIP14410 1827 aa17.49■□□□□ 0.39
UBXN4-203ENST00000416538 ZNF286BP0CG31 522 aa17.49■□□□□ 0.39
UBXN4-203ENST00000416538 UBA1P22314 1058 aaKnown RBP17.49■□□□□ 0.39
UBXN4-203ENST00000416538 MCM5P33992 734 aa17.49■□□□□ 0.39
UBXN4-203ENST00000416538 SP2Q02086 613 aa17.49■□□□□ 0.39
UBXN4-203ENST00000416538 NFRKBQ6P4R8 1299 aa17.49■□□□□ 0.39
UBXN4-203ENST00000416538 CASC1Q6TDU7 716 aa17.49■□□□□ 0.39
UBXN4-203ENST00000416538 VSIG10LQ86VR7 867 aa17.49■□□□□ 0.39
UBXN4-203ENST00000416538 RASEFQ8IZ41 740 aa17.49■□□□□ 0.39
UBXN4-203ENST00000416538 MYLIPQ8WY64 445 aa17.49■□□□□ 0.39
UBXN4-203ENST00000416538 HERVK_113Q902F9 699 aa17.49■□□□□ 0.39
UBXN4-203ENST00000416538 EMID1Q96A84 441 aaPredicted RBP17.49■□□□□ 0.39
UBXN4-203ENST00000416538 TCEANC2Q96MN5 208 aa17.49■□□□□ 0.39
UBXN4-203ENST00000416538 MAP3K14Q99558 947 aa17.49■□□□□ 0.39
UBXN4-203ENST00000416538 MTA3Q9BTC8 594 aa17.49■□□□□ 0.39
UBXN4-203ENST00000416538 PBX4Q9BYU1 374 aa17.49■□□□□ 0.39
UBXN4-203ENST00000416538 MRVI1Q9Y6F6 885 aa17.49■□□□□ 0.39
UBXN4-203ENST00000416538 UNC80Q8N2C7 3258 aa17.48■□□□□ 0.39
UBXN4-203ENST00000416538 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.48■□□□□ 0.39
UBXN4-203ENST00000416538 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.48■□□□□ 0.39
UBXN4-203ENST00000416538 GCOM1H8Y6P7 765 aaPredicted RBP17.48■□□□□ 0.39
UBXN4-203ENST00000416538 POLR2MP0CAP2 368 aa17.48■□□□□ 0.39
UBXN4-203ENST00000416538 HOXD8P13378 290 aaPredicted RBP17.48■□□□□ 0.39
UBXN4-203ENST00000416538 MRPS9P82933 396 aaKnown RBP17.48■□□□□ 0.39
UBXN4-203ENST00000416538 SEMA3FQ13275 785 aa17.48■□□□□ 0.39
UBXN4-203ENST00000416538 GDF6Q6KF10 455 aaPredicted RBP17.48■□□□□ 0.39
UBXN4-203ENST00000416538 OTOP2Q7RTS6 562 aa17.48■□□□□ 0.39
UBXN4-203ENST00000416538 CTCFLQ8NI51 663 aaPredicted RBP17.48■□□□□ 0.39
UBXN4-203ENST00000416538 DHX38Q92620 1227 aaKnown RBP17.48■□□□□ 0.39
UBXN4-203ENST00000416538 TMEM87BQ96K49 555 aa17.48■□□□□ 0.39
UBXN4-203ENST00000416538 MAP3K20Q9NYL2 800 aaKnown RBP17.48■□□□□ 0.39
UBXN4-203ENST00000416538 CUL9Q8IWT3 2517 aa17.47■□□□□ 0.39
UBXN4-203ENST00000416538 hCG_1642624A0A1W2PR95 340 aa17.47■□□□□ 0.39
UBXN4-203ENST00000416538 KPNA6O60684 536 aa17.47■□□□□ 0.39
UBXN4-203ENST00000416538 LIFRP42702 1097 aa17.47■□□□□ 0.39
UBXN4-203ENST00000416538 CHMP4BP1P59074 171 aa17.47■□□□□ 0.39
UBXN4-203ENST00000416538 HIC1Q14526 733 aa17.47■□□□□ 0.39
UBXN4-203ENST00000416538 ADCK5Q3MIX3 580 aa17.47■□□□□ 0.39
UBXN4-203ENST00000416538 HSDL1Q3SXM5 330 aa17.47■□□□□ 0.39
UBXN4-203ENST00000416538 BRDTQ58F21 947 aaPredicted RBP17.47■□□□□ 0.39
UBXN4-203ENST00000416538 SAMD3Q8N6K7 520 aa17.47■□□□□ 0.39
UBXN4-203ENST00000416538 TELO2Q9Y4R8 837 aa17.47■□□□□ 0.39
UBXN4-203ENST00000416538 MICAL3Q7RTP6 2002 aa17.47■□□□□ 0.39
UBXN4-203ENST00000416538 PRUNE2Q8WUY3 3088 aa17.46■□□□□ 0.39
UBXN4-203ENST00000416538 CHD7Q9P2D1 2997 aa17.46■□□□□ 0.39
UBXN4-203ENST00000416538 COL4A4P53420 1690 aaPredicted RBP17.46■□□□□ 0.39
UBXN4-203ENST00000416538 TMEM265A0A087WTH1 108 aa17.46■□□□□ 0.39
UBXN4-203ENST00000416538 HAS3O00219 553 aa17.46■□□□□ 0.39
UBXN4-203ENST00000416538 MEIS2O14770 477 aa17.46■□□□□ 0.39
UBXN4-203ENST00000416538 CDC45O75419 566 aa17.46■□□□□ 0.39
UBXN4-203ENST00000416538 F2P00734 622 aa17.46■□□□□ 0.39
UBXN4-203ENST00000416538 CCND2P30279 289 aa17.46■□□□□ 0.39
UBXN4-203ENST00000416538 GRIN2CQ14957 1233 aa17.46■□□□□ 0.39
UBXN4-203ENST00000416538 MYSM1Q5VVJ2 828 aa17.46■□□□□ 0.39
UBXN4-203ENST00000416538 USP17L6PQ6QN14 398 aa17.46■□□□□ 0.39
UBXN4-203ENST00000416538 NFXL1Q6ZNB6 911 aa17.46■□□□□ 0.39
UBXN4-203ENST00000416538 SGMS1Q86VZ5 419 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms