RNA–Protein interactions for RNA: ENST00000413731.1

UPF3AP1-201, Transcript of UPF3A pseudogene 1, humanhuman

BASIC

Gene UPF3AP1, Length 1,126 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP1-201ENST00000413731 ITGA7Q13683 1181 aa9.76□□□□□ -0.85
UPF3AP1-201ENST00000413731 TMEM63BQ5T3F8 832 aa9.76□□□□□ -0.85
UPF3AP1-201ENST00000413731 SLFN13Q68D06 897 aa9.76□□□□□ -0.85
UPF3AP1-201ENST00000413731 EEPD1Q7L9B9 569 aa9.76□□□□□ -0.85
UPF3AP1-201ENST00000413731 CHMP4CQ96CF2 233 aa9.76□□□□□ -0.85
UPF3AP1-201ENST00000413731 EVI5LQ96CN4 794 aa9.76□□□□□ -0.85
UPF3AP1-201ENST00000413731 SCLYQ96I15 445 aa9.76□□□□□ -0.85
UPF3AP1-201ENST00000413731 AGBL1Q96MI9 1066 aa9.76□□□□□ -0.85
UPF3AP1-201ENST00000413731 TRPV6Q9H1D0 765 aa9.76□□□□□ -0.85
UPF3AP1-201ENST00000413731 ZSWIM6Q9HCJ5 1215 aa9.76□□□□□ -0.85
UPF3AP1-201ENST00000413731 PDGFCQ9NRA1 345 aa9.76□□□□□ -0.85
UPF3AP1-201ENST00000413731 MTMR4Q9NYA4 1195 aa9.76□□□□□ -0.85
UPF3AP1-201ENST00000413731 SIP14410 1827 aa9.75□□□□□ -0.85
UPF3AP1-201ENST00000413731 ZBBXA8MT70 800 aa9.75□□□□□ -0.85
UPF3AP1-201ENST00000413731 TMEM232C9JQI7 657 aa9.75□□□□□ -0.85
UPF3AP1-201ENST00000413731 CABYRO75952 493 aa9.75□□□□□ -0.85
UPF3AP1-201ENST00000413731 TTLL1O95922 423 aa9.75□□□□□ -0.85
UPF3AP1-201ENST00000413731 BMP3P12645 472 aa9.75□□□□□ -0.85
UPF3AP1-201ENST00000413731 PLA2G5P39877 138 aa9.75□□□□□ -0.85
UPF3AP1-201ENST00000413731 STAT2P52630 851 aa9.75□□□□□ -0.85
UPF3AP1-201ENST00000413731 SNAP25P60880 206 aa9.75□□□□□ -0.85
UPF3AP1-201ENST00000413731 GIMAP6Q6P9H5 292 aa9.75□□□□□ -0.85
UPF3AP1-201ENST00000413731 PLEKHM2Q8IWE5 1019 aa9.75□□□□□ -0.85
UPF3AP1-201ENST00000413731 MKL1Q969V6 931 aa9.75□□□□□ -0.85
UPF3AP1-201ENST00000413731 RILPL2Q969X0 211 aa9.75□□□□□ -0.85
UPF3AP1-201ENST00000413731 PURBQ96QR8 312 aaKnown RBP9.75□□□□□ -0.85
UPF3AP1-201ENST00000413731 SYNPO2Q9UMS6 1093 aa9.75□□□□□ -0.85
UPF3AP1-201ENST00000413731 MYH6P13533 1939 aa9.75□□□□□ -0.85
UPF3AP1-201ENST00000413731 TRANK1O15050 2925 aa9.75□□□□□ -0.85
UPF3AP1-201ENST00000413731 KIAA1217Q5T5P2 1943 aa9.74□□□□□ -0.85
UPF3AP1-201ENST00000413731 PALM3A6NDB9 673 aaPredicted RBP9.74□□□□□ -0.85
UPF3AP1-201ENST00000413731 EPOPA6NHQ4 379 aa9.74□□□□□ -0.85
UPF3AP1-201ENST00000413731 ASB14A6NK59 587 aa9.74□□□□□ -0.85
UPF3AP1-201ENST00000413731 DYNC1LI2O43237 492 aaPredicted RBP9.74□□□□□ -0.85
UPF3AP1-201ENST00000413731 ALAS1P13196 640 aa9.74□□□□□ -0.85
UPF3AP1-201ENST00000413731 KCNQ1P51787 676 aa9.74□□□□□ -0.85
UPF3AP1-201ENST00000413731 TTLL4Q14679 1199 aa9.74□□□□□ -0.85
UPF3AP1-201ENST00000413731 MUM1L1Q5H9M0 696 aa9.74□□□□□ -0.85
UPF3AP1-201ENST00000413731 TAPT1Q6NXT6 567 aa9.74□□□□□ -0.85
UPF3AP1-201ENST00000413731 CENPQQ7L2Z9 268 aaPredicted RBP9.74□□□□□ -0.85
UPF3AP1-201ENST00000413731 ZNF444Q8N0Y2 327 aaPredicted RBP9.74□□□□□ -0.85
UPF3AP1-201ENST00000413731 LRRN4Q8WUT4 740 aa9.74□□□□□ -0.85
UPF3AP1-201ENST00000413731 CCDC136Q96JN2 1154 aa9.74□□□□□ -0.85
UPF3AP1-201ENST00000413731 AP5M1Q9H0R1 490 aa9.74□□□□□ -0.85
UPF3AP1-201ENST00000413731 ALDH8A1Q9H2A2 487 aaPredicted RBP9.74□□□□□ -0.85
UPF3AP1-201ENST00000413731 TRMT13Q9NUP7 481 aaKnown RBP9.74□□□□□ -0.85
UPF3AP1-201ENST00000413731 PCDHA11Q9Y5I1 949 aa9.74□□□□□ -0.85
UPF3AP1-201ENST00000413731 SLC4A7Q9Y6M7 1214 aa9.74□□□□□ -0.85
UPF3AP1-201ENST00000413731 CARNS1A5YM72 827 aa9.73□□□□□ -0.85
UPF3AP1-201ENST00000413731 RFXAPO00287 272 aa9.73□□□□□ -0.85
UPF3AP1-201ENST00000413731 ZEB2O60315 1214 aa9.73□□□□□ -0.85
UPF3AP1-201ENST00000413731 ARHGEF15O94989 841 aa9.73□□□□□ -0.85
UPF3AP1-201ENST00000413731 APPP05067 770 aa9.73□□□□□ -0.85
UPF3AP1-201ENST00000413731 CA3P07451 260 aa9.73□□□□□ -0.85
UPF3AP1-201ENST00000413731 TSPY3P0CV98 308 aa9.73□□□□□ -0.85
UPF3AP1-201ENST00000413731 TSPY8P0CW00 308 aa9.73□□□□□ -0.85
UPF3AP1-201ENST00000413731 CYP2C9P11712 490 aa9.73□□□□□ -0.85
UPF3AP1-201ENST00000413731 BMP1P13497 986 aa9.73□□□□□ -0.85
UPF3AP1-201ENST00000413731 ATP2A2P16615 1042 aaKnown RBP9.73□□□□□ -0.85
UPF3AP1-201ENST00000413731 GNAT2P19087 354 aa9.73□□□□□ -0.85
UPF3AP1-201ENST00000413731 SLC1A4P43007 532 aa9.73□□□□□ -0.85
UPF3AP1-201ENST00000413731 IKQ13123 557 aaPredicted RBP9.73□□□□□ -0.85
UPF3AP1-201ENST00000413731 TKFCQ3LXA3 575 aa9.73□□□□□ -0.85
UPF3AP1-201ENST00000413731 KRT40Q6A162 431 aa9.73□□□□□ -0.85
UPF3AP1-201ENST00000413731 KCTD1Q719H9 257 aa9.73□□□□□ -0.85
UPF3AP1-201ENST00000413731 DEFB128Q7Z7B8 93 aa9.73□□□□□ -0.85
UPF3AP1-201ENST00000413731 FAM160B2Q86V87 743 aa9.73□□□□□ -0.85
UPF3AP1-201ENST00000413731 NEDD1Q8NHV4 660 aa9.73□□□□□ -0.85
UPF3AP1-201ENST00000413731 PPP1R13LQ8WUF5 828 aa9.73□□□□□ -0.85
UPF3AP1-201ENST00000413731 GMCL1Q96IK5 515 aa9.73□□□□□ -0.85
UPF3AP1-201ENST00000413731 TRERF1Q96PN7 1200 aa9.73□□□□□ -0.85
UPF3AP1-201ENST00000413731 OSBPL3Q9H4L5 887 aa9.73□□□□□ -0.85
UPF3AP1-201ENST00000413731 CERS4Q9HA82 394 aa9.73□□□□□ -0.85
UPF3AP1-201ENST00000413731 CYP39A1Q9NYL5 469 aa9.73□□□□□ -0.85
UPF3AP1-201ENST00000413731 PCDHGC3Q9UN70 934 aa9.73□□□□□ -0.85
UPF3AP1-201ENST00000413731 TNKSO95271 1327 aa9.73□□□□□ -0.85
UPF3AP1-201ENST00000413731 XIRP2A4UGR9 3374 aa9.72□□□□□ -0.85
UPF3AP1-201ENST00000413731 MICAL3Q7RTP6 2002 aa9.72□□□□□ -0.85
UPF3AP1-201ENST00000413731 MCCP23508 829 aa9.72□□□□□ -0.85
UPF3AP1-201ENST00000413731 PPARAQ07869 468 aa9.72□□□□□ -0.85
UPF3AP1-201ENST00000413731 SEMA3FQ13275 785 aa9.72□□□□□ -0.85
UPF3AP1-201ENST00000413731 ZMYM1Q5SVZ6 1142 aa9.72□□□□□ -0.85
UPF3AP1-201ENST00000413731 NSMFQ6X4W1 530 aa9.72□□□□□ -0.85
UPF3AP1-201ENST00000413731 IFNL3Q8IZI9 196 aa9.72□□□□□ -0.85
UPF3AP1-201ENST00000413731 STAG1Q8WVM7 1258 aa9.72□□□□□ -0.85
UPF3AP1-201ENST00000413731 HLA-CQ95604 372 aa9.72□□□□□ -0.85
UPF3AP1-201ENST00000413731 FAM122AQ96E09 287 aa9.72□□□□□ -0.85
UPF3AP1-201ENST00000413731 SEC62Q99442 399 aaKnown RBP9.72□□□□□ -0.85
UPF3AP1-201ENST00000413731 NACAP1Q9BZK3 213 aa9.72□□□□□ -0.85
UPF3AP1-201ENST00000413731 ZNF287Q9HBT7 754 aa9.72□□□□□ -0.85
UPF3AP1-201ENST00000413731 VTA1Q9NP79 307 aa9.72□□□□□ -0.85
UPF3AP1-201ENST00000413731 DIAPH3Q9NSV4 1193 aa9.72□□□□□ -0.85
UPF3AP1-201ENST00000413731 TFIP11Q9UBB9 837 aaKnown RBP9.72□□□□□ -0.85
UPF3AP1-201ENST00000413731 CCPG1Q9ULG6 757 aa9.72□□□□□ -0.85
UPF3AP1-201ENST00000413731 PRR12Q9ULL5 1215 aa9.72□□□□□ -0.85
UPF3AP1-201ENST00000413731 MYH7BA7E2Y1 1941 aa9.72□□□□□ -0.85
UPF3AP1-201ENST00000413731 ATG2AQ2TAZ0 1938 aa9.72□□□□□ -0.85
UPF3AP1-201ENST00000413731 LAMA4Q16363 1823 aa9.71□□□□□ -0.85
UPF3AP1-201ENST00000413731 A0A0D9SFI3 127 aa9.71□□□□□ -0.86
UPF3AP1-201ENST00000413731 NMT2O60551 498 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms