RNA–Protein interactions for RNA: ENST00000413380.5

HDAC9-206, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 799 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-206ENST00000413380 NIPA1Q7RTP0 329 aa13.21□□□□□ -0.29
HDAC9-206ENST00000413380 VSIG10LQ86VR7 867 aa13.21□□□□□ -0.29
HDAC9-206ENST00000413380 CCAR1Q8IX12 1150 aaKnown RBP13.21□□□□□ -0.29
HDAC9-206ENST00000413380 MSL3Q8N5Y2 521 aaKnown RBP13.21□□□□□ -0.29
HDAC9-206ENST00000413380 SP7Q8TDD2 431 aaPredicted RBP13.21□□□□□ -0.29
HDAC9-206ENST00000413380 FOXD4L4Q8WXT5 416 aaPredicted RBP13.21□□□□□ -0.29
HDAC9-206ENST00000413380 PGBD1Q96JS3 809 aa13.21□□□□□ -0.29
HDAC9-206ENST00000413380 ZNF396Q96N95 335 aaPredicted RBP13.21□□□□□ -0.29
HDAC9-206ENST00000413380 RTEL1Q9NZ71 1219 aa13.21□□□□□ -0.29
HDAC9-206ENST00000413380 WDR81Q562E7 1941 aa13.2□□□□□ -0.3
HDAC9-206ENST00000413380 IGLV3-22A0A075B6J6 115 aa13.2□□□□□ -0.3
HDAC9-206ENST00000413380 COBLO75128 1261 aa13.2□□□□□ -0.3
HDAC9-206ENST00000413380 YEATS4O95619 227 aa13.2□□□□□ -0.3
HDAC9-206ENST00000413380 GNRH1P01148 92 aa13.2□□□□□ -0.3
HDAC9-206ENST00000413380 FCGRTP55899 365 aa13.2□□□□□ -0.3
HDAC9-206ENST00000413380 CNTN2Q02246 1040 aa13.2□□□□□ -0.3
HDAC9-206ENST00000413380 DNM1Q05193 864 aaKnown RBP13.2□□□□□ -0.3
HDAC9-206ENST00000413380 MAP2K5Q13163 448 aa13.2□□□□□ -0.3
HDAC9-206ENST00000413380 IRF5Q13568 498 aa13.2□□□□□ -0.3
HDAC9-206ENST00000413380 PTPAQ15257 358 aa13.2□□□□□ -0.3
HDAC9-206ENST00000413380 Q4G0T1 1027 aa13.2□□□□□ -0.3
HDAC9-206ENST00000413380 MAMDC4Q6UXC1 1216 aa13.2□□□□□ -0.3
HDAC9-206ENST00000413380 IL31RAQ8NI17 732 aa13.2□□□□□ -0.3
HDAC9-206ENST00000413380 LENG9Q96B70 501 aa13.2□□□□□ -0.3
HDAC9-206ENST00000413380 TRIM47Q96LD4 638 aa13.2□□□□□ -0.3
HDAC9-206ENST00000413380 USP28Q96RU2 1077 aa13.2□□□□□ -0.3
HDAC9-206ENST00000413380 CFAP45Q9UL16 551 aa13.2□□□□□ -0.3
HDAC9-206ENST00000413380 PCDHB6Q9Y5E3 794 aa13.2□□□□□ -0.3
HDAC9-206ENST00000413380 HTTP42858 3142 aa13.19□□□□□ -0.3
HDAC9-206ENST00000413380 LAD1O00515 517 aa13.19□□□□□ -0.3
HDAC9-206ENST00000413380 TNPO2O14787 897 aaKnown RBP13.19□□□□□ -0.3
HDAC9-206ENST00000413380 BAG4O95429 457 aaKnown RBP13.19□□□□□ -0.3
HDAC9-206ENST00000413380 NR3C2P08235 984 aa13.19□□□□□ -0.3
HDAC9-206ENST00000413380 XRCC5P13010 732 aaKnown RBP13.19□□□□□ -0.3
HDAC9-206ENST00000413380 CCND2P30279 289 aa13.19□□□□□ -0.3
HDAC9-206ENST00000413380 KRT85P78386 507 aa13.19□□□□□ -0.3
HDAC9-206ENST00000413380 MRPS9P82933 396 aaKnown RBP13.19□□□□□ -0.3
HDAC9-206ENST00000413380 CEP55Q53EZ4 464 aa13.19□□□□□ -0.3
HDAC9-206ENST00000413380 WDR78Q5VTH9 848 aa13.19□□□□□ -0.3
HDAC9-206ENST00000413380 ARHGEF16Q5VV41 709 aa13.19□□□□□ -0.3
HDAC9-206ENST00000413380 ANO1Q5XXA6 986 aa13.19□□□□□ -0.3
HDAC9-206ENST00000413380 C4orf32Q8N8J7 132 aa13.19□□□□□ -0.3
HDAC9-206ENST00000413380 TMEM87AQ8NBN3 555 aa13.19□□□□□ -0.3
HDAC9-206ENST00000413380 LINC00301Q8NCQ3 95 aa13.19□□□□□ -0.3
HDAC9-206ENST00000413380 INPP4AQ96PE3 977 aaPredicted RBP13.19□□□□□ -0.3
HDAC9-206ENST00000413380 PURBQ96QR8 312 aaKnown RBP13.19□□□□□ -0.3
HDAC9-206ENST00000413380 NUDT12Q9BQG2 462 aa13.19□□□□□ -0.3
HDAC9-206ENST00000413380 KCNMB3Q9NPA1 279 aa13.19□□□□□ -0.3
HDAC9-206ENST00000413380 SLC5A4Q9NY91 659 aa13.19□□□□□ -0.3
HDAC9-206ENST00000413380 RCOR1Q9UKL0 485 aa13.19□□□□□ -0.3
HDAC9-206ENST00000413380 UBIAD1Q9Y5Z9 338 aa13.19□□□□□ -0.3
HDAC9-206ENST00000413380 ELP1O95163 1332 aa13.18□□□□□ -0.3
HDAC9-206ENST00000413380 SYNGAP1Q96PV0 1343 aa13.18□□□□□ -0.3
HDAC9-206ENST00000413380 ASB14A6NK59 587 aa13.18□□□□□ -0.3
HDAC9-206ENST00000413380 B4DLN1 442 aa13.18□□□□□ -0.3
HDAC9-206ENST00000413380 FAM86B1E9PN63 330 aa13.18□□□□□ -0.3
HDAC9-206ENST00000413380 MEIS1O00470 390 aa13.18□□□□□ -0.3
HDAC9-206ENST00000413380 TBX3O15119 743 aa13.18□□□□□ -0.3
HDAC9-206ENST00000413380 FKTNO75072 461 aa13.18□□□□□ -0.3
HDAC9-206ENST00000413380 PGK2P07205 417 aa13.18□□□□□ -0.3
HDAC9-206ENST00000413380 FAM86B2P0C5J1 330 aa13.18□□□□□ -0.3
HDAC9-206ENST00000413380 EIF2AK2P19525 551 aaKnown RBP13.18□□□□□ -0.3
HDAC9-206ENST00000413380 PSMC4P43686 418 aa13.18□□□□□ -0.3
HDAC9-206ENST00000413380 ATP2C1P98194 919 aaPredicted RBP13.18□□□□□ -0.3
HDAC9-206ENST00000413380 SETQ01105 290 aaPredicted RBP13.18□□□□□ -0.3
HDAC9-206ENST00000413380 CAP1Q01518 475 aa13.18□□□□□ -0.3
HDAC9-206ENST00000413380 SLC39A14Q15043 492 aa13.18□□□□□ -0.3
HDAC9-206ENST00000413380 SF3A1Q15459 793 aaKnown RBP13.18□□□□□ -0.3
HDAC9-206ENST00000413380 LETM2Q2VYF4 491 aa13.18□□□□□ -0.3
HDAC9-206ENST00000413380 OLFML2BQ68BL8 750 aa13.18□□□□□ -0.3
HDAC9-206ENST00000413380 ERO1AQ96HE7 468 aa13.18□□□□□ -0.3
HDAC9-206ENST00000413380 MAML3Q96JK9 1138 aa13.18□□□□□ -0.3
HDAC9-206ENST00000413380 MPHOSPH6Q99547 160 aaKnown RBP13.18□□□□□ -0.3
HDAC9-206ENST00000413380 APBA2Q99767 749 aa13.18□□□□□ -0.3
HDAC9-206ENST00000413380 FTOQ9C0B1 505 aaKnown RBP eCLIP13.18□□□□□ -0.3
HDAC9-206ENST00000413380 SCAND2PQ9GZW5 306 aaPredicted RBP13.18□□□□□ -0.3
HDAC9-206ENST00000413380 CEP131Q9UPN4 1083 aa13.18□□□□□ -0.3
HDAC9-206ENST00000413380 DOCK5Q9H7D0 1870 aa13.17□□□□□ -0.3
HDAC9-206ENST00000413380 MAFGO15525 162 aa13.17□□□□□ -0.3
HDAC9-206ENST00000413380 NEMFO60524 1076 aa13.17□□□□□ -0.3
HDAC9-206ENST00000413380 CCNT1O60563 726 aaKnown RBP13.17□□□□□ -0.3
HDAC9-206ENST00000413380 PPP6R2O75170 966 aa13.17□□□□□ -0.3
HDAC9-206ENST00000413380 EIF3JO75822 258 aaKnown RBP13.17□□□□□ -0.3
HDAC9-206ENST00000413380 TDP2O95551 362 aa13.17□□□□□ -0.3
HDAC9-206ENST00000413380 ICAM3P32942 547 aa13.17□□□□□ -0.3
HDAC9-206ENST00000413380 PRPHP41219 470 aa13.17□□□□□ -0.3
HDAC9-206ENST00000413380 RGS2P41220 211 aa13.17□□□□□ -0.3
HDAC9-206ENST00000413380 NBR1Q14596 966 aa13.17□□□□□ -0.3
HDAC9-206ENST00000413380 KIF22Q14807 665 aa13.17□□□□□ -0.3
HDAC9-206ENST00000413380 ARL6IP4Q66PJ3 421 aaKnown RBP13.17□□□□□ -0.3
HDAC9-206ENST00000413380 ETNPPLQ8TBG4 499 aa13.17□□□□□ -0.3
HDAC9-206ENST00000413380 KCNG4Q8TDN1 519 aa13.17□□□□□ -0.3
HDAC9-206ENST00000413380 GPRASP2Q96D09 838 aa13.17□□□□□ -0.3
HDAC9-206ENST00000413380 KIF12Q96FN5 646 aa13.17□□□□□ -0.3
HDAC9-206ENST00000413380 MTMR9Q96QG7 549 aa13.17□□□□□ -0.3
HDAC9-206ENST00000413380 PHF12Q96QT6 1004 aa13.17□□□□□ -0.3
HDAC9-206ENST00000413380 MXRA8Q9BRK3 442 aa13.17□□□□□ -0.3
HDAC9-206ENST00000413380 BEGAINQ9BUH8 593 aa13.17□□□□□ -0.3
HDAC9-206ENST00000413380 ARHGAP39Q9C0H5 1083 aa13.17□□□□□ -0.3
HDAC9-206ENST00000413380 JADE2Q9NQC1 790 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms