RNA–Protein interactions for RNA: ENST00000415461.2

CTTN-205, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 1,021 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-205ENST00000415461 DEFB123Q8N688 67 aa23.28■■□□□ 1.32
CTTN-205ENST00000415461 RNPC3Q96LT9 517 aaKnown RBP23.28■■□□□ 1.32
CTTN-205ENST00000415461 SEC63Q9UGP8 760 aaKnown RBP23.28■■□□□ 1.32
CTTN-205ENST00000415461 DDX41Q9UJV9 622 aaKnown RBP23.28■■□□□ 1.32
CTTN-205ENST00000415461 UMODL1Q5DID0 1318 aa23.28■■□□□ 1.32
CTTN-205ENST00000415461 RGS20O76081 388 aa23.27■■□□□ 1.32
CTTN-205ENST00000415461 CSF2RAP15509 400 aa23.27■■□□□ 1.32
CTTN-205ENST00000415461 SMARCA1P28370 1054 aa23.27■■□□□ 1.32
CTTN-205ENST00000415461 TSGA10IPQ3SY00 556 aa23.27■■□□□ 1.32
CTTN-205ENST00000415461 TMTC3Q6ZXV5 915 aa23.27■■□□□ 1.32
CTTN-205ENST00000415461 HIPK3Q9H422 1215 aa23.27■■□□□ 1.32
CTTN-205ENST00000415461 TRMT13Q9NUP7 481 aaKnown RBP23.27■■□□□ 1.32
CTTN-205ENST00000415461 MMP3P08254 477 aa23.26■■□□□ 1.31
CTTN-205ENST00000415461 EXOSC10Q01780 885 aaKnown RBP23.26■■□□□ 1.31
CTTN-205ENST00000415461 NBPF20Q3BBV1 942 aa23.26■■□□□ 1.31
CTTN-205ENST00000415461 VSIG10LQ86VR7 867 aa23.26■■□□□ 1.31
CTTN-205ENST00000415461 ZFP91Q96JP5 570 aaPredicted RBP23.26■■□□□ 1.31
CTTN-205ENST00000415461 NOC4LQ9BVI4 516 aaKnown RBP23.26■■□□□ 1.31
CTTN-205ENST00000415461 hCG_1642624A0A1W2PR95 340 aa23.25■■□□□ 1.31
CTTN-205ENST00000415461 KPNA6O60684 536 aa23.25■■□□□ 1.31
CTTN-205ENST00000415461 CCND2P30279 289 aa23.25■■□□□ 1.31
CTTN-205ENST00000415461 FAM47CQ5HY64 1035 aa23.25■■□□□ 1.31
CTTN-205ENST00000415461 APOA5Q6Q788 366 aa23.25■■□□□ 1.31
CTTN-205ENST00000415461 DHX32Q7L7V1 743 aaKnown RBP23.25■■□□□ 1.31
CTTN-205ENST00000415461 CCDC82Q8N4S0 544 aa23.25■■□□□ 1.31
CTTN-205ENST00000415461 TMEM199Q8N511 208 aa23.25■■□□□ 1.31
CTTN-205ENST00000415461 FANCBQ8NB91 859 aa23.25■■□□□ 1.31
CTTN-205ENST00000415461 FRMPD4Q14CM0 1322 aa23.25■■□□□ 1.31
CTTN-205ENST00000415461 CHMP4BP1P59074 171 aa23.24■■□□□ 1.31
CTTN-205ENST00000415461 PPIGQ13427 754 aaKnown RBP eCLIP23.24■■□□□ 1.311e-8■■□□□ 12.8
CTTN-205ENST00000415461 KRT32Q14532 448 aa23.24■■□□□ 1.31
CTTN-205ENST00000415461 C16orf59Q7L2K0 433 aa23.24■■□□□ 1.31
CTTN-205ENST00000415461 GPKOWQ92917 476 aaPredicted RBP eCLIP23.24■■□□□ 1.312e-6■□□□□ 10.3
CTTN-205ENST00000415461 EMID1Q96A84 441 aaPredicted RBP23.24■■□□□ 1.31
CTTN-205ENST00000415461 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.24■■□□□ 1.312e-8■□□□□ 10.7
CTTN-205ENST00000415461 BRPF3Q9ULD4 1205 aa23.24■■□□□ 1.31
CTTN-205ENST00000415461 SORBS3O60504 671 aa23.23■■□□□ 1.31
CTTN-205ENST00000415461 ACRP10323 421 aa23.23■■□□□ 1.31
CTTN-205ENST00000415461 CYP2C9P11712 490 aa23.23■■□□□ 1.31
CTTN-205ENST00000415461 CPA1P15085 419 aa23.23■■□□□ 1.31
CTTN-205ENST00000415461 CCL23P55773 120 aa23.23■■□□□ 1.31
CTTN-205ENST00000415461 NFRKBQ6P4R8 1299 aa23.23■■□□□ 1.31
CTTN-205ENST00000415461 USP17L6PQ6QN14 398 aa23.23■■□□□ 1.31
CTTN-205ENST00000415461 SYNE3Q6ZMZ3 975 aa23.23■■□□□ 1.31
CTTN-205ENST00000415461 WNT8AQ9H1J5 351 aa23.23■■□□□ 1.31
CTTN-205ENST00000415461 SCN10AQ9Y5Y9 1956 aa23.23■■□□□ 1.31
CTTN-205ENST00000415461 UBA1P22314 1058 aaKnown RBP23.22■■□□□ 1.31
CTTN-205ENST00000415461 TMEM240Q5SV17 173 aa23.22■■□□□ 1.31
CTTN-205ENST00000415461 SMARCC2Q8TAQ2 1214 aa23.22■■□□□ 1.31
CTTN-205ENST00000415461 KAT2BQ92831 832 aa23.22■■□□□ 1.31
CTTN-205ENST00000415461 CNTNAP5Q8WYK1 1306 aa23.22■■□□□ 1.31
CTTN-205ENST00000415461 KIAA1217Q5T5P2 1943 aa23.21■■□□□ 1.31
CTTN-205ENST00000415461 MEIS2O14770 477 aa23.21■■□□□ 1.31
CTTN-205ENST00000415461 HSPA4P34932 840 aa23.21■■□□□ 1.31
CTTN-205ENST00000415461 MRPS9P82933 396 aaKnown RBP23.21■■□□□ 1.31
CTTN-205ENST00000415461 SMAD3P84022 425 aaKnown RBP23.21■■□□□ 1.31
CTTN-205ENST00000415461 LAMC2Q13753 1193 aa23.21■■□□□ 1.31
CTTN-205ENST00000415461 DGKDQ16760 1214 aa23.21■■□□□ 1.31
CTTN-205ENST00000415461 DHX37Q8IY37 1157 aaKnown RBP23.21■■□□□ 1.31
CTTN-205ENST00000415461 PPTC7Q8NI37 304 aa23.21■■□□□ 1.31
CTTN-205ENST00000415461 KCNB2Q92953 911 aa23.21■■□□□ 1.31
CTTN-205ENST00000415461 CUL5Q93034 780 aa23.21■■□□□ 1.31
CTTN-205ENST00000415461 MTMR10Q9NXD2 777 aa23.21■■□□□ 1.31
CTTN-205ENST00000415461 COL6A3P12111 3177 aa23.21■■□□□ 1.31
CTTN-205ENST00000415461 KLF18A0A0U1RQI7 1052 aa23.2■■□□□ 1.3
CTTN-205ENST00000415461 PIK3CDO00329 1044 aa23.2■■□□□ 1.3
CTTN-205ENST00000415461 ZBTB43O43298 467 aa23.2■■□□□ 1.3
CTTN-205ENST00000415461 GGPS1O95749 300 aa23.2■■□□□ 1.3
CTTN-205ENST00000415461 SUPT20HL2P0C7V6 817 aa23.2■■□□□ 1.3
CTTN-205ENST00000415461 ZNF286BP0CG31 522 aa23.2■■□□□ 1.3
CTTN-205ENST00000415461 CASTP20810 708 aaKnown RBP23.2■■□□□ 1.3
CTTN-205ENST00000415461 SP2Q02086 613 aa23.2■■□□□ 1.3
CTTN-205ENST00000415461 RTN1Q16799 776 aa23.2■■□□□ 1.3
CTTN-205ENST00000415461 MYSM1Q5VVJ2 828 aa23.2■■□□□ 1.3
CTTN-205ENST00000415461 PSRC1Q6PGN9 363 aaPredicted RBP23.2■■□□□ 1.3
CTTN-205ENST00000415461 FAM161BQ96MY7 647 aa23.2■■□□□ 1.3
CTTN-205ENST00000415461 JAKMIP1Q96N16 626 aaKnown RBP23.2■■□□□ 1.3
CTTN-205ENST00000415461 IL23AQ9NPF7 189 aa23.2■■□□□ 1.3
CTTN-205ENST00000415461 RBM28Q9NW13 759 aaKnown RBP23.2■■□□□ 1.3
CTTN-205ENST00000415461 SNX14Q9Y5W7 946 aa23.2■■□□□ 1.3
CTTN-205ENST00000415461 HMGB1P09429 215 aaKnown RBP23.19■■□□□ 1.3
CTTN-205ENST00000415461 CELF3Q5SZQ8 465 aaKnown RBP23.19■■□□□ 1.3
CTTN-205ENST00000415461 ZNF697Q5TEC3 545 aa23.19■■□□□ 1.3
CTTN-205ENST00000415461 FAM109BQ6ICB4 259 aaPredicted RBP23.19■■□□□ 1.3
CTTN-205ENST00000415461 KCNV1Q6PIU1 500 aa23.19■■□□□ 1.3
CTTN-205ENST00000415461 ZNF365Q70YC5 407 aa23.19■■□□□ 1.3
CTTN-205ENST00000415461 HEATR3Q7Z4Q2 680 aa23.19■■□□□ 1.3
CTTN-205ENST00000415461 SCLYQ96I15 445 aa23.19■■□□□ 1.3
CTTN-205ENST00000415461 INPP4AQ96PE3 977 aaPredicted RBP23.19■■□□□ 1.3
CTTN-205ENST00000415461 CDH23Q9H251 3354 aa23.18■■□□□ 1.3
CTTN-205ENST00000415461 GOLGA8AA7E2F4 631 aa23.18■■□□□ 1.3
CTTN-205ENST00000415461 GOLGA8BA8MQT2 603 aa23.18■■□□□ 1.3
CTTN-205ENST00000415461 PTPN11Q06124 597 aaPredicted RBP23.18■■□□□ 1.3
CTTN-205ENST00000415461 UBE2SQ16763 222 aa23.18■■□□□ 1.3
CTTN-205ENST00000415461 HSDL1Q3SXM5 330 aa23.18■■□□□ 1.3
CTTN-205ENST00000415461 SPATA33Q96N06 139 aa23.18■■□□□ 1.3
CTTN-205ENST00000415461 PSTPIP2Q9H939 334 aa23.18■■□□□ 1.3
CTTN-205ENST00000415461 RTEL1Q9NZ71 1219 aa23.18■■□□□ 1.3
CTTN-205ENST00000415461 REC8O95072 547 aa23.17■■□□□ 1.3
CTTN-205ENST00000415461 F2P00734 622 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms