RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 CYP46A1Q9Y6A2 500 aa21.71■■□□□ 1.07
TRIM56-202ENST00000412507 V9GY48 417 aaPredicted RBP21.71■■□□□ 1.07
TRIM56-202ENST00000412507 ARVCFO00192 962 aa21.7■■□□□ 1.06
TRIM56-202ENST00000412507 CABYRO75952 493 aa21.7■■□□□ 1.06
TRIM56-202ENST00000412507 RGS20O76081 388 aa21.7■■□□□ 1.06
TRIM56-202ENST00000412507 CLTBP09497 229 aa21.7■■□□□ 1.06
TRIM56-202ENST00000412507 CCND2P30279 289 aa21.7■■□□□ 1.06
TRIM56-202ENST00000412507 CPT1AP50416 773 aa21.7■■□□□ 1.06
TRIM56-202ENST00000412507 CDK7P50613 346 aa21.7■■□□□ 1.06
TRIM56-202ENST00000412507 ANKRD33Q7Z3H0 272 aa21.7■■□□□ 1.06
TRIM56-202ENST00000412507 TM6SF1Q9BZW5 370 aa21.7■■□□□ 1.06
TRIM56-202ENST00000412507 PSTPIP2Q9H939 334 aa21.7■■□□□ 1.06
TRIM56-202ENST00000412507 DDX41Q9UJV9 622 aaKnown RBP21.7■■□□□ 1.06
TRIM56-202ENST00000412507 MRVI1Q9Y6F6 885 aa21.7■■□□□ 1.06
TRIM56-202ENST00000412507 FRMPD4Q14CM0 1322 aa21.7■■□□□ 1.06
TRIM56-202ENST00000412507 TRIP12Q14669 1992 aaPredicted RBP21.69■■□□□ 1.06
TRIM56-202ENST00000412507 TRIM43BA6NCK2 446 aa21.69■■□□□ 1.06
TRIM56-202ENST00000412507 DCDC2CA8MYV0 355 aa21.69■■□□□ 1.06
TRIM56-202ENST00000412507 PIK3CDO00329 1044 aa21.69■■□□□ 1.06
TRIM56-202ENST00000412507 MYL3P08590 195 aa21.69■■□□□ 1.06
TRIM56-202ENST00000412507 BMP8BP34820 402 aa21.69■■□□□ 1.06
TRIM56-202ENST00000412507 BRDTQ58F21 947 aaPredicted RBP21.69■■□□□ 1.06
TRIM56-202ENST00000412507 WWC2Q6AWC2 1192 aa21.69■■□□□ 1.06
TRIM56-202ENST00000412507 TRIM43Q96BQ3 446 aaPredicted RBP21.69■■□□□ 1.06
TRIM56-202ENST00000412507 TOX2Q96NM4 488 aa21.69■■□□□ 1.06
TRIM56-202ENST00000412507 UPF3BQ9BZI7 483 aaKnown RBP21.69■■□□□ 1.06
TRIM56-202ENST00000412507 POLR3EQ9NVU0 708 aa21.69■■□□□ 1.06
TRIM56-202ENST00000412507 NID2Q14112 1375 aa21.69■■□□□ 1.06
TRIM56-202ENST00000412507 CCDC196A0A1B0GTZ2 297 aa21.68■■□□□ 1.06
TRIM56-202ENST00000412507 A6NJR5 290 aa21.68■■□□□ 1.06
TRIM56-202ENST00000412507 GH1P01241 217 aa21.68■■□□□ 1.06
TRIM56-202ENST00000412507 PSMC6P62333 389 aa21.68■■□□□ 1.06
TRIM56-202ENST00000412507 ARHGAP1Q07960 439 aa21.68■■□□□ 1.06
TRIM56-202ENST00000412507 FAAP100Q0VG06 881 aa21.68■■□□□ 1.06
TRIM56-202ENST00000412507 TOB2Q14106 344 aaPredicted RBP21.68■■□□□ 1.06
TRIM56-202ENST00000412507 UBE2SQ16763 222 aa21.68■■□□□ 1.06
TRIM56-202ENST00000412507 LBHD1Q9BQE6 289 aaPredicted RBP21.68■■□□□ 1.06
TRIM56-202ENST00000412507 UBE2OQ9C0C9 1292 aaKnown RBP21.68■■□□□ 1.06
TRIM56-202ENST00000412507 GRIN2DO15399 1336 aa21.68■■□□□ 1.06
TRIM56-202ENST00000412507 MROH7Q68CQ1 1323 aa21.68■■□□□ 1.06
TRIM56-202ENST00000412507 NAPAP54920 295 aa21.67■■□□□ 1.06
TRIM56-202ENST00000412507 MRPS9P82933 396 aaKnown RBP21.67■■□□□ 1.06
TRIM56-202ENST00000412507 PURAQ00577 322 aaKnown RBP21.67■■□□□ 1.06
TRIM56-202ENST00000412507 ITGA7Q13683 1181 aa21.67■■□□□ 1.06
TRIM56-202ENST00000412507 TYW1BQ6NUM6 668 aa21.67■■□□□ 1.06
TRIM56-202ENST00000412507 SLC43A3Q8NBI5 491 aa21.67■■□□□ 1.06
TRIM56-202ENST00000412507 TMEM39AQ9NV64 488 aa21.67■■□□□ 1.06
TRIM56-202ENST00000412507 PDIA3P30101 505 aaKnown RBP21.66■■□□□ 1.06
TRIM56-202ENST00000412507 EVCP57679 992 aa21.66■■□□□ 1.06
TRIM56-202ENST00000412507 CCT2P78371 535 aaKnown RBP21.66■■□□□ 1.06
TRIM56-202ENST00000412507 FAM126BQ8IXS8 530 aa21.66■■□□□ 1.06
TRIM56-202ENST00000412507 AFG1LQ8WV93 481 aa21.66■■□□□ 1.06
TRIM56-202ENST00000412507 BADQ92934 168 aa21.66■■□□□ 1.06
TRIM56-202ENST00000412507 LARP6Q9BRS8 491 aaKnown RBP21.66■■□□□ 1.06
TRIM56-202ENST00000412507 MTG1Q9BT17 334 aaPredicted RBP21.66■■□□□ 1.06
TRIM56-202ENST00000412507 KAT6AQ92794 2004 aa21.66■■□□□ 1.06
TRIM56-202ENST00000412507 A0A1W2PPC1 479 aa21.65■■□□□ 1.06
TRIM56-202ENST00000412507 KIAA0355O15063 1070 aa21.65■■□□□ 1.06
TRIM56-202ENST00000412507 SORBS3O60504 671 aa21.65■■□□□ 1.06
TRIM56-202ENST00000412507 MMP3P08254 477 aa21.65■■□□□ 1.06
TRIM56-202ENST00000412507 ITGB8P26012 769 aa21.65■■□□□ 1.06
TRIM56-202ENST00000412507 KCNV1Q6PIU1 500 aa21.65■■□□□ 1.06
TRIM56-202ENST00000412507 NCOA5Q9HCD5 579 aaKnown RBP21.65■■□□□ 1.06
TRIM56-202ENST00000412507 PDRG1Q9NUG6 133 aa21.65■■□□□ 1.06
TRIM56-202ENST00000412507 RTEL1Q9NZ71 1219 aa21.65■■□□□ 1.06
TRIM56-202ENST00000412507 hCG_1984214I3L0E3 225 aa21.64■■□□□ 1.05
TRIM56-202ENST00000412507 STXBP3O00186 592 aa21.64■■□□□ 1.05
TRIM56-202ENST00000412507 TLR3O15455 904 aaKnown RBP21.64■■□□□ 1.05
TRIM56-202ENST00000412507 RAG1P15918 1043 aa21.64■■□□□ 1.05
TRIM56-202ENST00000412507 SP2Q02086 613 aa21.64■■□□□ 1.05
TRIM56-202ENST00000412507 PPP1R18Q6NYC8 613 aa21.64■■□□□ 1.05
TRIM56-202ENST00000412507 DHX37Q8IY37 1157 aaKnown RBP21.64■■□□□ 1.05
TRIM56-202ENST00000412507 ZNF713Q8N859 430 aaPredicted RBP21.64■■□□□ 1.05
TRIM56-202ENST00000412507 PHKBQ93100 1093 aa21.64■■□□□ 1.05
TRIM56-202ENST00000412507 BARHL2Q9NY43 387 aa21.64■■□□□ 1.05
TRIM56-202ENST00000412507 SPDYE3A6NKU9 549 aa21.63■■□□□ 1.05
TRIM56-202ENST00000412507 KPNA6O60684 536 aa21.63■■□□□ 1.05
TRIM56-202ENST00000412507 PPFIA3O75145 1194 aa21.63■■□□□ 1.05
TRIM56-202ENST00000412507 STAM2O75886 525 aa21.63■■□□□ 1.05
TRIM56-202ENST00000412507 SEC24BO95487 1268 aa21.63■■□□□ 1.05
TRIM56-202ENST00000412507 GGPS1O95749 300 aa21.63■■□□□ 1.05
TRIM56-202ENST00000412507 CD4P01730 458 aa21.63■■□□□ 1.05
TRIM56-202ENST00000412507 FXR1P51114 621 aaKnown RBP eCLIP21.63■■□□□ 1.05
TRIM56-202ENST00000412507 LAMC2Q13753 1193 aa21.63■■□□□ 1.05
TRIM56-202ENST00000412507 NTRK3Q16288 839 aa21.63■■□□□ 1.05
TRIM56-202ENST00000412507 PFKFB3Q16875 520 aaPredicted RBP21.63■■□□□ 1.05
TRIM56-202ENST00000412507 GNPTABQ3T906 1256 aa21.63■■□□□ 1.05
TRIM56-202ENST00000412507 PCNX4Q63HM2 1172 aa21.63■■□□□ 1.05
TRIM56-202ENST00000412507 PPP1R13LQ8WUF5 828 aa21.63■■□□□ 1.05
TRIM56-202ENST00000412507 EMID1Q96A84 441 aaPredicted RBP21.63■■□□□ 1.05
TRIM56-202ENST00000412507 INPP4AQ96PE3 977 aaPredicted RBP21.63■■□□□ 1.05
TRIM56-202ENST00000412507 RIC8AQ9NPQ8 531 aa21.63■■□□□ 1.05
TRIM56-202ENST00000412507 TBX21Q9UL17 535 aa21.63■■□□□ 1.05
TRIM56-202ENST00000412507 PCDHA6Q9UN73 950 aa21.63■■□□□ 1.05
TRIM56-202ENST00000412507 PCDHA8Q9Y5H6 950 aa21.63■■□□□ 1.05
TRIM56-202ENST00000412507 SCN5AQ14524 2016 aa21.63■■□□□ 1.05
TRIM56-202ENST00000412507 SMCO2A6NFE2 343 aa21.62■■□□□ 1.05
TRIM56-202ENST00000412507 PRPF3O43395 683 aaKnown RBP21.62■■□□□ 1.05
TRIM56-202ENST00000412507 TGFB3P10600 412 aa21.62■■□□□ 1.05
TRIM56-202ENST00000412507 SCG2P13521 617 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms