RNA–Protein interactions for RNA: ENST00000416204.1

LINC01238-201, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 590 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-201ENST00000416204 TRIP12Q14669 1992 aaPredicted RBP11.04□□□□□ -0.64
LINC01238-201ENST00000416204 NKRFO15226 690 aaKnown RBP eCLIP11.03□□□□□ -0.64
LINC01238-201ENST00000416204 UPP2O95045 317 aa11.03□□□□□ -0.64
LINC01238-201ENST00000416204 CXCL10P02778 98 aa11.03□□□□□ -0.64
LINC01238-201ENST00000416204 ZFYP08048 801 aaPredicted RBP11.03□□□□□ -0.64
LINC01238-201ENST00000416204 EDNRBP24530 442 aa11.03□□□□□ -0.64
LINC01238-201ENST00000416204 ARHGAP1Q07960 439 aa11.03□□□□□ -0.64
LINC01238-201ENST00000416204 IKBKEQ14164 716 aa11.03□□□□□ -0.64
LINC01238-201ENST00000416204 HIC1Q14526 733 aa11.03□□□□□ -0.64
LINC01238-201ENST00000416204 C20orf194Q5TEA3 1177 aa11.03□□□□□ -0.64
LINC01238-201ENST00000416204 VPS53Q5VIR6 699 aa11.03□□□□□ -0.64
LINC01238-201ENST00000416204 TRAF7Q6Q0C0 670 aa11.03□□□□□ -0.64
LINC01238-201ENST00000416204 C7orf31Q8N865 590 aa11.03□□□□□ -0.64
LINC01238-201ENST00000416204 OTUD7AQ8TE49 926 aaPredicted RBP11.03□□□□□ -0.64
LINC01238-201ENST00000416204 SNX27Q96L92 541 aa11.03□□□□□ -0.64
LINC01238-201ENST00000416204 TMEM47Q9BQJ4 181 aa11.03□□□□□ -0.64
LINC01238-201ENST00000416204 FSD1Q9BTV5 496 aa11.03□□□□□ -0.64
LINC01238-201ENST00000416204 DDX19BQ9UMR2 479 aa11.03□□□□□ -0.64
LINC01238-201ENST00000416204 CFAP54Q96N23 3096 aa11.03□□□□□ -0.64
LINC01238-201ENST00000416204 ABHD14A-ACY1A0A1B0GW23 586 aa11.02□□□□□ -0.65
LINC01238-201ENST00000416204 GOLGA8HP0CJ92 632 aa11.02□□□□□ -0.65
LINC01238-201ENST00000416204 PSEN2P49810 448 aa11.02□□□□□ -0.65
LINC01238-201ENST00000416204 ZP2Q05996 745 aa11.02□□□□□ -0.65
LINC01238-201ENST00000416204 EPC2Q52LR7 807 aa11.02□□□□□ -0.65
LINC01238-201ENST00000416204 CCDC62Q6P9F0 684 aa11.02□□□□□ -0.65
LINC01238-201ENST00000416204 BANK1Q8NDB2 785 aa11.02□□□□□ -0.65
LINC01238-201ENST00000416204 NEK9Q8TD19 979 aa11.02□□□□□ -0.65
LINC01238-201ENST00000416204 MRPL38Q96DV4 380 aaKnown RBP11.02□□□□□ -0.65
LINC01238-201ENST00000416204 GPATCH3Q96I76 525 aa11.02□□□□□ -0.65
LINC01238-201ENST00000416204 OSBPL7Q9BZF2 842 aa11.02□□□□□ -0.65
LINC01238-201ENST00000416204 CLDND1Q9NY35 253 aa11.02□□□□□ -0.65
LINC01238-201ENST00000416204 GTF2IRD1Q9UHL9 959 aa11.02□□□□□ -0.65
LINC01238-201ENST00000416204 MUTYHQ9UIF7 546 aa11.02□□□□□ -0.65
LINC01238-201ENST00000416204 POTEB3A0JP26 581 aa11.01□□□□□ -0.65
LINC01238-201ENST00000416204 GH1P01241 217 aa11.01□□□□□ -0.65
LINC01238-201ENST00000416204 THPOP40225 353 aa11.01□□□□□ -0.65
LINC01238-201ENST00000416204 GPM6BQ13491 265 aa11.01□□□□□ -0.65
LINC01238-201ENST00000416204 MFSD10Q14728 455 aa11.01□□□□□ -0.65
LINC01238-201ENST00000416204 KIAA0753Q2KHM9 967 aa11.01□□□□□ -0.65
LINC01238-201ENST00000416204 TRIM71Q2Q1W2 868 aaKnown RBP11.01□□□□□ -0.65
LINC01238-201ENST00000416204 ZMYM1Q5SVZ6 1142 aa11.01□□□□□ -0.65
LINC01238-201ENST00000416204 POTEBQ6S5H4 581 aa11.01□□□□□ -0.65
LINC01238-201ENST00000416204 BTNL9Q6UXG8 535 aa11.01□□□□□ -0.65
LINC01238-201ENST00000416204 DBF4BQ8NFT6 615 aa11.01□□□□□ -0.65
LINC01238-201ENST00000416204 TAAR1Q96RJ0 339 aa11.01□□□□□ -0.65
LINC01238-201ENST00000416204 UBA5Q9GZZ9 404 aa11.01□□□□□ -0.65
LINC01238-201ENST00000416204 COL20A1Q9P218 1284 aa11.01□□□□□ -0.65
LINC01238-201ENST00000416204 INSL6Q9Y581 213 aa11.01□□□□□ -0.65
LINC01238-201ENST00000416204 SIP14410 1827 aa11□□□□□ -0.65
LINC01238-201ENST00000416204 LGR5O75473 907 aa11□□□□□ -0.65
LINC01238-201ENST00000416204 AMHP03971 560 aa11□□□□□ -0.65
LINC01238-201ENST00000416204 CTSHP09668 335 aa11□□□□□ -0.65
LINC01238-201ENST00000416204 PDHBP11177 359 aa11□□□□□ -0.65
LINC01238-201ENST00000416204 EIF2AK2P19525 551 aaKnown RBP11□□□□□ -0.65
LINC01238-201ENST00000416204 CASTP20810 708 aaKnown RBP11□□□□□ -0.65
LINC01238-201ENST00000416204 IRS1P35568 1242 aa11□□□□□ -0.65
LINC01238-201ENST00000416204 DLX2Q07687 328 aaPredicted RBP11□□□□□ -0.65
LINC01238-201ENST00000416204 PTPROQ16827 1216 aa11□□□□□ -0.65
LINC01238-201ENST00000416204 IER5LQ5T953 404 aa11□□□□□ -0.65
LINC01238-201ENST00000416204 RPAINQ86UA6 219 aa11□□□□□ -0.65
LINC01238-201ENST00000416204 SESTD1Q86VW0 696 aa11□□□□□ -0.65
LINC01238-201ENST00000416204 DHX37Q8IY37 1157 aaKnown RBP11□□□□□ -0.65
LINC01238-201ENST00000416204 ZFP91Q96JP5 570 aaPredicted RBP11□□□□□ -0.65
LINC01238-201ENST00000416204 YME1L1Q96TA2 773 aa11□□□□□ -0.65
LINC01238-201ENST00000416204 MPHOSPH6Q99547 160 aaKnown RBP11□□□□□ -0.65
LINC01238-201ENST00000416204 LOC102724159A0A0B4J2E5 919 aa10.99□□□□□ -0.65
LINC01238-201ENST00000416204 TOP1P11387 765 aaKnown RBP10.99□□□□□ -0.65
LINC01238-201ENST00000416204 MS4A1P11836 297 aa10.99□□□□□ -0.65
LINC01238-201ENST00000416204 GTF2F1P35269 517 aaKnown RBP eCLIP10.99□□□□□ -0.65
LINC01238-201ENST00000416204 HAND2P61296 217 aa10.99□□□□□ -0.65
LINC01238-201ENST00000416204 RBL2Q08999 1139 aa10.99□□□□□ -0.65
LINC01238-201ENST00000416204 ZNF543Q08ER8 600 aa10.99□□□□□ -0.65
LINC01238-201ENST00000416204 PTK7Q13308 1070 aa10.99□□□□□ -0.65
LINC01238-201ENST00000416204 PWP2Q15269 919 aaKnown RBP10.99□□□□□ -0.65
LINC01238-201ENST00000416204 DGKDQ16760 1214 aa10.99□□□□□ -0.65
LINC01238-201ENST00000416204 TIGD5Q53EQ6 642 aa10.99□□□□□ -0.65
LINC01238-201ENST00000416204 PPP4R3BQ5MIZ7 849 aa10.99□□□□□ -0.65
LINC01238-201ENST00000416204 ADHFE1Q8IWW8 467 aa10.99□□□□□ -0.65
LINC01238-201ENST00000416204 TMEM192Q8IY95 271 aa10.99□□□□□ -0.65
LINC01238-201ENST00000416204 PRSS33Q8NF86 280 aa10.99□□□□□ -0.65
LINC01238-201ENST00000416204 DNERQ8NFT8 737 aa10.99□□□□□ -0.65
LINC01238-201ENST00000416204 PABPC5Q96DU9 382 aaKnown RBP10.99□□□□□ -0.65
LINC01238-201ENST00000416204 ZKSCAN3Q9BRR0 538 aa10.99□□□□□ -0.65
LINC01238-201ENST00000416204 IGFLR1Q9H665 355 aa10.99□□□□□ -0.65
LINC01238-201ENST00000416204 C19orf67A6NJJ6 358 aa10.98□□□□□ -0.65
LINC01238-201ENST00000416204 RSPH10B2B2RC85 870 aa10.98□□□□□ -0.65
LINC01238-201ENST00000416204 EFCAB14O75071 495 aa10.98□□□□□ -0.65
LINC01238-201ENST00000416204 RSPH10BP0C881 870 aa10.98□□□□□ -0.65
LINC01238-201ENST00000416204 LTBRP36941 435 aa10.98□□□□□ -0.65
LINC01238-201ENST00000416204 NOVP48745 357 aa10.98□□□□□ -0.65
LINC01238-201ENST00000416204 HTRA4P83105 476 aaPredicted RBP10.98□□□□□ -0.65
LINC01238-201ENST00000416204 PUS10Q3MIT2 529 aaKnown RBP10.98□□□□□ -0.65
LINC01238-201ENST00000416204 PI4K2BQ8TCG2 481 aa10.98□□□□□ -0.65
LINC01238-201ENST00000416204 SYTL5Q8TDW5 730 aaPredicted RBP10.98□□□□□ -0.65
LINC01238-201ENST00000416204 NSUN3Q9H649 340 aaKnown RBP10.98□□□□□ -0.65
LINC01238-201ENST00000416204 FAM86C1Q9NVL1 165 aa10.98□□□□□ -0.65
LINC01238-201ENST00000416204 DDX41Q9UJV9 622 aaKnown RBP10.98□□□□□ -0.65
LINC01238-201ENST00000416204 MRVI1Q9Y6F6 885 aa10.98□□□□□ -0.65
LINC01238-201ENST00000416204 MYO15AQ9UKN7 3530 aa10.97□□□□□ -0.65
LINC01238-201ENST00000416204 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms