RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 ZSWIM3Q96MP5 696 aa2.77□□□□□ -1.97
RNU2-55P-201ENST00000411146 WWC2-AS2Q96NR7 200 aa2.77□□□□□ -1.97
RNU2-55P-201ENST00000411146 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP2.77□□□□□ -1.97
RNU2-55P-201ENST00000411146 SUGT1Q9Y2Z0 365 aa2.77□□□□□ -1.97
RNU2-55P-201ENST00000411146 EMC9Q9Y3B6 208 aa2.77□□□□□ -1.97
RNU2-55P-201ENST00000411146 MROH6A6NGR9 719 aa2.76□□□□□ -1.97
RNU2-55P-201ENST00000411146 GPR42O15529 346 aa2.76□□□□□ -1.97
RNU2-55P-201ENST00000411146 NPHS1O60500 1241 aa2.76□□□□□ -1.97
RNU2-55P-201ENST00000411146 ZBTB7AO95365 584 aa2.76□□□□□ -1.97
RNU2-55P-201ENST00000411146 RECKO95980 971 aa2.76□□□□□ -1.97
RNU2-55P-201ENST00000411146 NASPP49321 788 aaPredicted RBP2.76□□□□□ -1.97
RNU2-55P-201ENST00000411146 SLC9A5Q14940 896 aa2.76□□□□□ -1.97
RNU2-55P-201ENST00000411146 GTF2IRD2BQ6EKJ0 949 aa2.76□□□□□ -1.97
RNU2-55P-201ENST00000411146 ETV3LQ6ZN32 361 aa2.76□□□□□ -1.97
RNU2-55P-201ENST00000411146 CEP68Q76N32 757 aa2.76□□□□□ -1.97
RNU2-55P-201ENST00000411146 GTF2IRD2Q86UP8 949 aa2.76□□□□□ -1.97
RNU2-55P-201ENST00000411146 MIB1Q86YT6 1006 aa2.76□□□□□ -1.97
RNU2-55P-201ENST00000411146 KREMEN2Q8NCW0 462 aa2.76□□□□□ -1.97
RNU2-55P-201ENST00000411146 RGS22Q8NE09 1264 aa2.76□□□□□ -1.97
RNU2-55P-201ENST00000411146 NPLOC4Q8TAT6 608 aa2.76□□□□□ -1.97
RNU2-55P-201ENST00000411146 MICAL1Q8TDZ2 1067 aa2.76□□□□□ -1.97
RNU2-55P-201ENST00000411146 CRBNQ96SW2 442 aa2.76□□□□□ -1.97
RNU2-55P-201ENST00000411146 MMP19Q99542 508 aa2.76□□□□□ -1.97
RNU2-55P-201ENST00000411146 CD248Q9HCU0 757 aa2.76□□□□□ -1.97
RNU2-55P-201ENST00000411146 ZNF536O15090 1300 aa2.75□□□□□ -1.97
RNU2-55P-201ENST00000411146 B2RBV5 119 aa2.75□□□□□ -1.97
RNU2-55P-201ENST00000411146 SMARCA5O60264 1052 aaPredicted RBP2.75□□□□□ -1.97
RNU2-55P-201ENST00000411146 LRG1P02750 347 aa2.75□□□□□ -1.97
RNU2-55P-201ENST00000411146 AMHP03971 560 aa2.75□□□□□ -1.97
RNU2-55P-201ENST00000411146 IL13P35225 146 aa2.75□□□□□ -1.97
RNU2-55P-201ENST00000411146 GRIA2P42262 883 aa2.75□□□□□ -1.97
RNU2-55P-201ENST00000411146 HDLBPQ00341 1268 aaKnown RBP2.75□□□□□ -1.97
RNU2-55P-201ENST00000411146 TRIM26Q12899 539 aaPredicted RBP2.75□□□□□ -1.97
RNU2-55P-201ENST00000411146 GRB10Q13322 594 aa2.75□□□□□ -1.97
RNU2-55P-201ENST00000411146 IGFL4Q6B9Z1 124 aa2.75□□□□□ -1.97
RNU2-55P-201ENST00000411146 VHLLQ6RSH7 139 aa2.75□□□□□ -1.97
RNU2-55P-201ENST00000411146 CABP7Q86V35 215 aa2.75□□□□□ -1.97
RNU2-55P-201ENST00000411146 RCBTB1Q8NDN9 531 aa2.75□□□□□ -1.97
RNU2-55P-201ENST00000411146 BVESQ8NE79 360 aa2.75□□□□□ -1.97
RNU2-55P-201ENST00000411146 IGDCC4Q8TDY8 1250 aa2.75□□□□□ -1.97
RNU2-55P-201ENST00000411146 BTN2A2Q8WVV5 523 aa2.75□□□□□ -1.97
RNU2-55P-201ENST00000411146 ZCCHC14Q8WYQ9 949 aaKnown RBP2.75□□□□□ -1.97
RNU2-55P-201ENST00000411146 SAMD11Q96NU1 681 aa2.75□□□□□ -1.97
RNU2-55P-201ENST00000411146 SORCS2Q96PQ0 1159 aa2.75□□□□□ -1.97
RNU2-55P-201ENST00000411146 GBP3Q9H0R5 595 aa2.75□□□□□ -1.97
RNU2-55P-201ENST00000411146 PHAXQ9H814 394 aaKnown RBP2.75□□□□□ -1.97
RNU2-55P-201ENST00000411146 ING1Q9UK53 422 aaPredicted RBP2.75□□□□□ -1.97
RNU2-55P-201ENST00000411146 ANKRD34BA5PLL1 514 aa2.74□□□□□ -1.97
RNU2-55P-201ENST00000411146 PLSCR1O15162 318 aa2.74□□□□□ -1.97
RNU2-55P-201ENST00000411146 C6P13671 934 aa2.74□□□□□ -1.97
RNU2-55P-201ENST00000411146 ZNF28P17035 718 aa2.74□□□□□ -1.97
RNU2-55P-201ENST00000411146 ECI1P42126 302 aa2.74□□□□□ -1.97
RNU2-55P-201ENST00000411146 CASP7P55210 303 aa2.74□□□□□ -1.97
RNU2-55P-201ENST00000411146 KRTAP1-1Q07627 177 aa2.74□□□□□ -1.97
RNU2-55P-201ENST00000411146 ZNF585AQ6P3V2 769 aa2.74□□□□□ -1.97
RNU2-55P-201ENST00000411146 TMC5Q6UXY8 1006 aa2.74□□□□□ -1.97
RNU2-55P-201ENST00000411146 TRIM59Q8IWR1 403 aa2.74□□□□□ -1.97
RNU2-55P-201ENST00000411146 PALM2Q8IXS6 379 aa2.74□□□□□ -1.97
RNU2-55P-201ENST00000411146 ZNF654Q8IZM8 581 aa2.74□□□□□ -1.97
RNU2-55P-201ENST00000411146 TTC9BQ8N6N2 239 aa2.74□□□□□ -1.97
RNU2-55P-201ENST00000411146 RASGRP4Q8TDF6 673 aa2.74□□□□□ -1.97
RNU2-55P-201ENST00000411146 PPP1R14AQ96A00 147 aa2.74□□□□□ -1.97
RNU2-55P-201ENST00000411146 GPRASP2Q96D09 838 aa2.74□□□□□ -1.97
RNU2-55P-201ENST00000411146 APBA2Q99767 749 aa2.74□□□□□ -1.97
RNU2-55P-201ENST00000411146 ZNF747Q9BV97 191 aa2.74□□□□□ -1.97
RNU2-55P-201ENST00000411146 NKX2-4Q9H2Z4 354 aa2.74□□□□□ -1.97
RNU2-55P-201ENST00000411146 ACBD3Q9H3P7 528 aa2.74□□□□□ -1.97
RNU2-55P-201ENST00000411146 CYP26B1Q9NR63 512 aa2.74□□□□□ -1.97
RNU2-55P-201ENST00000411146 METTL5Q9NRN9 209 aaKnown RBP2.74□□□□□ -1.97
RNU2-55P-201ENST00000411146 PPARGC1AQ9UBK2 798 aaKnown RBP2.74□□□□□ -1.97
RNU2-55P-201ENST00000411146 CROTQ9UKG9 612 aa2.74□□□□□ -1.97
RNU2-55P-201ENST00000411146 NUDT5Q9UKK9 219 aa2.74□□□□□ -1.97
RNU2-55P-201ENST00000411146 MRVI1Q9Y6F6 885 aa2.74□□□□□ -1.97
RNU2-55P-201ENST00000411146 TCRBV5S2A0A599 114 aa2.73□□□□□ -1.97
RNU2-55P-201ENST00000411146 OVOL3O00110 214 aa2.73□□□□□ -1.97
RNU2-55P-201ENST00000411146 B4GALT4O60513 344 aa2.73□□□□□ -1.97
RNU2-55P-201ENST00000411146 MSCO60682 206 aa2.73□□□□□ -1.97
RNU2-55P-201ENST00000411146 TADA3O75528 432 aa2.73□□□□□ -1.97
RNU2-55P-201ENST00000411146 CAPNS1P04632 268 aa2.73□□□□□ -1.97
RNU2-55P-201ENST00000411146 ITGAVP06756 1048 aa2.73□□□□□ -1.97
RNU2-55P-201ENST00000411146 COL6A1P12109 1028 aa2.73□□□□□ -1.97
RNU2-55P-201ENST00000411146 ACVRL1P37023 503 aa2.73□□□□□ -1.97
RNU2-55P-201ENST00000411146 R3HDM1Q15032 1099 aaKnown RBP2.73□□□□□ -1.97
RNU2-55P-201ENST00000411146 MRM1Q6IN84 353 aaKnown RBP2.73□□□□□ -1.97
RNU2-55P-201ENST00000411146 GLB1LQ6UWU2 654 aa2.73□□□□□ -1.97
RNU2-55P-201ENST00000411146 C6orf15Q6UXA7 325 aaPredicted RBP2.73□□□□□ -1.97
RNU2-55P-201ENST00000411146 PROSER1Q86XN7 944 aa2.73□□□□□ -1.97
RNU2-55P-201ENST00000411146 NT5DC4Q86YG4 428 aa2.73□□□□□ -1.97
RNU2-55P-201ENST00000411146 FAM126BQ8IXS8 530 aa2.73□□□□□ -1.97
RNU2-55P-201ENST00000411146 LGI4Q8N135 537 aa2.73□□□□□ -1.97
RNU2-55P-201ENST00000411146 C19orf47Q8N9M1 422 aaKnown RBP2.73□□□□□ -1.97
RNU2-55P-201ENST00000411146 CHST13Q8NET6 341 aa2.73□□□□□ -1.97
RNU2-55P-201ENST00000411146 NUDT10Q8NFP7 164 aa2.73□□□□□ -1.97
RNU2-55P-201ENST00000411146 DNERQ8NFT8 737 aa2.73□□□□□ -1.97
RNU2-55P-201ENST00000411146 CLEC4DQ8WXI8 215 aa2.73□□□□□ -1.97
RNU2-55P-201ENST00000411146 ANAPC16Q96DE5 110 aa2.73□□□□□ -1.97
RNU2-55P-201ENST00000411146 NUDT11Q96G61 164 aa2.73□□□□□ -1.97
RNU2-55P-201ENST00000411146 TRMT2BQ96GJ1 504 aaKnown RBP2.73□□□□□ -1.97
RNU2-55P-201ENST00000411146 LCORQ96JN0 433 aaPredicted RBP2.73□□□□□ -1.97
RNU2-55P-201ENST00000411146 YTHDC1Q96MU7 727 aaKnown RBP2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms