RNA–Protein interactions for RNA: ENST00000415825.2

TRAPPC13-203, Transcript of trafficking protein particle complex 13, humanhuman

TSL 1 (best)

Gene TRAPPC13, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-203ENST00000415825 MIB1Q86YT6 1006 aa5.35□□□□□ -1.55
TRAPPC13-203ENST00000415825 KIAA0825Q8IV33 1275 aa5.35□□□□□ -1.55
TRAPPC13-203ENST00000415825 BTG4Q9NY30 223 aa5.35□□□□□ -1.55
TRAPPC13-203ENST00000415825 MARCH2Q9P0N8 246 aa5.35□□□□□ -1.55
TRAPPC13-203ENST00000415825 ZNRF3Q9ULT6 936 aa5.35□□□□□ -1.55
TRAPPC13-203ENST00000415825 SUGT1Q9Y2Z0 365 aa5.35□□□□□ -1.55
TRAPPC13-203ENST00000415825 ZDHHC9Q9Y397 364 aa5.35□□□□□ -1.55
TRAPPC13-203ENST00000415825 SIT1Q9Y3P8 196 aa5.35□□□□□ -1.55
TRAPPC13-203ENST00000415825 SLC12A7Q9Y666 1083 aa5.35□□□□□ -1.55
TRAPPC13-203ENST00000415825 NPIPB8E9PQR5 432 aa5.34□□□□□ -1.55
TRAPPC13-203ENST00000415825 GPR42O15529 346 aa5.34□□□□□ -1.55
TRAPPC13-203ENST00000415825 B4GALT4O60513 344 aa5.34□□□□□ -1.55
TRAPPC13-203ENST00000415825 ACRP10323 421 aa5.34□□□□□ -1.55
TRAPPC13-203ENST00000415825 MCM7P33993 719 aa5.34□□□□□ -1.55
TRAPPC13-203ENST00000415825 IL13P35225 146 aa5.34□□□□□ -1.55
TRAPPC13-203ENST00000415825 PPFIBP1Q86W92 1011 aa5.34□□□□□ -1.55
TRAPPC13-203ENST00000415825 FAM126BQ8IXS8 530 aa5.34□□□□□ -1.55
TRAPPC13-203ENST00000415825 FAM26EQ8N5C1 309 aa5.34□□□□□ -1.55
TRAPPC13-203ENST00000415825 DNERQ8NFT8 737 aa5.34□□□□□ -1.55
TRAPPC13-203ENST00000415825 LTBP3Q9NS15 1303 aa5.33□□□□□ -1.56
TRAPPC13-203ENST00000415825 C7orf72A4D263 438 aa5.33□□□□□ -1.56
TRAPPC13-203ENST00000415825 ZNF28P17035 718 aa5.33□□□□□ -1.56
TRAPPC13-203ENST00000415825 GUCY2CP25092 1073 aa5.33□□□□□ -1.56
TRAPPC13-203ENST00000415825 CHRNA2Q15822 529 aa5.33□□□□□ -1.56
TRAPPC13-203ENST00000415825 ZNF568Q3ZCX4 644 aa5.33□□□□□ -1.56
TRAPPC13-203ENST00000415825 NRN1LQ496H8 165 aa5.33□□□□□ -1.56
TRAPPC13-203ENST00000415825 ZNF326Q5BKZ1 582 aaKnown RBP5.33□□□□□ -1.56
TRAPPC13-203ENST00000415825 KLHL36Q8N4N3 616 aa5.33□□□□□ -1.56
TRAPPC13-203ENST00000415825 CRBNQ96SW2 442 aa5.33□□□□□ -1.56
TRAPPC13-203ENST00000415825 SPON2Q9BUD6 331 aa5.33□□□□□ -1.56
TRAPPC13-203ENST00000415825 WDR26Q9H7D7 661 aa5.33□□□□□ -1.56
TRAPPC13-203ENST00000415825 FBLN5Q9UBX5 448 aa5.33□□□□□ -1.56
TRAPPC13-203ENST00000415825 CROTQ9UKG9 612 aa5.33□□□□□ -1.56
TRAPPC13-203ENST00000415825 PATE3B3GLJ2 98 aa5.32□□□□□ -1.56
TRAPPC13-203ENST00000415825 VAMP4O75379 141 aa5.32□□□□□ -1.56
TRAPPC13-203ENST00000415825 ZNF202O95125 648 aa5.32□□□□□ -1.56
TRAPPC13-203ENST00000415825 GNPTABQ3T906 1256 aa5.32□□□□□ -1.56
TRAPPC13-203ENST00000415825 PRR31Q5SQ13 230 aa5.32□□□□□ -1.56
TRAPPC13-203ENST00000415825 UNC5AQ6ZN44 842 aa5.32□□□□□ -1.56
TRAPPC13-203ENST00000415825 IFNL2Q8IZJ0 200 aa5.32□□□□□ -1.56
TRAPPC13-203ENST00000415825 CRACR2BQ8N4Y2 399 aaPredicted RBP5.32□□□□□ -1.56
TRAPPC13-203ENST00000415825 CHFRQ96EP1 664 aa5.32□□□□□ -1.56
TRAPPC13-203ENST00000415825 CEP89Q96ST8 783 aa5.32□□□□□ -1.56
TRAPPC13-203ENST00000415825 HAUS7Q99871 368 aa5.32□□□□□ -1.56
TRAPPC13-203ENST00000415825 C22orf46C9J442 243 aa5.31□□□□□ -1.56
TRAPPC13-203ENST00000415825 STAT5AP42229 794 aa5.31□□□□□ -1.56
TRAPPC13-203ENST00000415825 SLC6A11P48066 632 aa5.31□□□□□ -1.56
TRAPPC13-203ENST00000415825 GRB10Q13322 594 aa5.31□□□□□ -1.56
TRAPPC13-203ENST00000415825 FOXE3Q13461 319 aa5.31□□□□□ -1.56
TRAPPC13-203ENST00000415825 MROH9Q5TGP6 573 aa5.31□□□□□ -1.56
TRAPPC13-203ENST00000415825 TRMT10BQ6PF06 316 aaKnown RBP5.31□□□□□ -1.56
TRAPPC13-203ENST00000415825 GIMAP8Q8ND71 665 aaPredicted RBP5.31□□□□□ -1.56
TRAPPC13-203ENST00000415825 YTHDC1Q96MU7 727 aaKnown RBP5.31□□□□□ -1.56
TRAPPC13-203ENST00000415825 TMEM209Q96SK2 561 aa5.31□□□□□ -1.56
TRAPPC13-203ENST00000415825 ZNF214Q9UL59 606 aaPredicted RBP5.31□□□□□ -1.56
TRAPPC13-203ENST00000415825 COA3Q9Y2R0 106 aaPredicted RBP5.31□□□□□ -1.56
TRAPPC13-203ENST00000415825 MYO1BO43795 1136 aa5.3□□□□□ -1.56
TRAPPC13-203ENST00000415825 THBDP07204 575 aa5.3□□□□□ -1.56
TRAPPC13-203ENST00000415825 TOE1Q96GM8 510 aaKnown RBP5.3□□□□□ -1.56
TRAPPC13-203ENST00000415825 ZSWIM3Q96MP5 696 aa5.3□□□□□ -1.56
TRAPPC13-203ENST00000415825 ADOQ96SZ5 270 aa5.3□□□□□ -1.56
TRAPPC13-203ENST00000415825 SYT3Q9BQG1 590 aa5.3□□□□□ -1.56
TRAPPC13-203ENST00000415825 SGSM2O43147 1006 aa5.29□□□□□ -1.56
TRAPPC13-203ENST00000415825 NFATC3Q12968 1075 aa5.29□□□□□ -1.56
TRAPPC13-203ENST00000415825 PKN3Q6P5Z2 889 aa5.29□□□□□ -1.56
TRAPPC13-203ENST00000415825 POMZP3Q6PJE2 187 aa5.29□□□□□ -1.56
TRAPPC13-203ENST00000415825 RALYLQ86SE5 291 aaKnown RBP5.29□□□□□ -1.56
TRAPPC13-203ENST00000415825 ZNF575Q86XF7 245 aa5.29□□□□□ -1.56
TRAPPC13-203ENST00000415825 TEX2Q8IWB9 1127 aa5.29□□□□□ -1.56
TRAPPC13-203ENST00000415825 TRMT2BQ96GJ1 504 aaKnown RBP5.29□□□□□ -1.56
TRAPPC13-203ENST00000415825 PHAXQ9H814 394 aaKnown RBP5.29□□□□□ -1.56
TRAPPC13-203ENST00000415825 CGGBP1Q9UFW8 167 aaPredicted RBP5.29□□□□□ -1.56
TRAPPC13-203ENST00000415825 PPP1R11O60927 126 aaPredicted RBP5.28□□□□□ -1.56
TRAPPC13-203ENST00000415825 GTF2A2P52657 109 aa5.28□□□□□ -1.56
TRAPPC13-203ENST00000415825 INHBCP55103 352 aa5.28□□□□□ -1.56
TRAPPC13-203ENST00000415825 RPL11P62913 178 aaKnown RBP5.28□□□□□ -1.56
TRAPPC13-203ENST00000415825 SLC7A5Q01650 507 aa5.28□□□□□ -1.56
TRAPPC13-203ENST00000415825 DPTQ07507 201 aa5.28□□□□□ -1.56
TRAPPC13-203ENST00000415825 R3HDM1Q15032 1099 aaKnown RBP5.28□□□□□ -1.56
TRAPPC13-203ENST00000415825 IQCEQ6IPM2 695 aa5.28□□□□□ -1.56
TRAPPC13-203ENST00000415825 RNF207Q6ZRF8 634 aa5.28□□□□□ -1.56
TRAPPC13-203ENST00000415825 DNAJC10Q8IXB1 793 aa5.28□□□□□ -1.56
TRAPPC13-203ENST00000415825 RBBP8NLQ8NC74 664 aaPredicted RBP5.28□□□□□ -1.56
TRAPPC13-203ENST00000415825 Q8TCH9 128 aa5.28□□□□□ -1.56
TRAPPC13-203ENST00000415825 PLEKHO2Q8TD55 490 aa5.28□□□□□ -1.56
TRAPPC13-203ENST00000415825 CRAMP1Q96RY5 1269 aa5.28□□□□□ -1.56
TRAPPC13-203ENST00000415825 MMP19Q99542 508 aa5.28□□□□□ -1.56
TRAPPC13-203ENST00000415825 TRIM8Q9BZR9 551 aa5.28□□□□□ -1.56
TRAPPC13-203ENST00000415825 SEC61A2Q9H9S3 476 aa5.28□□□□□ -1.56
TRAPPC13-203ENST00000415825 CLEC1BQ9P126 229 aa5.28□□□□□ -1.56
TRAPPC13-203ENST00000415825 CBFA2T2O43439 604 aa5.27□□□□□ -1.57
TRAPPC13-203ENST00000415825 NAT2P11245 290 aa5.27□□□□□ -1.57
TRAPPC13-203ENST00000415825 TGM1P22735 817 aa5.27□□□□□ -1.57
TRAPPC13-203ENST00000415825 TAGLNQ01995 201 aaKnown RBP5.27□□□□□ -1.57
TRAPPC13-203ENST00000415825 ADAM9Q13443 819 aa5.27□□□□□ -1.57
TRAPPC13-203ENST00000415825 LSM12Q3MHD2 195 aaKnown RBP5.27□□□□□ -1.57
TRAPPC13-203ENST00000415825 MIIPQ5JXC2 388 aa5.27□□□□□ -1.57
TRAPPC13-203ENST00000415825 RCC1LQ96I51 464 aaKnown RBP5.27□□□□□ -1.57
TRAPPC13-203ENST00000415825 FGD4Q96M96 766 aa5.27□□□□□ -1.57
TRAPPC13-203ENST00000415825 LMF1Q96S06 567 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms