RNA–Protein interactions for RNA: ENST00000409938.5

EPHA4-203, Transcript of EPH receptor A4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene EPHA4, Length 3,363 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-203ENST00000409938 RRP36Q96EU6 259 aaKnown RBP8.69□□□□□ -1.02
EPHA4-203ENST00000409938 EEF2KMTQ96G04 330 aa8.69□□□□□ -1.02
EPHA4-203ENST00000409938 C6orf50Q9HD87 102 aa8.69□□□□□ -1.02
EPHA4-203ENST00000409938 GDF3Q9NR23 364 aa8.69□□□□□ -1.02
EPHA4-203ENST00000409938 RNF216Q9NWF9 866 aaPredicted RBP8.69□□□□□ -1.02
EPHA4-203ENST00000409938 PCDHA2Q9Y5H9 948 aa8.69□□□□□ -1.02
EPHA4-203ENST00000409938 GOLGA6BA6NDN3 693 aa8.69□□□□□ -1.02
EPHA4-203ENST00000409938 TLR2O60603 784 aa8.69□□□□□ -1.02
EPHA4-203ENST00000409938 USO1O60763 962 aaKnown RBP8.69□□□□□ -1.02
EPHA4-203ENST00000409938 LDHBP07195 334 aaKnown RBP8.69□□□□□ -1.02
EPHA4-203ENST00000409938 GOLGA8HP0CJ92 632 aa8.69□□□□□ -1.02
EPHA4-203ENST00000409938 MYBP10242 640 aa8.69□□□□□ -1.02
EPHA4-203ENST00000409938 IRAK1P51617 712 aa8.69□□□□□ -1.02
EPHA4-203ENST00000409938 NAPAP54920 295 aa8.69□□□□□ -1.02
EPHA4-203ENST00000409938 GSTO1P78417 241 aa8.69□□□□□ -1.02
EPHA4-203ENST00000409938 SPA17Q15506 151 aa8.69□□□□□ -1.02
EPHA4-203ENST00000409938 ALS2CLQ60I27 953 aa8.69□□□□□ -1.02
EPHA4-203ENST00000409938 NFRKBQ6P4R8 1299 aa8.69□□□□□ -1.02
EPHA4-203ENST00000409938 SV2BQ7L1I2 683 aa8.69□□□□□ -1.02
EPHA4-203ENST00000409938 C2CD5Q86YS7 1000 aa8.69□□□□□ -1.02
EPHA4-203ENST00000409938 CERS3Q8IU89 383 aa8.69□□□□□ -1.02
EPHA4-203ENST00000409938 TSEN2Q8NCE0 465 aaKnown RBP8.69□□□□□ -1.02
EPHA4-203ENST00000409938 MTMR8Q96EF0 704 aa8.69□□□□□ -1.02
EPHA4-203ENST00000409938 NLRP3Q96P20 1036 aa8.69□□□□□ -1.02
EPHA4-203ENST00000409938 EFCC1Q9HA90 598 aa8.69□□□□□ -1.02
EPHA4-203ENST00000409938 MKNK2Q9HBH9 465 aa8.69□□□□□ -1.02
EPHA4-203ENST00000409938 SLC39A2Q9NP94 309 aa8.69□□□□□ -1.02
EPHA4-203ENST00000409938 JADE2Q9NQC1 790 aa8.69□□□□□ -1.02
EPHA4-203ENST00000409938 GPR75-ASB3A0A0A6YYF3 556 aa8.69□□□□□ -1.02
EPHA4-203ENST00000409938 IGKV6D-41A0A0C4DH26 115 aa8.69□□□□□ -1.02
EPHA4-203ENST00000409938 GOLGA8KD6RF30 607 aa8.69□□□□□ -1.02
EPHA4-203ENST00000409938 SLC37A4O43826 429 aa8.69□□□□□ -1.02
EPHA4-203ENST00000409938 ZBTB48P10074 688 aaPredicted RBP8.69□□□□□ -1.02
EPHA4-203ENST00000409938 TNNT3P45378 269 aaPredicted RBP8.69□□□□□ -1.02
EPHA4-203ENST00000409938 CDK8P49336 464 aa8.69□□□□□ -1.02
EPHA4-203ENST00000409938 CCDC96Q2M329 555 aa8.69□□□□□ -1.02
EPHA4-203ENST00000409938 GBP6Q6ZN66 633 aa8.69□□□□□ -1.02
EPHA4-203ENST00000409938 SLC51AQ86UW1 340 aa8.69□□□□□ -1.02
EPHA4-203ENST00000409938 C10orf67Q8IYJ2 551 aa8.69□□□□□ -1.02
EPHA4-203ENST00000409938 MREGQ8N565 214 aa8.69□□□□□ -1.02
EPHA4-203ENST00000409938 C1orf131Q8NDD1 294 aaKnown RBP8.69□□□□□ -1.02
EPHA4-203ENST00000409938 FAM163AQ96GL9 167 aaPredicted RBP8.69□□□□□ -1.02
EPHA4-203ENST00000409938 RIC8AQ9NPQ8 531 aa8.69□□□□□ -1.02
EPHA4-203ENST00000409938 PODXL2Q9NZ53 605 aa8.69□□□□□ -1.02
EPHA4-203ENST00000409938 STIM2Q9P246 746 aa8.69□□□□□ -1.02
EPHA4-203ENST00000409938 RNF14Q9UBS8 474 aa8.69□□□□□ -1.02
EPHA4-203ENST00000409938 LEMD3Q9Y2U8 911 aa8.69□□□□□ -1.02
EPHA4-203ENST00000409938 IPO7O95373 1038 aaKnown RBP8.68□□□□□ -1.02
EPHA4-203ENST00000409938 EPHB4P54760 987 aa8.68□□□□□ -1.02
EPHA4-203ENST00000409938 PPFIA1Q13136 1202 aa8.68□□□□□ -1.02
EPHA4-203ENST00000409938 TTMPQ5BVD1 217 aa8.68□□□□□ -1.02
EPHA4-203ENST00000409938 PPP4R3AQ6IN85 833 aa8.68□□□□□ -1.02
EPHA4-203ENST00000409938 KCNK18Q7Z418 384 aa8.68□□□□□ -1.02
EPHA4-203ENST00000409938 RASSF8Q8NHQ8 419 aa8.68□□□□□ -1.02
EPHA4-203ENST00000409938 LARP4BQ92615 738 aaKnown RBP8.68□□□□□ -1.02
EPHA4-203ENST00000409938 TRIM34Q9BYJ4 488 aa8.68□□□□□ -1.02
EPHA4-203ENST00000409938 CPVLQ9H3G5 476 aa8.68□□□□□ -1.02
EPHA4-203ENST00000409938 ATXN2Q99700 1313 aaKnown RBP8.68□□□□□ -1.02
EPHA4-203ENST00000409938 BTNL10A8MVZ5 291 aa8.68□□□□□ -1.02
EPHA4-203ENST00000409938 PES1O00541 588 aaKnown RBP8.68□□□□□ -1.02
EPHA4-203ENST00000409938 RHBDL3P58872 404 aa8.68□□□□□ -1.02
EPHA4-203ENST00000409938 SEPT2Q15019 361 aa8.68□□□□□ -1.02
EPHA4-203ENST00000409938 DIXDC1Q155Q3 683 aa8.68□□□□□ -1.02
EPHA4-203ENST00000409938 ECM1Q16610 540 aa8.68□□□□□ -1.02
EPHA4-203ENST00000409938 CD302Q8IX05 232 aa8.68□□□□□ -1.02
EPHA4-203ENST00000409938 IQCKQ8N0W5 287 aa8.68□□□□□ -1.02
EPHA4-203ENST00000409938 ZNF444Q8N0Y2 327 aaPredicted RBP8.68□□□□□ -1.02
EPHA4-203ENST00000409938 GLIS3Q8NEA6 775 aa8.68□□□□□ -1.02
EPHA4-203ENST00000409938 TGFBRAP1Q8WUH2 860 aa8.68□□□□□ -1.02
EPHA4-203ENST00000409938 PIK3R5Q8WYR1 880 aa8.68□□□□□ -1.02
EPHA4-203ENST00000409938 ZBTB9Q96C00 473 aa8.68□□□□□ -1.02
EPHA4-203ENST00000409938 CALML4Q96GE6 196 aa8.68□□□□□ -1.02
EPHA4-203ENST00000409938 NUDT12Q9BQG2 462 aa8.68□□□□□ -1.02
EPHA4-203ENST00000409938 CRACR2AQ9BSW2 395 aa8.68□□□□□ -1.02
EPHA4-203ENST00000409938 TMEM260Q9NX78 707 aa8.68□□□□□ -1.02
EPHA4-203ENST00000409938 TMEM59LQ9UK28 342 aa8.68□□□□□ -1.02
EPHA4-203ENST00000409938 PCDHGC5Q9Y5F6 944 aa8.68□□□□□ -1.02
EPHA4-203ENST00000409938 ATP8B3O60423 1300 aa8.68□□□□□ -1.02
EPHA4-203ENST00000409938 FGFR1OPO95684 399 aaKnown RBP8.67□□□□□ -1.02
EPHA4-203ENST00000409938 BAG3O95817 575 aa8.67□□□□□ -1.02
EPHA4-203ENST00000409938 SLC4A8Q2Y0W8 1093 aa8.67□□□□□ -1.02
EPHA4-203ENST00000409938 USP17L2Q6R6M4 530 aa8.67□□□□□ -1.02
EPHA4-203ENST00000409938 PACS2Q86VP3 889 aa8.67□□□□□ -1.02
EPHA4-203ENST00000409938 REXO1Q8N1G1 1221 aaKnown RBP8.67□□□□□ -1.02
EPHA4-203ENST00000409938 FAM76AQ8TAV0 307 aa8.67□□□□□ -1.02
EPHA4-203ENST00000409938 CAGE1Q8TC20 777 aa8.67□□□□□ -1.02
EPHA4-203ENST00000409938 PIGSQ96S52 555 aa8.67□□□□□ -1.02
EPHA4-203ENST00000409938 EYA3Q99504 573 aa8.67□□□□□ -1.02
EPHA4-203ENST00000409938 FAM207AQ9NSI2 230 aaPredicted RBP8.67□□□□□ -1.02
EPHA4-203ENST00000409938 RBM12Q9NTZ6 932 aaKnown RBP8.67□□□□□ -1.02
EPHA4-203ENST00000409938 CEP72Q9P209 647 aa8.67□□□□□ -1.02
EPHA4-203ENST00000409938 TSKSQ9UJT2 592 aa8.67□□□□□ -1.02
EPHA4-203ENST00000409938 NENFQ9UMX5 172 aa8.67□□□□□ -1.02
EPHA4-203ENST00000409938 GAKO14976 1311 aa8.67□□□□□ -1.02
EPHA4-203ENST00000409938 GOLGA6CA6NDK9 693 aa8.67□□□□□ -1.02
EPHA4-203ENST00000409938 CES2O00748 559 aa8.67□□□□□ -1.02
EPHA4-203ENST00000409938 EIF3HO15372 352 aaKnown RBP eCLIP8.67□□□□□ -1.02
EPHA4-203ENST00000409938 RPS6KA4O75676 772 aa8.67□□□□□ -1.02
EPHA4-203ENST00000409938 GOLGA6DP0CG33 693 aa8.67□□□□□ -1.02
EPHA4-203ENST00000409938 IL1R1P14778 569 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms