RNA–Protein interactions for RNA: ENST00000413040.6

NUB1-201, Transcript of negative regulator of ubiquitin like proteins 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NUB1, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUB1-201ENST00000413040 LRRIQ3A6PVS8 624 aaPredicted RBP15.35■□□□□ 0.05
NUB1-201ENST00000413040 RBM5P52756 815 aaKnown RBP eCLIP15.35■□□□□ 0.05
NUB1-201ENST00000413040 MEX3CQ5U5Q3 659 aaKnown RBP15.35■□□□□ 0.05
NUB1-201ENST00000413040 RIOX1Q9H6W3 641 aa15.35■□□□□ 0.05
NUB1-201ENST00000413040 BMP2KQ9NSY1 1161 aaPredicted RBP15.35■□□□□ 0.05
NUB1-201ENST00000413040 KIAA1551Q9HCM1 1747 aa15.35■□□□□ 0.05
NUB1-201ENST00000413040 AHDC1Q5TGY3 1603 aaPredicted RBP15.34■□□□□ 0.05
NUB1-201ENST00000413040 LRRC53A6NM62 1247 aa15.34■□□□□ 0.05
NUB1-201ENST00000413040 EIF3CLB5ME19 914 aaKnown RBP15.34■□□□□ 0.05
NUB1-201ENST00000413040 BUB1O43683 1085 aa15.34■□□□□ 0.05
NUB1-201ENST00000413040 CAPN2P17655 700 aa15.34■□□□□ 0.05
NUB1-201ENST00000413040 MEA1Q16626 185 aa15.34■□□□□ 0.05
NUB1-201ENST00000413040 CENPPQ6IPU0 288 aa15.34■□□□□ 0.05
NUB1-201ENST00000413040 TXLNBQ8N3L3 684 aa15.34■□□□□ 0.05
NUB1-201ENST00000413040 HNRNPLLQ8WVV9 542 aaKnown RBP15.34■□□□□ 0.05
NUB1-201ENST00000413040 EIF3CQ99613 913 aaKnown RBP15.34■□□□□ 0.05
NUB1-201ENST00000413040 TTYH3Q9C0H2 523 aa15.34■□□□□ 0.05
NUB1-201ENST00000413040 SMARCAL1Q9NZC9 954 aa15.34■□□□□ 0.05
NUB1-201ENST00000413040 ARHGAP20Q9P2F6 1191 aa15.34■□□□□ 0.05
NUB1-201ENST00000413040 E9PMD0 336 aa15.34■□□□□ 0.05
NUB1-201ENST00000413040 ZNF263O14978 683 aa15.34■□□□□ 0.05
NUB1-201ENST00000413040 ZBTB22O15209 634 aa15.34■□□□□ 0.05
NUB1-201ENST00000413040 TACC1O75410 805 aa15.34■□□□□ 0.05
NUB1-201ENST00000413040 MAGEA1P43355 309 aa15.34■□□□□ 0.05
NUB1-201ENST00000413040 KIF11P52732 1056 aa15.34■□□□□ 0.05
NUB1-201ENST00000413040 VAV2P52735 878 aa15.34■□□□□ 0.05
NUB1-201ENST00000413040 ASPRV1Q53RT3 343 aa15.34■□□□□ 0.05
NUB1-201ENST00000413040 CCDC170Q8IYT3 715 aa15.34■□□□□ 0.05
NUB1-201ENST00000413040 JMJD4Q9H9V9 463 aa15.34■□□□□ 0.05
NUB1-201ENST00000413040 POLD4Q9HCU8 107 aa15.34■□□□□ 0.05
NUB1-201ENST00000413040 ZNF219Q9P2Y4 722 aaPredicted RBP15.34■□□□□ 0.05
NUB1-201ENST00000413040 STK17AQ9UEE5 414 aa15.34■□□□□ 0.05
NUB1-201ENST00000413040 CAPN6Q9Y6Q1 641 aa15.34■□□□□ 0.05
NUB1-201ENST00000413040 WNK3Q9BYP7 1800 aa15.34■□□□□ 0.05
NUB1-201ENST00000413040 CASZ1Q86V15 1759 aa15.34■□□□□ 0.05
NUB1-201ENST00000413040 MYH10P35580 1976 aa15.34■□□□□ 0.05
NUB1-201ENST00000413040 TULP1O00294 542 aaPredicted RBP15.34■□□□□ 0.05
NUB1-201ENST00000413040 FGFR1OPO95684 399 aaKnown RBP15.34■□□□□ 0.05
NUB1-201ENST00000413040 GYS1P13807 737 aa15.34■□□□□ 0.05
NUB1-201ENST00000413040 IL1R1P14778 569 aa15.34■□□□□ 0.05
NUB1-201ENST00000413040 PPP1R2P41236 205 aa15.34■□□□□ 0.05
NUB1-201ENST00000413040 USP14P54578 494 aa15.34■□□□□ 0.05
NUB1-201ENST00000413040 SNAP25P60880 206 aa15.34■□□□□ 0.05
NUB1-201ENST00000413040 TUBB4BP68371 445 aa15.34■□□□□ 0.05
NUB1-201ENST00000413040 CKAP4Q07065 602 aaKnown RBP15.34■□□□□ 0.05
NUB1-201ENST00000413040 MAN2A1Q16706 1144 aa15.34■□□□□ 0.05
NUB1-201ENST00000413040 CCDC181Q5TID7 509 aa15.34■□□□□ 0.05
NUB1-201ENST00000413040 CERS3Q8IU89 383 aa15.34■□□□□ 0.05
NUB1-201ENST00000413040 RAD54LQ92698 747 aa15.34■□□□□ 0.05
NUB1-201ENST00000413040 MTMR9Q96QG7 549 aa15.34■□□□□ 0.05
NUB1-201ENST00000413040 ERGIC2Q96RQ1 377 aa15.34■□□□□ 0.05
NUB1-201ENST00000413040 UBXN6Q9BZV1 441 aa15.34■□□□□ 0.05
NUB1-201ENST00000413040 PSTPIP2Q9H939 334 aa15.34■□□□□ 0.05
NUB1-201ENST00000413040 KIAA1024Q9UPX6 916 aa15.34■□□□□ 0.05
NUB1-201ENST00000413040 PDE2AO00408 941 aaPredicted RBP15.33■□□□□ 0.04
NUB1-201ENST00000413040 TTLL1O95922 423 aa15.33■□□□□ 0.04
NUB1-201ENST00000413040 ECM1Q16610 540 aa15.33■□□□□ 0.04
NUB1-201ENST00000413040 HERC4Q5GLZ8 1057 aaPredicted RBP15.33■□□□□ 0.04
NUB1-201ENST00000413040 SAMD1Q6SPF0 538 aaPredicted RBP15.33■□□□□ 0.04
NUB1-201ENST00000413040 RIN2Q8WYP3 895 aaPredicted RBP15.33■□□□□ 0.04
NUB1-201ENST00000413040 ACBD3Q9H3P7 528 aa15.33■□□□□ 0.04
NUB1-201ENST00000413040 PCDHA13Q9Y5I0 950 aa15.33■□□□□ 0.04
NUB1-201ENST00000413040 DLEC1Q9Y238 1755 aa15.33■□□□□ 0.04
NUB1-201ENST00000413040 LAMB1P07942 1786 aa15.33■□□□□ 0.04
NUB1-201ENST00000413040 NPHP3-ACAD11A0A0J9YXS1 232 aa15.33■□□□□ 0.04
NUB1-201ENST00000413040 RGL2O15211 777 aa15.33■□□□□ 0.04
NUB1-201ENST00000413040 NT5C2P49902 561 aa15.33■□□□□ 0.04
NUB1-201ENST00000413040 MRPL12P52815 198 aaKnown RBP15.33■□□□□ 0.04
NUB1-201ENST00000413040 ZSCAN26Q16670 478 aa15.33■□□□□ 0.04
NUB1-201ENST00000413040 TAF3Q5VWG9 929 aa15.33■□□□□ 0.04
NUB1-201ENST00000413040 TMC4Q7Z404 712 aa15.33■□□□□ 0.04
NUB1-201ENST00000413040 MYOCDQ8IZQ8 938 aa15.33■□□□□ 0.04
NUB1-201ENST00000413040 CUL5Q93034 780 aa15.33■□□□□ 0.04
NUB1-201ENST00000413040 EHD2Q9NZN4 543 aa15.33■□□□□ 0.04
NUB1-201ENST00000413040 COL22A1Q8NFW1 1626 aaPredicted RBP15.33■□□□□ 0.04
NUB1-201ENST00000413040 BBOX1O75936 387 aa15.32■□□□□ 0.04
NUB1-201ENST00000413040 EPS15P42566 896 aa15.32■□□□□ 0.04
NUB1-201ENST00000413040 APBA1Q02410 837 aa15.32■□□□□ 0.04
NUB1-201ENST00000413040 RASSF7Q02833 373 aa15.32■□□□□ 0.04
NUB1-201ENST00000413040 FAM26FQ5R3K3 315 aa15.32■□□□□ 0.04
NUB1-201ENST00000413040 GOLGA6L1Q8N7Z2 621 aa15.32■□□□□ 0.04
NUB1-201ENST00000413040 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.32■□□□□ 0.04
NUB1-201ENST00000413040 PANK4Q9NVE7 773 aa15.32■□□□□ 0.04
NUB1-201ENST00000413040 NCK2O43639 380 aa15.32■□□□□ 0.04
NUB1-201ENST00000413040 GFPT1Q06210 699 aaPredicted RBP15.32■□□□□ 0.04
NUB1-201ENST00000413040 ZNF543Q08ER8 600 aa15.32■□□□□ 0.04
NUB1-201ENST00000413040 CCDC70Q6NSX1 233 aa15.32■□□□□ 0.04
NUB1-201ENST00000413040 GUF1Q8N442 669 aaKnown RBP15.32■□□□□ 0.04
NUB1-201ENST00000413040 PLAGL2Q9UPG8 496 aa15.32■□□□□ 0.04
NUB1-201ENST00000413040 RREB1Q92766 1687 aa15.32■□□□□ 0.04
NUB1-201ENST00000413040 PNMA6FA0A0J9YX94 578 aa15.32■□□□□ 0.04
NUB1-201ENST00000413040 PVALEFA0A1B0GWK0 134 aa15.32■□□□□ 0.04
NUB1-201ENST00000413040 PPP1R11O60927 126 aaPredicted RBP15.32■□□□□ 0.04
NUB1-201ENST00000413040 RNASE9P60153 205 aaKnown RBP15.32■□□□□ 0.04
NUB1-201ENST00000413040 SLC7A5Q01650 507 aa15.32■□□□□ 0.04
NUB1-201ENST00000413040 SHROOM1Q2M3G4 852 aaPredicted RBP15.32■□□□□ 0.04
NUB1-201ENST00000413040 CCDC84Q86UT8 332 aaPredicted RBP15.32■□□□□ 0.04
NUB1-201ENST00000413040 COG1Q8WTW3 980 aa15.32■□□□□ 0.04
NUB1-201ENST00000413040 COL5A3P25940 1745 aaPredicted RBP15.32■□□□□ 0.04
NUB1-201ENST00000413040 ESYT2A0FGR8 921 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms