RNA–Protein interactions for RNA: ENST00000411042.1

RN7SKP228-201, Transcript of RNA, 7SK small nuclear pseudogene 228, humanhuman

BASIC

Gene RN7SKP228, Length 263 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP228-201ENST00000411042 KRT79Q5XKE5 535 aa11.89□□□□□ -0.51
RN7SKP228-201ENST00000411042 XRRA1Q6P2D8 792 aa11.89□□□□□ -0.51
RN7SKP228-201ENST00000411042 FOXR2Q6PJQ5 311 aa11.89□□□□□ -0.51
RN7SKP228-201ENST00000411042 USP17L6PQ6QN14 398 aa11.89□□□□□ -0.51
RN7SKP228-201ENST00000411042 ZSCAN30Q86W11 494 aa11.89□□□□□ -0.51
RN7SKP228-201ENST00000411042 LDHDQ86WU2 507 aa11.89□□□□□ -0.51
RN7SKP228-201ENST00000411042 FAM43AQ8N2R8 423 aa11.89□□□□□ -0.51
RN7SKP228-201ENST00000411042 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.89□□□□□ -0.51
RN7SKP228-201ENST00000411042 TMC2Q8TDI7 906 aa11.89□□□□□ -0.51
RN7SKP228-201ENST00000411042 HAS1Q92839 578 aa11.89□□□□□ -0.51
RN7SKP228-201ENST00000411042 DCPSQ96C86 337 aaKnown RBP11.89□□□□□ -0.51
RN7SKP228-201ENST00000411042 WRNIP1Q96S55 665 aa11.89□□□□□ -0.51
RN7SKP228-201ENST00000411042 C7orf25Q9BPX7 421 aa11.89□□□□□ -0.51
RN7SKP228-201ENST00000411042 TTC12Q9H892 705 aaPredicted RBP11.89□□□□□ -0.51
RN7SKP228-201ENST00000411042 EMILIN3Q9NT22 766 aa11.89□□□□□ -0.51
RN7SKP228-201ENST00000411042 RNF181Q9P0P0 153 aa11.89□□□□□ -0.51
RN7SKP228-201ENST00000411042 TRPC6Q9Y210 931 aa11.89□□□□□ -0.51
RN7SKP228-201ENST00000411042 POLR2AP24928 1970 aaKnown RBP11.88□□□□□ -0.51
RN7SKP228-201ENST00000411042 SCN4AP35499 1836 aa11.88□□□□□ -0.51
RN7SKP228-201ENST00000411042 PVALEFA0A1B0GWK0 134 aa11.88□□□□□ -0.51
RN7SKP228-201ENST00000411042 TTLL13PA6NNM8 815 aa11.88□□□□□ -0.51
RN7SKP228-201ENST00000411042 PPP1R12BO60237 982 aaPredicted RBP11.88□□□□□ -0.51
RN7SKP228-201ENST00000411042 RHOBTB3O94955 611 aa11.88□□□□□ -0.51
RN7SKP228-201ENST00000411042 TDP2O95551 362 aa11.88□□□□□ -0.51
RN7SKP228-201ENST00000411042 BCRP11274 1271 aa11.88□□□□□ -0.51
RN7SKP228-201ENST00000411042 INPP5BP32019 993 aa11.88□□□□□ -0.51
RN7SKP228-201ENST00000411042 TECP42680 631 aa11.88□□□□□ -0.51
RN7SKP228-201ENST00000411042 C1QTNF8P60827 252 aa11.88□□□□□ -0.51
RN7SKP228-201ENST00000411042 ZNF658Q5TYW1 1059 aaPredicted RBP11.88□□□□□ -0.51
RN7SKP228-201ENST00000411042 C9orf131Q5VYM1 1079 aa11.88□□□□□ -0.51
RN7SKP228-201ENST00000411042 KRT26Q7Z3Y9 468 aa11.88□□□□□ -0.51
RN7SKP228-201ENST00000411042 SULF1Q8IWU6 871 aa11.88□□□□□ -0.51
RN7SKP228-201ENST00000411042 AOPEPQ8N6M6 819 aa11.88□□□□□ -0.51
RN7SKP228-201ENST00000411042 ERMNQ8TAM6 284 aa11.88□□□□□ -0.51
RN7SKP228-201ENST00000411042 KIFC2Q96AC6 838 aa11.88□□□□□ -0.51
RN7SKP228-201ENST00000411042 MMTAG2Q9BU76 263 aaKnown RBP11.88□□□□□ -0.51
RN7SKP228-201ENST00000411042 TRIM5Q9C035 493 aa11.88□□□□□ -0.51
RN7SKP228-201ENST00000411042 IMPACTQ9P2X3 320 aa11.88□□□□□ -0.51
RN7SKP228-201ENST00000411042 ZNF536O15090 1300 aa11.87□□□□□ -0.51
RN7SKP228-201ENST00000411042 ASTN2O75129 1339 aaPredicted RBP11.87□□□□□ -0.51
RN7SKP228-201ENST00000411042 IQCA1LA6NCM1 817 aa11.87□□□□□ -0.51
RN7SKP228-201ENST00000411042 ESPNB1AK53 854 aa11.87□□□□□ -0.51
RN7SKP228-201ENST00000411042 CBFA2T2O43439 604 aa11.87□□□□□ -0.51
RN7SKP228-201ENST00000411042 SLC37A4O43826 429 aa11.87□□□□□ -0.51
RN7SKP228-201ENST00000411042 DDNO94850 711 aaPredicted RBP11.87□□□□□ -0.51
RN7SKP228-201ENST00000411042 RPN1P04843 607 aaKnown RBP11.87□□□□□ -0.51
RN7SKP228-201ENST00000411042 VCAM1P19320 739 aa11.87□□□□□ -0.51
RN7SKP228-201ENST00000411042 BMP6P22004 513 aa11.87□□□□□ -0.51
RN7SKP228-201ENST00000411042 TXKP42681 527 aa11.87□□□□□ -0.51
RN7SKP228-201ENST00000411042 MAP3K9P80192 1104 aa11.87□□□□□ -0.51
RN7SKP228-201ENST00000411042 FOXK1P85037 733 aa11.87□□□□□ -0.51
RN7SKP228-201ENST00000411042 SETQ01105 290 aaPredicted RBP11.87□□□□□ -0.51
RN7SKP228-201ENST00000411042 SPP2Q13103 211 aa11.87□□□□□ -0.51
RN7SKP228-201ENST00000411042 DSG2Q14126 1118 aa11.87□□□□□ -0.51
RN7SKP228-201ENST00000411042 KARSQ15046 597 aaKnown RBP11.87□□□□□ -0.51
RN7SKP228-201ENST00000411042 TMEM119Q4V9L6 283 aa11.87□□□□□ -0.51
RN7SKP228-201ENST00000411042 HAUS3Q68CZ6 603 aa11.87□□□□□ -0.51
RN7SKP228-201ENST00000411042 ETNPPLQ8TBG4 499 aa11.87□□□□□ -0.51
RN7SKP228-201ENST00000411042 HOXC10Q9NYD6 342 aa11.87□□□□□ -0.51
RN7SKP228-201ENST00000411042 AFG3L2Q9Y4W6 797 aa11.87□□□□□ -0.51
RN7SKP228-201ENST00000411042 PHIPQ8WWQ0 1821 aa11.87□□□□□ -0.51
RN7SKP228-201ENST00000411042 FRMPD4Q14CM0 1322 aa11.86□□□□□ -0.51
RN7SKP228-201ENST00000411042 GLTPD2A6NH11 291 aa11.86□□□□□ -0.51
RN7SKP228-201ENST00000411042 BIN1O00499 593 aa11.86□□□□□ -0.51
RN7SKP228-201ENST00000411042 CXCL11O14625 94 aa11.86□□□□□ -0.51
RN7SKP228-201ENST00000411042 FOXN1O15353 648 aa11.86□□□□□ -0.51
RN7SKP228-201ENST00000411042 MARCH6O60337 910 aa11.86□□□□□ -0.51
RN7SKP228-201ENST00000411042 USP2O75604 605 aaPredicted RBP11.86□□□□□ -0.51
RN7SKP228-201ENST00000411042 YBX3P16989 372 aaKnown RBP eCLIP11.86□□□□□ -0.51
RN7SKP228-201ENST00000411042 PLCG1P19174 1290 aa11.86□□□□□ -0.51
RN7SKP228-201ENST00000411042 NF2P35240 595 aa11.86□□□□□ -0.51
RN7SKP228-201ENST00000411042 AFMP43652 599 aa11.86□□□□□ -0.51
RN7SKP228-201ENST00000411042 IREB2P48200 963 aaKnown RBP11.86□□□□□ -0.51
RN7SKP228-201ENST00000411042 PSMD2Q13200 908 aa11.86□□□□□ -0.51
RN7SKP228-201ENST00000411042 STIM1Q13586 685 aa11.86□□□□□ -0.51
RN7SKP228-201ENST00000411042 MTMR2Q13614 643 aa11.86□□□□□ -0.51
RN7SKP228-201ENST00000411042 CUL4BQ13620 913 aa11.86□□□□□ -0.51
RN7SKP228-201ENST00000411042 COG2Q14746 738 aa11.86□□□□□ -0.51
RN7SKP228-201ENST00000411042 USH1GQ495M9 461 aa11.86□□□□□ -0.51
RN7SKP228-201ENST00000411042 SPATA1Q5VX52 437 aa11.86□□□□□ -0.51
RN7SKP228-201ENST00000411042 SV2BQ7L1I2 683 aa11.86□□□□□ -0.51
RN7SKP228-201ENST00000411042 PNMA8AQ86V59 439 aaPredicted RBP11.86□□□□□ -0.51
RN7SKP228-201ENST00000411042 RASSF8Q8NHQ8 419 aa11.86□□□□□ -0.51
RN7SKP228-201ENST00000411042 ERCC4Q92889 916 aaPredicted RBP11.86□□□□□ -0.51
RN7SKP228-201ENST00000411042 LENG9Q96B70 501 aa11.86□□□□□ -0.51
RN7SKP228-201ENST00000411042 CDK5RAP3Q96JB5 506 aa11.86□□□□□ -0.51
RN7SKP228-201ENST00000411042 MTRQ99707 1265 aa11.86□□□□□ -0.51
RN7SKP228-201ENST00000411042 GLIS2Q9BZE0 524 aaPredicted RBP11.86□□□□□ -0.51
RN7SKP228-201ENST00000411042 TRIM9Q9C026 710 aa11.86□□□□□ -0.51
RN7SKP228-201ENST00000411042 TMOD4Q9NZQ9 345 aa11.86□□□□□ -0.51
RN7SKP228-201ENST00000411042 CCPG1Q9ULG6 757 aa11.86□□□□□ -0.51
RN7SKP228-201ENST00000411042 ZKSCAN5Q9Y2L8 839 aa11.86□□□□□ -0.51
RN7SKP228-201ENST00000411042 SMCHD1A6NHR9 2005 aa11.86□□□□□ -0.51
RN7SKP228-201ENST00000411042 PARP14Q460N5 1801 aa11.86□□□□□ -0.51
RN7SKP228-201ENST00000411042 RPTORQ8N122 1335 aa11.86□□□□□ -0.51
RN7SKP228-201ENST00000411042 MEIS1O00470 390 aa11.85□□□□□ -0.51
RN7SKP228-201ENST00000411042 VWA5AO00534 786 aa11.85□□□□□ -0.51
RN7SKP228-201ENST00000411042 AP5Z1O43299 807 aa11.85□□□□□ -0.51
RN7SKP228-201ENST00000411042 FLOT1O75955 427 aa11.85□□□□□ -0.51
RN7SKP228-201ENST00000411042 PTMAP06454 111 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms