RNA–Protein interactions for RNA: ENST00000414255.1

ZNF440-202, Transcript of zinc finger protein 440, humanhuman

TSL 2

Gene ZNF440, Length 796 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440-202ENST00000414255 C1QL4Q86Z23 238 aa6.3□□□□□ -1.4
ZNF440-202ENST00000414255 CNTROBQ8N137 903 aa6.3□□□□□ -1.4
ZNF440-202ENST00000414255 PI4KAP1Q8N8J0 262 aa6.3□□□□□ -1.4
ZNF440-202ENST00000414255 LTV1Q96GA3 475 aaPredicted RBP6.3□□□□□ -1.4
ZNF440-202ENST00000414255 GPATCH3Q96I76 525 aa6.3□□□□□ -1.4
ZNF440-202ENST00000414255 NSUN3Q9H649 340 aaKnown RBP6.3□□□□□ -1.4
ZNF440-202ENST00000414255 GRPEL1Q9HAV7 217 aa6.3□□□□□ -1.4
ZNF440-202ENST00000414255 KDM6AO15550 1401 aaPredicted RBP6.3□□□□□ -1.4
ZNF440-202ENST00000414255 PKD1L3Q7Z443 1732 aa6.3□□□□□ -1.4
ZNF440-202ENST00000414255 NPHP3Q7Z494 1330 aa6.29□□□□□ -1.4
ZNF440-202ENST00000414255 COL18A1P39060 1754 aa6.29□□□□□ -1.4
ZNF440-202ENST00000414255 HIP1O00291 1037 aa6.29□□□□□ -1.4
ZNF440-202ENST00000414255 SURF6O75683 361 aaKnown RBP6.29□□□□□ -1.4
ZNF440-202ENST00000414255 MBD3O95983 291 aa6.29□□□□□ -1.4
ZNF440-202ENST00000414255 NBPF7P0C2Y1 421 aaPredicted RBP6.29□□□□□ -1.4
ZNF440-202ENST00000414255 GRK4P32298 578 aa6.29□□□□□ -1.4
ZNF440-202ENST00000414255 ABHD4Q8TB40 342 aa6.29□□□□□ -1.4
ZNF440-202ENST00000414255 RUFY2Q8WXA3 655 aa6.29□□□□□ -1.4
ZNF440-202ENST00000414255 UBE2FQ969M7 185 aa6.29□□□□□ -1.4
ZNF440-202ENST00000414255 LRRC59Q96AG4 307 aaKnown RBP6.29□□□□□ -1.4
ZNF440-202ENST00000414255 TMX3Q96JJ7 454 aa6.29□□□□□ -1.4
ZNF440-202ENST00000414255 ORAI2Q96SN7 254 aa6.29□□□□□ -1.4
ZNF440-202ENST00000414255 SETDB2Q96T68 719 aa6.29□□□□□ -1.4
ZNF440-202ENST00000414255 TM6SF1Q9BZW5 370 aa6.29□□□□□ -1.4
ZNF440-202ENST00000414255 EPB41L4BQ9H329 900 aa6.29□□□□□ -1.4
ZNF440-202ENST00000414255 SLAMF8Q9P0V8 285 aa6.29□□□□□ -1.4
ZNF440-202ENST00000414255 WWC3Q9ULE0 1092 aa6.29□□□□□ -1.4
ZNF440-202ENST00000414255 TMEM94Q12767 1356 aa6.29□□□□□ -1.4
ZNF440-202ENST00000414255 CNTNAP4Q9C0A0 1308 aa6.28□□□□□ -1.4
ZNF440-202ENST00000414255 GLI3P10071 1580 aa6.28□□□□□ -1.4
ZNF440-202ENST00000414255 GRM8O00222 908 aa6.28□□□□□ -1.4
ZNF440-202ENST00000414255 TMEM253P0C7T8 217 aa6.28□□□□□ -1.4
ZNF440-202ENST00000414255 ZSCAN22P10073 491 aaPredicted RBP6.28□□□□□ -1.4
ZNF440-202ENST00000414255 NEK4P51957 841 aa6.28□□□□□ -1.4
ZNF440-202ENST00000414255 TNK2Q07912 1038 aa6.28□□□□□ -1.4
ZNF440-202ENST00000414255 ZNF790Q6PG37 636 aa6.28□□□□□ -1.4
ZNF440-202ENST00000414255 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.28□□□□□ -1.4
ZNF440-202ENST00000414255 TTC6Q86TZ1 520 aa6.28□□□□□ -1.4
ZNF440-202ENST00000414255 MRPL41Q8IXM3 137 aaKnown RBP6.28□□□□□ -1.4
ZNF440-202ENST00000414255 CLASRPQ8N2M8 674 aaKnown RBP6.28□□□□□ -1.4
ZNF440-202ENST00000414255 RIN3Q8TB24 985 aa6.28□□□□□ -1.4
ZNF440-202ENST00000414255 RAPGEF4Q8WZA2 1011 aa6.28□□□□□ -1.4
ZNF440-202ENST00000414255 DIRC2Q96SL1 478 aa6.28□□□□□ -1.4
ZNF440-202ENST00000414255 LSG1Q9H089 658 aaKnown RBP6.28□□□□□ -1.4
ZNF440-202ENST00000414255 SLC52A2Q9HAB3 445 aa6.28□□□□□ -1.4
ZNF440-202ENST00000414255 ECHDC1Q9NTX5 307 aa6.28□□□□□ -1.4
ZNF440-202ENST00000414255 LMBRD1Q9NUN5 540 aa6.28□□□□□ -1.4
ZNF440-202ENST00000414255 ZSWIM5Q9P217 1185 aa6.28□□□□□ -1.4
ZNF440-202ENST00000414255 RAPGEFL1Q9UHV5 662 aa6.28□□□□□ -1.4
ZNF440-202ENST00000414255 TMEM59LQ9UK28 342 aa6.28□□□□□ -1.4
ZNF440-202ENST00000414255 JCADQ9P266 1359 aa6.28□□□□□ -1.4
ZNF440-202ENST00000414255 SCN11AQ9UI33 1791 aa6.27□□□□□ -1.41
ZNF440-202ENST00000414255 MEGF6O75095 1541 aa6.27□□□□□ -1.41
ZNF440-202ENST00000414255 KCNQ3O43525 872 aa6.27□□□□□ -1.41
ZNF440-202ENST00000414255 C1QTNF9P0C862 333 aa6.27□□□□□ -1.41
ZNF440-202ENST00000414255 PHKG2P15735 406 aa6.27□□□□□ -1.41
ZNF440-202ENST00000414255 EIF2S2P20042 333 aaKnown RBP6.27□□□□□ -1.41
ZNF440-202ENST00000414255 EIF4BP23588 611 aaKnown RBP6.27□□□□□ -1.41
ZNF440-202ENST00000414255 PDE4BQ07343 736 aa6.27□□□□□ -1.41
ZNF440-202ENST00000414255 HS1BP3Q53T59 392 aa6.27□□□□□ -1.41
ZNF440-202ENST00000414255 SLC6A19Q695T7 634 aa6.27□□□□□ -1.41
ZNF440-202ENST00000414255 LCNL1Q6ZST4 164 aa6.27□□□□□ -1.41
ZNF440-202ENST00000414255 LRP10Q7Z4F1 713 aa6.27□□□□□ -1.41
ZNF440-202ENST00000414255 UNC5CLQ8IV45 518 aa6.27□□□□□ -1.41
ZNF440-202ENST00000414255 IFNL2Q8IZJ0 200 aa6.27□□□□□ -1.41
ZNF440-202ENST00000414255 TMEM87AQ8NBN3 555 aa6.27□□□□□ -1.41
ZNF440-202ENST00000414255 EVI5LQ96CN4 794 aa6.27□□□□□ -1.41
ZNF440-202ENST00000414255 TTC14Q96N46 770 aa6.27□□□□□ -1.41
ZNF440-202ENST00000414255 PPP1R9BQ96SB3 815 aa6.27□□□□□ -1.41
ZNF440-202ENST00000414255 TRIT1Q9H3H1 467 aaKnown RBP6.27□□□□□ -1.41
ZNF440-202ENST00000414255 DCP1AQ9NPI6 582 aaPredicted RBP6.27□□□□□ -1.41
ZNF440-202ENST00000414255 C9orf78Q9NZ63 289 aaPredicted RBP6.27□□□□□ -1.41
ZNF440-202ENST00000414255 MAP3K2Q9Y2U5 619 aa6.27□□□□□ -1.41
ZNF440-202ENST00000414255 ZDHHC9Q9Y397 364 aa6.27□□□□□ -1.41
ZNF440-202ENST00000414255 DDX49Q9Y6V7 483 aaKnown RBP6.27□□□□□ -1.41
ZNF440-202ENST00000414255 WDR33Q9C0J8 1336 aaKnown RBP6.26□□□□□ -1.41
ZNF440-202ENST00000414255 LAMB4A4D0S4 1761 aa6.26□□□□□ -1.41
ZNF440-202ENST00000414255 GFRA2O00451 464 aa6.26□□□□□ -1.41
ZNF440-202ENST00000414255 KRT1P04264 644 aa6.26□□□□□ -1.41
ZNF440-202ENST00000414255 PGRP06401 933 aa6.26□□□□□ -1.41
ZNF440-202ENST00000414255 LDHBP07195 334 aaKnown RBP6.26□□□□□ -1.41
ZNF440-202ENST00000414255 SNRPA1P09661 255 aaKnown RBP6.26□□□□□ -1.41
ZNF440-202ENST00000414255 ATF3P18847 181 aa6.26□□□□□ -1.41
ZNF440-202ENST00000414255 GNA15P30679 374 aa6.26□□□□□ -1.41
ZNF440-202ENST00000414255 CCDC173Q0VFZ6 552 aa6.26□□□□□ -1.41
ZNF440-202ENST00000414255 NEXNQ0ZGT2 675 aa6.26□□□□□ -1.41
ZNF440-202ENST00000414255 CCDC85BQ15834 202 aaPredicted RBP6.26□□□□□ -1.41
ZNF440-202ENST00000414255 RABL6Q3YEC7 729 aaPredicted RBP6.26□□□□□ -1.41
ZNF440-202ENST00000414255 ZGPATQ8N5A5 531 aaKnown RBP6.26□□□□□ -1.41
ZNF440-202ENST00000414255 XAGE3Q8WTP9 111 aa6.26□□□□□ -1.41
ZNF440-202ENST00000414255 MYLIPQ8WY64 445 aa6.26□□□□□ -1.41
ZNF440-202ENST00000414255 RILPL2Q969X0 211 aa6.26□□□□□ -1.41
ZNF440-202ENST00000414255 ZSCAN31Q96LW9 406 aaPredicted RBP6.26□□□□□ -1.41
ZNF440-202ENST00000414255 ALDH8A1Q9H2A2 487 aaPredicted RBP6.26□□□□□ -1.41
ZNF440-202ENST00000414255 IL1RAPL2Q9NP60 686 aa6.26□□□□□ -1.41
ZNF440-202ENST00000414255 COPRSQ9NQ92 184 aa6.26□□□□□ -1.41
ZNF440-202ENST00000414255 PALD1Q9ULE6 856 aa6.26□□□□□ -1.41
ZNF440-202ENST00000414255 RGPD2P0DJD1 1756 aa6.26□□□□□ -1.41
ZNF440-202ENST00000414255 SPATA31A3Q5VYP0 1347 aa6.25□□□□□ -1.41
ZNF440-202ENST00000414255 TCAF2A6NFQ2 919 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms