RNA–Protein interactions for RNA: ENST00000413023.1

HMGN1P34-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 34, humanhuman

BASIC

Gene HMGN1P34, Length 290 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P34-201ENST00000413023 RPTORQ8N122 1335 aa9.72□□□□□ -0.85
HMGN1P34-201ENST00000413023 DICER1Q9UPY3 1922 aaKnown RBP9.72□□□□□ -0.85
HMGN1P34-201ENST00000413023 GLTPD2A6NH11 291 aa9.71□□□□□ -0.86
HMGN1P34-201ENST00000413023 SPDYE3A6NKU9 549 aa9.71□□□□□ -0.86
HMGN1P34-201ENST00000413023 SMTNL1A8MU46 457 aa9.71□□□□□ -0.86
HMGN1P34-201ENST00000413023 C19orf81C9J6K1 198 aa9.71□□□□□ -0.86
HMGN1P34-201ENST00000413023 E9PMD0 336 aa9.71□□□□□ -0.86
HMGN1P34-201ENST00000413023 GOLGA6L19H0YKK7 550 aa9.71□□□□□ -0.86
HMGN1P34-201ENST00000413023 POTEIP0CG38 1075 aa9.71□□□□□ -0.86
HMGN1P34-201ENST00000413023 POTEJP0CG39 1038 aa9.71□□□□□ -0.86
HMGN1P34-201ENST00000413023 ALAS1P13196 640 aa9.71□□□□□ -0.86
HMGN1P34-201ENST00000413023 ZNF18P17022 549 aa9.71□□□□□ -0.86
HMGN1P34-201ENST00000413023 PTGS1P23219 599 aa9.71□□□□□ -0.86
HMGN1P34-201ENST00000413023 ERCC5P28715 1186 aaPredicted RBP9.71□□□□□ -0.86
HMGN1P34-201ENST00000413023 PRCPP42785 496 aa9.71□□□□□ -0.86
HMGN1P34-201ENST00000413023 PMS1P54277 932 aaKnown RBP9.71□□□□□ -0.86
HMGN1P34-201ENST00000413023 USP14P54578 494 aa9.71□□□□□ -0.86
HMGN1P34-201ENST00000413023 PSMC6P62333 389 aa9.71□□□□□ -0.86
HMGN1P34-201ENST00000413023 FANCCQ00597 558 aa9.71□□□□□ -0.86
HMGN1P34-201ENST00000413023 GPR162Q16538 588 aa9.71□□□□□ -0.86
HMGN1P34-201ENST00000413023 HSP90AA4PQ58FG1 418 aa9.71□□□□□ -0.86
HMGN1P34-201ENST00000413023 HYIQ5T013 277 aa9.71□□□□□ -0.86
HMGN1P34-201ENST00000413023 USP50Q70EL3 339 aaPredicted RBP9.71□□□□□ -0.86
HMGN1P34-201ENST00000413023 APTXQ7Z2E3 356 aaKnown RBP9.71□□□□□ -0.86
HMGN1P34-201ENST00000413023 KRT26Q7Z3Y9 468 aa9.71□□□□□ -0.86
HMGN1P34-201ENST00000413023 RAD54LQ92698 747 aa9.71□□□□□ -0.86
HMGN1P34-201ENST00000413023 HPS3Q969F9 1004 aa9.71□□□□□ -0.86
HMGN1P34-201ENST00000413023 CDCA5Q96FF9 252 aa9.71□□□□□ -0.86
HMGN1P34-201ENST00000413023 PYM1Q9BRP8 204 aaKnown RBP9.71□□□□□ -0.86
HMGN1P34-201ENST00000413023 XPO4Q9C0E2 1151 aaKnown RBP9.71□□□□□ -0.86
HMGN1P34-201ENST00000413023 TAF1DQ9H5J8 278 aaPredicted RBP9.71□□□□□ -0.86
HMGN1P34-201ENST00000413023 AS3MTQ9HBK9 375 aa9.71□□□□□ -0.86
HMGN1P34-201ENST00000413023 INTS13Q9NVM9 706 aa9.71□□□□□ -0.86
HMGN1P34-201ENST00000413023 IFNKQ9P0W0 207 aa9.71□□□□□ -0.86
HMGN1P34-201ENST00000413023 MAPK8IP1Q9UQF2 711 aa9.71□□□□□ -0.86
HMGN1P34-201ENST00000413023 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.71□□□□□ -0.86
HMGN1P34-201ENST00000413023 MEIS1O00470 390 aa9.7□□□□□ -0.86
HMGN1P34-201ENST00000413023 TBX3O15119 743 aa9.7□□□□□ -0.86
HMGN1P34-201ENST00000413023 ZBED4O75132 1171 aa9.7□□□□□ -0.86
HMGN1P34-201ENST00000413023 PSMD10O75832 226 aa9.7□□□□□ -0.86
HMGN1P34-201ENST00000413023 ITGB5P18084 799 aa9.7□□□□□ -0.86
HMGN1P34-201ENST00000413023 CDC25BP30305 580 aa9.7□□□□□ -0.86
HMGN1P34-201ENST00000413023 TXLNAP40222 546 aa9.7□□□□□ -0.86
HMGN1P34-201ENST00000413023 MRPS9P82933 396 aaKnown RBP9.7□□□□□ -0.86
HMGN1P34-201ENST00000413023 MYL5Q02045 173 aa9.7□□□□□ -0.86
HMGN1P34-201ENST00000413023 STK4Q13043 487 aa9.7□□□□□ -0.86
HMGN1P34-201ENST00000413023 TRAF1Q13077 416 aa9.7□□□□□ -0.86
HMGN1P34-201ENST00000413023 MOGSQ13724 837 aa9.7□□□□□ -0.86
HMGN1P34-201ENST00000413023 KCNB1Q14721 858 aa9.7□□□□□ -0.86
HMGN1P34-201ENST00000413023 COG2Q14746 738 aa9.7□□□□□ -0.86
HMGN1P34-201ENST00000413023 TMEM132BQ14DG7 1078 aa9.7□□□□□ -0.86
HMGN1P34-201ENST00000413023 TREML2Q5T2D2 321 aa9.7□□□□□ -0.86
HMGN1P34-201ENST00000413023 ZNF658Q5TYW1 1059 aaPredicted RBP9.7□□□□□ -0.86
HMGN1P34-201ENST00000413023 DPY19L2Q6NUT2 758 aa9.7□□□□□ -0.86
HMGN1P34-201ENST00000413023 OTOP1Q7RTM1 612 aa9.7□□□□□ -0.86
HMGN1P34-201ENST00000413023 CCDC186Q7Z3E2 898 aa9.7□□□□□ -0.86
HMGN1P34-201ENST00000413023 CATSPER3Q86XQ3 398 aa9.7□□□□□ -0.86
HMGN1P34-201ENST00000413023 SULF1Q8IWU6 871 aa9.7□□□□□ -0.86
HMGN1P34-201ENST00000413023 ADSSL1Q8N142 457 aa9.7□□□□□ -0.86
HMGN1P34-201ENST00000413023 FAM43AQ8N2R8 423 aa9.7□□□□□ -0.86
HMGN1P34-201ENST00000413023 SNX29Q8TEQ0 813 aa9.7□□□□□ -0.86
HMGN1P34-201ENST00000413023 SLC5A5Q92911 643 aa9.7□□□□□ -0.86
HMGN1P34-201ENST00000413023 MRFAP1L1Q96HT8 127 aa9.7□□□□□ -0.86
HMGN1P34-201ENST00000413023 FAM20AQ96MK3 541 aa9.7□□□□□ -0.86
HMGN1P34-201ENST00000413023 TRERF1Q96PN7 1200 aa9.7□□□□□ -0.86
HMGN1P34-201ENST00000413023 NAP1L4Q99733 375 aaKnown RBP9.7□□□□□ -0.86
HMGN1P34-201ENST00000413023 TRIM9Q9C026 710 aa9.7□□□□□ -0.86
HMGN1P34-201ENST00000413023 CUEDC2Q9H467 287 aa9.7□□□□□ -0.86
HMGN1P34-201ENST00000413023 BCAS3Q9H6U6 928 aa9.7□□□□□ -0.86
HMGN1P34-201ENST00000413023 ELP3Q9H9T3 547 aa9.7□□□□□ -0.86
HMGN1P34-201ENST00000413023 RTN4Q9NQC3 1192 aaKnown RBP9.7□□□□□ -0.86
HMGN1P34-201ENST00000413023 NPHP3-ACAD11A0A0J9YXS1 232 aa9.69□□□□□ -0.86
HMGN1P34-201ENST00000413023 ZBTB39O15060 712 aa9.69□□□□□ -0.86
HMGN1P34-201ENST00000413023 DHX15O43143 795 aaKnown RBP9.69□□□□□ -0.86
HMGN1P34-201ENST00000413023 MARCH6O60337 910 aa9.69□□□□□ -0.86
HMGN1P34-201ENST00000413023 RHOBTB3O94955 611 aa9.69□□□□□ -0.86
HMGN1P34-201ENST00000413023 FCER1AP12319 257 aa9.69□□□□□ -0.86
HMGN1P34-201ENST00000413023 ZNF76P36508 570 aa9.69□□□□□ -0.86
HMGN1P34-201ENST00000413023 CCT6AP40227 531 aaKnown RBP9.69□□□□□ -0.86
HMGN1P34-201ENST00000413023 TMEM266Q2M3C6 531 aa9.69□□□□□ -0.86
HMGN1P34-201ENST00000413023 ARSHQ5FYA8 562 aa9.69□□□□□ -0.86
HMGN1P34-201ENST00000413023 SPATA1Q5VX52 437 aa9.69□□□□□ -0.86
HMGN1P34-201ENST00000413023 KRT79Q5XKE5 535 aa9.69□□□□□ -0.86
HMGN1P34-201ENST00000413023 KLHL10Q6JEL2 608 aa9.69□□□□□ -0.86
HMGN1P34-201ENST00000413023 B3GNT9Q6UX72 402 aa9.69□□□□□ -0.86
HMGN1P34-201ENST00000413023 SV2BQ7L1I2 683 aa9.69□□□□□ -0.86
HMGN1P34-201ENST00000413023 ZSCAN30Q86W11 494 aa9.69□□□□□ -0.86
HMGN1P34-201ENST00000413023 IRF2BP1Q8IU81 584 aa9.69□□□□□ -0.86
HMGN1P34-201ENST00000413023 CACTINQ8WUQ7 758 aaKnown RBP9.69□□□□□ -0.86
HMGN1P34-201ENST00000413023 DNAJC19Q96DA6 116 aa9.69□□□□□ -0.86
HMGN1P34-201ENST00000413023 TRIM44Q96DX7 344 aaPredicted RBP9.69□□□□□ -0.86
HMGN1P34-201ENST00000413023 CALML4Q96GE6 196 aa9.69□□□□□ -0.86
HMGN1P34-201ENST00000413023 MXRA8Q9BRK3 442 aa9.69□□□□□ -0.86
HMGN1P34-201ENST00000413023 WDR11Q9BZH6 1224 aa9.69□□□□□ -0.86
HMGN1P34-201ENST00000413023 HOMER2Q9NSB8 354 aa9.69□□□□□ -0.86
HMGN1P34-201ENST00000413023 ZNF214Q9UL59 606 aaPredicted RBP9.69□□□□□ -0.86
HMGN1P34-201ENST00000413023 ZKSCAN5Q9Y2L8 839 aa9.69□□□□□ -0.86
HMGN1P34-201ENST00000413023 NFE2L3Q9Y4A8 694 aa9.69□□□□□ -0.86
HMGN1P34-201ENST00000413023 UBIAD1Q9Y5Z9 338 aa9.69□□□□□ -0.86
HMGN1P34-201ENST00000413023 POLR2AP24928 1970 aaKnown RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms