RNA–Protein interactions for RNA: ENST00000411739.6

NEDD1-202, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 2,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-202ENST00000411739 PIK3CDO00329 1044 aa13.75□□□□□ -0.21
NEDD1-202ENST00000411739 LRRC26Q2I0M4 334 aa13.75□□□□□ -0.21
NEDD1-202ENST00000411739 DUSP28Q4G0W2 176 aa13.75□□□□□ -0.21
NEDD1-202ENST00000411739 KLHDC9Q8NEP7 349 aa13.75□□□□□ -0.21
NEDD1-202ENST00000411739 PPP1R13LQ8WUF5 828 aa13.75□□□□□ -0.21
NEDD1-202ENST00000411739 AP5M1Q9H0R1 490 aa13.75□□□□□ -0.21
NEDD1-202ENST00000411739 BCAS3Q9H6U6 928 aa13.75□□□□□ -0.21
NEDD1-202ENST00000411739 RBM47A0AV96 593 aaKnown RBP13.74□□□□□ -0.21
NEDD1-202ENST00000411739 EIF3JO75822 258 aaKnown RBP13.74□□□□□ -0.21
NEDD1-202ENST00000411739 CCND2P30279 289 aa13.74□□□□□ -0.21
NEDD1-202ENST00000411739 FOSBP53539 338 aa13.74□□□□□ -0.21
NEDD1-202ENST00000411739 GJA9P57773 515 aa13.74□□□□□ -0.21
NEDD1-202ENST00000411739 ST3GAL1Q11201 340 aa13.74□□□□□ -0.21
NEDD1-202ENST00000411739 TRIM22Q8IYM9 498 aa13.74□□□□□ -0.21
NEDD1-202ENST00000411739 SAMD3Q8N6K7 520 aa13.74□□□□□ -0.21
NEDD1-202ENST00000411739 SCFD2Q8WU76 684 aa13.74□□□□□ -0.21
NEDD1-202ENST00000411739 MAF1Q9H063 256 aa13.74□□□□□ -0.21
NEDD1-202ENST00000411739 LOC102724159A0A0B4J2E5 919 aa13.74□□□□□ -0.21
NEDD1-202ENST00000411739 SPDYE3A6NKU9 549 aa13.74□□□□□ -0.21
NEDD1-202ENST00000411739 PWP2Q15269 919 aaKnown RBP13.74□□□□□ -0.21
NEDD1-202ENST00000411739 OR6J1Q8NGC5 347 aa13.74□□□□□ -0.21
NEDD1-202ENST00000411739 SPC25Q9HBM1 224 aa13.74□□□□□ -0.21
NEDD1-202ENST00000411739 MRVI1Q9Y6F6 885 aa13.74□□□□□ -0.21
NEDD1-202ENST00000411739 JAK2O60674 1132 aa13.73□□□□□ -0.21
NEDD1-202ENST00000411739 ASGR1P07306 291 aa13.73□□□□□ -0.21
NEDD1-202ENST00000411739 SP2Q02086 613 aa13.73□□□□□ -0.21
NEDD1-202ENST00000411739 TTLL4Q14679 1199 aa13.73□□□□□ -0.21
NEDD1-202ENST00000411739 FSCN1Q16658 493 aaKnown RBP13.73□□□□□ -0.21
NEDD1-202ENST00000411739 CCSAPQ6IQ19 270 aaPredicted RBP13.73□□□□□ -0.21
NEDD1-202ENST00000411739 CCDC62Q6P9F0 684 aa13.73□□□□□ -0.21
NEDD1-202ENST00000411739 CPLX2Q6PUV4 134 aaKnown RBP13.73□□□□□ -0.21
NEDD1-202ENST00000411739 CXCL17Q6UXB2 119 aa13.73□□□□□ -0.21
NEDD1-202ENST00000411739 GTF3C6Q969F1 213 aa13.73□□□□□ -0.21
NEDD1-202ENST00000411739 VTI1AQ96AJ9 217 aa13.73□□□□□ -0.21
NEDD1-202ENST00000411739 TBC1D32Q96NH3 1257 aa13.73□□□□□ -0.21
NEDD1-202ENST00000411739 UPF3AQ9H1J1 476 aaKnown RBP13.73□□□□□ -0.21
NEDD1-202ENST00000411739 CD2BP2O95400 341 aaKnown RBP13.73□□□□□ -0.21
NEDD1-202ENST00000411739 ACLYP53396 1101 aa13.73□□□□□ -0.21
NEDD1-202ENST00000411739 CCDC83Q8IWF9 413 aa13.73□□□□□ -0.21
NEDD1-202ENST00000411739 C7orf61Q8IZ16 206 aa13.73□□□□□ -0.21
NEDD1-202ENST00000411739 UIMC1Q96RL1 719 aa13.73□□□□□ -0.21
NEDD1-202ENST00000411739 HTATIP2Q9BUP3 242 aa13.73□□□□□ -0.21
NEDD1-202ENST00000411739 PKD2L1Q9P0L9 805 aa13.73□□□□□ -0.21
NEDD1-202ENST00000411739 DDX41Q9UJV9 622 aaKnown RBP13.73□□□□□ -0.21
NEDD1-202ENST00000411739 KCNJ14Q9UNX9 436 aa13.73□□□□□ -0.21
NEDD1-202ENST00000411739 LIMCH1Q9UPQ0 1083 aa13.73□□□□□ -0.21
NEDD1-202ENST00000411739 A0A1W2PQ45 241 aaPredicted RBP13.72□□□□□ -0.21
NEDD1-202ENST00000411739 A0A1W2PQY0 241 aa13.72□□□□□ -0.21
NEDD1-202ENST00000411739 PPP1R18Q6NYC8 613 aa13.72□□□□□ -0.21
NEDD1-202ENST00000411739 ANO3Q9BYT9 981 aa13.72□□□□□ -0.21
NEDD1-202ENST00000411739 PHF24Q9UPV7 400 aa13.72□□□□□ -0.21
NEDD1-202ENST00000411739 hCG_1984214I3L0E3 225 aa13.72□□□□□ -0.21
NEDD1-202ENST00000411739 EVI5O60447 810 aa13.72□□□□□ -0.21
NEDD1-202ENST00000411739 DEXIO95424 95 aa13.72□□□□□ -0.21
NEDD1-202ENST00000411739 FDPSP14324 419 aaKnown RBP13.72□□□□□ -0.21
NEDD1-202ENST00000411739 NLRP5P59047 1200 aa13.72□□□□□ -0.21
NEDD1-202ENST00000411739 SLC39A5Q6ZMH5 540 aa13.72□□□□□ -0.21
NEDD1-202ENST00000411739 ZNF713Q8N859 430 aaPredicted RBP13.72□□□□□ -0.21
NEDD1-202ENST00000411739 CYP2W1Q8TAV3 490 aa13.72□□□□□ -0.21
NEDD1-202ENST00000411739 ZMYND12Q9H0C1 365 aa13.72□□□□□ -0.21
NEDD1-202ENST00000411739 C6orf50Q9HD87 102 aa13.72□□□□□ -0.21
NEDD1-202ENST00000411739 RBM27Q9P2N5 1060 aaKnown RBP13.72□□□□□ -0.21
NEDD1-202ENST00000411739 ORC3Q9UBD5 711 aaPredicted RBP13.72□□□□□ -0.21
NEDD1-202ENST00000411739 ATP11BQ9Y2G3 1177 aa13.72□□□□□ -0.21
NEDD1-202ENST00000411739 TELO2Q9Y4R8 837 aa13.72□□□□□ -0.21
NEDD1-202ENST00000411739 FRMPD4Q14CM0 1322 aa13.72□□□□□ -0.21
NEDD1-202ENST00000411739 MYL3P08590 195 aa13.71□□□□□ -0.21
NEDD1-202ENST00000411739 SYN1P17600 705 aa13.71□□□□□ -0.21
NEDD1-202ENST00000411739 CHMP4BP1P59074 171 aa13.71□□□□□ -0.21
NEDD1-202ENST00000411739 PSMC6P62333 389 aa13.71□□□□□ -0.21
NEDD1-202ENST00000411739 PCNX4Q63HM2 1172 aa13.71□□□□□ -0.21
NEDD1-202ENST00000411739 AFG1LQ8WV93 481 aa13.71□□□□□ -0.21
NEDD1-202ENST00000411739 ZMYND8Q9ULU4 1186 aaPredicted RBP13.71□□□□□ -0.21
NEDD1-202ENST00000411739 CEP290O15078 2479 aa13.71□□□□□ -0.21
NEDD1-202ENST00000411739 CLK2P49760 499 aaKnown RBP13.71□□□□□ -0.21
NEDD1-202ENST00000411739 ARHGAP1Q07960 439 aa13.71□□□□□ -0.21
NEDD1-202ENST00000411739 SEMA3FQ13275 785 aa13.71□□□□□ -0.21
NEDD1-202ENST00000411739 RABEP1Q15276 862 aa13.71□□□□□ -0.21
NEDD1-202ENST00000411739 NSUN7Q8NE18 718 aaKnown RBP13.71□□□□□ -0.21
NEDD1-202ENST00000411739 H0YGN5 161 aa13.7□□□□□ -0.22
NEDD1-202ENST00000411739 CDKL5O76039 1030 aa13.7□□□□□ -0.22
NEDD1-202ENST00000411739 CAPN2P17655 700 aa13.7□□□□□ -0.22
NEDD1-202ENST00000411739 ITGB5P18084 799 aa13.7□□□□□ -0.22
NEDD1-202ENST00000411739 RTP1P59025 263 aa13.7□□□□□ -0.22
NEDD1-202ENST00000411739 SP4Q02446 784 aa13.7□□□□□ -0.22
NEDD1-202ENST00000411739 TRIM60Q495X7 471 aa13.7□□□□□ -0.22
NEDD1-202ENST00000411739 PCSK9Q8NBP7 692 aaKnown RBP13.7□□□□□ -0.22
NEDD1-202ENST00000411739 CCDC12Q8WUD4 166 aaPredicted RBP13.7□□□□□ -0.22
NEDD1-202ENST00000411739 STARD7Q9NQZ5 370 aa13.7□□□□□ -0.22
NEDD1-202ENST00000411739 ALPK3Q96L96 1907 aa13.7□□□□□ -0.22
NEDD1-202ENST00000411739 GGPS1O95749 300 aa13.7□□□□□ -0.22
NEDD1-202ENST00000411739 GH1P01241 217 aa13.7□□□□□ -0.22
NEDD1-202ENST00000411739 UBA1P22314 1058 aaKnown RBP13.7□□□□□ -0.22
NEDD1-202ENST00000411739 CST5P28325 142 aaPredicted RBP13.7□□□□□ -0.22
NEDD1-202ENST00000411739 DHX37Q8IY37 1157 aaKnown RBP13.7□□□□□ -0.22
NEDD1-202ENST00000411739 REXO1Q8N1G1 1221 aaKnown RBP13.7□□□□□ -0.22
NEDD1-202ENST00000411739 INPP4AQ96PE3 977 aaPredicted RBP13.7□□□□□ -0.22
NEDD1-202ENST00000411739 TSEN34Q9BSV6 310 aaKnown RBP13.7□□□□□ -0.22
NEDD1-202ENST00000411739 Q9Y3F1 56 aa13.7□□□□□ -0.22
NEDD1-202ENST00000411739 KIAA1217Q5T5P2 1943 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms